Pgig014196.1
Basic Information
- Insect
- Papilio gigon
- Gene Symbol
- lrrfip2
- Assembly
- GCA_027563995.1
- Location
- JAODUI010000027.1:777821-781502[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-73 2.1e-69 234.3 26.7 1 297 36 328 36 330 0.84 2 2 1 2e+04 -7.1 16.9 1 48 327 373 327 401 0.67
Sequence Information
- Coding Sequence
- ATGACTTCCACGGTGTGCGGTCTGCCGTCGAGATCCGACGACTCCCCGCCGACCGCACTCAACTTAGTTATCATTAATTTAATCATTGTTGCTCGCCACCAGCTGGCGGAGCAGCGGCTGGCGGCGCGGCGCGCGGCGCGGGCCGAGGCGCGCGAGATCCGCATGCGCGAGTTGGAGCGGCAGCAGCGCGAGCAGGAGGACCATGCCGACAAGGCATTCGATATGTACTCAGAGACAGTGGGCCGACGCGGCGGGCGGCTGGCGGCGCTCAGCCCCGCCGTGCACTCGCCGCGGCGCAGCTCCGAGGACTCCGCGGACGACGTCTTCAGTATCAAAGACCTCAGGCACGAGCTGAAGGAGGTGGAGGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTGGACAACGATAAGGCGGCGCTCGGCTACCAGCTCGAGTTGCTCAAGGACCGCATCGAGGAGCTCACCGAGGAACACGCGCAGCTGCAGCGTGAACATAAAGAGAAATGCTCCGCGCACGAGCGGTTGAAACGTGAGCACGCCACCGTGGAGCGCGAGGTGACGGCGGCGCGGGACGCCGTGCGCGCGCGGGACTCCGCCGCCGCGGCTGCGGGCTTCGCCTTCGTCGAGGCCGAACTCAACGGCACCGCGGAGAAGGCGGAGATGAACGGTGTGGAGCCCGAGCTCGTGGCGCAGGGTTTCGGCAGCGTGCCCCCCCTGGCGCTCGTCTCACACCACTCGGAGCAGCTGCTCAATGACGCCGGAGAAGGGACACTAGACGTGCGGTTGCAGCGGCTGGTGAGCTCTAAGCAGGCGCTGGAGTCGGAGGTGCGCAAGCTGAAGCTGTGCCTCAACGAGGAGCGCGCCGCGCGGCAGAACGGCGTCGCCGCGCACCACGACCGGGAGCTCGACAGCGAGCTGGAATCGCTGCGCAAGTCGGTGTCGGAGGCGAAAGGGCGCGCGGCGCGGGCGGAGGCAGAGGCGGCGCTGCAGGCGGCGGCCGTGGCGCGCCTGGAGGCGCAGGTGGCCCGTCTGCGCGCGCGCCAGGACCACCAGGACGAGCACGAGGACCAGCTCAAACAGGAGCGCCGCCGGCTGCAGAGGGAGGCTAGAGAAGCTCTGAACAGAGTCGAGGAGTTGGAAACAGAGAACAGTCACTTGACGAAGCGGCTCGACAAACTCAAGAACGCCAAGTCCGCGCTGCTCAAGGACCTGTGA
- Protein Sequence
- MTSTVCGLPSRSDDSPPTALNLVIINLIIVARHQLAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAFDMYSETVGRRGGRLAALSPAVHSPRRSSEDSADDVFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELTEEHAQLQREHKEKCSAHERLKREHATVEREVTAARDAVRARDSAAAAAGFAFVEAELNGTAEKAEMNGVEPELVAQGFGSVPPLALVSHHSEQLLNDAGEGTLDVRLQRLVSSKQALESEVRKLKLCLNEERAARQNGVAAHHDRELDSELESLRKSVSEAKGRAARAEAEAALQAAAVARLEAQVARLRARQDHQDEHEDQLKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00651756;
- 90% Identity
- iTF_01140213;
- 80% Identity
- -