Taea005483.1
Basic Information
- Insect
- Troides aeacus
- Gene Symbol
- lrrfip2
- Assembly
- GCA_033220335.2
- Location
- CM067273.1:1277761-1284111[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.3e-76 1.8e-71 241.6 23.8 1 268 25 291 25 310 0.87 2 2 1 2.8e+04 -7.7 19.6 1 48 311 357 311 384 0.68
Sequence Information
- Coding Sequence
- ATGAAACCGATACAATTAAATCTGACAAGTTCTCCTGTGGACAACGAGATATCCTCATCACCACCCACTAAAGCGGAGCAGCGGctggcggcgcggcgggcggcgcgtgcGGAGGCCCGCGAGATACGCATGCGCGAACTGGAGCGGCAGCAGCGCGAACAGGAGGACCATGCGGATAAAGCGTTCGACATGTACTCAGAGACAGTGGGGCGCCGAGGGGGTCGGCTAGCAGCCCTCAGTCCCTCCATGCACTCGCCCCGACGCAGCTCCGAAGATTCCGCCGAAGATGTCTTTAGCATCAAAGACCTTAGGCACGAGCTGAAAGAAGTGGAGGAGAAGTTTCGCAAGGCGATGATCCTAAATGCCCAGCTCGATAATGACAAAGCGGCGCTCGGCTATCAGCTGGAACTGCTAAAGGACAGGATAGAGGAACTGCACGAAGAACACGCGCAACTGCAGCGTGAACACAAGGAGAAGTGCTCCGCCCACGAGCGCCTGAAGCGCGAGCACGCGTCGCTGGAGCGCGAGGTGGGCGCGGCGAGGGatgcggtgcgcgcgcgcgacTCCGCGGCTGCGGCCGCGGGCTTCGCCTTCGTTGAGGCGGAACTCAGTGGGGAGACGGTGGATGGCGATGCGGCCGTGGTCTCGCAGGGCTTCGGCAGCGTACCGCCCCTCGCGCTCGTCTCTCACCACTCGGAGCAGCTGCTTAACGACGCAGGCGAAGGCACGCTGGACGTGCGGTTGCAGCGGCTGGTGAGCTCCAAGCAGGCGCTCGAGTCTGAGGTGCGGAAGCTGAAGCTCTGCCTTAATGAGGAAAGAGCAGCGCGGCAGAACGGCGTCGCATCGCACCACGACAGAGAGCATGACAGCGAGTTGGAATCTCTGCGCAAATCGGTAGCAGAGGCGAAGGGTCGGGCAGCGCGGGCGGAGGCGGAAGCGGCGCTGCAGGCGGCCGCTGTGGCACGTCTCGAGGCGCAGGTAGCCAGGCTGCGCGCGCGTCAGGAACACCAGGACGAACACGAGGAGCAGCTCAAGCAGGAGCGCCGCCGTTTGCAGAGAGAGGCCCGAGAAGCTCTCAACCGAGTAGAAGAGTTGGAAACGGAAAACAGTCACTTGACGAAGCGCCTGGATAAATTGAAGAACGCCAAGTCTGCGCTTCTGAAGGAGCTGTGA
- Protein Sequence
- MKPIQLNLTSSPVDNEISSSPPTKAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAFDMYSETVGRRGGRLAALSPSMHSPRRSSEDSAEDVFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEHAQLQREHKEKCSAHERLKREHASLEREVGAARDAVRARDSAAAAAGFAFVEAELSGETVDGDAAVVSQGFGSVPPLALVSHHSEQLLNDAGEGTLDVRLQRLVSSKQALESEVRKLKLCLNEERAARQNGVASHHDREHDSELESLRKSVAEAKGRAARAEAEAALQAAAVARLEAQVARLRARQEHQDEHEEQLKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00651756;
- 90% Identity
- iTF_01140213;
- 80% Identity
- -