Hgla021855.1
Basic Information
- Insect
- Hebomoia glaucippe
- Gene Symbol
- lrrfip2
- Assembly
- GCA_025727935.1
- Location
- JAOSYY010026140.1:99-7514[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.3e-79 1.1e-74 251.7 24.3 1 297 1 279 1 281 0.90 2 2 0.14 3.1e+03 -2.6 8.6 1 39 278 316 278 337 0.86
Sequence Information
- Coding Sequence
- GCAGAACAGCGGTTGGCTGCGCGACGGGCTGCGAGGGCGGAGGCCCGCGAGATTCGCATGCGAGAGCTGGAGAGGCAGCAAAGGGAACAGGAAGATCATGCGGACAAGGCCTACGACATGTACGCTGAAACTGTGGGACGTCGCGGTGGAACCAGGCTAGCCTCGCTAAGTCCAGCCGGTTTGCACTCGCCGAGAAGGAGTTCCGAGGACTCCGATGAAGTGCTCAGTATTAAGGATCTGAGGCACGAATTGAAAGAGGTAGAAGAGAAATTTCGTAAAGCGATGATACTGAACGCTCAGTTGGACAACGACAAGGCGGCGCTCGGATATCAGCTGGAGCTACTCAAAGATAGGATAGAAGAATTGCAAGAGGAGTACGCGCAATTACAGCGCGAACATAAAGAGAAGTGCTCGGCGCACGAACGCTTGAAACGCGACCACGCTACACTGGAGCGCGAGTTGAGTTGCGCCCGGGATGCGGTGCGAGCGCGAGACGCGGCTGTCGAGGGCGCGGGCTTCGCCTTCGTCGAGTCCGGTGATGCGCAAGCGCAGGGCTTTGGAGCTGTGCCGCCGCTGGCGCTGGTCTCGCACCAGTCTCAGGCACTGCTCGAAGATGGAGGCGAAGGGACCCTCGATGTCCGGTTGCAAAATTTAGTGAGCTCCAAGCAGGCCTTGGAGTCTGAAGTGCGAAAGTTGAAGCTGCAATTGAACGAAGAGCGTGCTGCCAGACAAAATGGCGTCGCGGCGCATCACGATAAAGATTACGAAAATGAACTGGAAACATTACGAAAGTCGGTATCGGATGCAAAAGGGCGTGCTGCGCGGGCTGAAGCGGAGGCCGCTCTACAAGCCGGAGCTGTCGCCAGGCTTGAAGCGCAAGTGCAAAGGCTGCGCGCGCGCCAGGACCACCAAGACGAGCACGAAGAGATGCTCAAACAGGAGAGACGGCGGTTGCAGAGAGAGGTGATTTTTTTTATAACTGTCGTCGATAGGCGGGCTGAAGTCCACTTGATAGTGGATCAGCCAACTGGTATCATCGATAATGCGCAACCGAACtatacagagtgtttggggcccgctcccgaaaacgaagacgggtactaa
- Protein Sequence
- AEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRGGTRLASLSPAGLHSPRRSSEDSDEVLSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELQEEYAQLQREHKEKCSAHERLKRDHATLERELSCARDAVRARDAAVEGAGFAFVESGDAQAQGFGAVPPLALVSHQSQALLEDGGEGTLDVRLQNLVSSKQALESEVRKLKLQLNEERAARQNGVAAHHDKDYENELETLRKSVSDAKGRAARAEAEAALQAGAVARLEAQVQRLRARQDHQDEHEEMLKQERRRLQREVIFFITVVDRRAEVHLIVDQPTGIIDNAQPNYTECLGPAPENEDGY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00651756;
- 90% Identity
- iTF_01204913;
- 80% Identity
- -