Pmem009230.1
Basic Information
- Insect
- Papilio memnon
- Gene Symbol
- lrrfip2
- Assembly
- GCA_003118335.3
- Location
- JAOPJP010000027.1:840417-844322[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-74 4.9e-70 236.5 26.8 1 297 28 320 28 322 0.84 2 2 1 2.3e+04 -7.1 18.0 1 48 319 365 319 392 0.70
Sequence Information
- Coding Sequence
- ATGCAGGTTATAATTTTGCAGACAAAAAGTAATATAAAGGAGATATATCAAGAAAGGTCTTACGCCTTATTGGTCTTAAAAGCGGAGCAGCGTCTGGCGGCGCGGCGCGCGGCGCGGGCGGAGGCGCGAGAGATCCGCATGCGGGAGCTGGAGCGGCAGCAGCGCGAGCAGGAGGACCATGCCGACAAGGCATTCGACATgtactcagAGACAGTGGGTCGTCGCGGCGGACGGCTGGCGGCGCTAAGCCCCGCCGTGCACTCGCCGCGGCGCAGCTCCGAAGATTCCGCGGACGACGTCTTCAGCATCAAAGACCTCAGGCACGAGCTGAAGGAGGTAGAGGAGAAGTTCCGCAAGGCGATGATCTTAAACGCGCAGCTAGACAACGACAAGGCAGCGCTCGGCTACCAGCTCGAATTGCTGAAGGACCGCATCGAGGAGCTCACCGAGGAACACGCGCAGCTGCAGCGTGAACATAAAGAAAAATGCTCAGCGCACGAGAGACTAAAACGTGAACACGCGACGCTGGAGCGCGAGGTGAATGCGGCGCGGGACGCCGTGCGCGCGCGGGACTCCGCCGCCGCAGCCGCGGGCTTCGCCTTCGTAGAGGCCGAGCTCAACGGCACCGCGGATCAAACAGAGCTGAACGGGGCGGAGCCCGAGCTGGTGGCACAGGGCTTCGGTAGCGTGCCCCCGCTCGCGCTCGTCTCACATCACTCGGAACAGCTGCTCAATGATGCAGGGGAAGGCACACTTGATGTGCGGTTGCAGCGTCTGGTGAGCTCTAAGCAGGCGCTGGAGTCTGAGGTGCGCAAGCTGAAGCTGTGCCTCAACGAGGAGCGCGCCGCCAGACAGAACGGCGTCGCCGCGCACCACGACAGGGAGCACGACAGCGAGCTGGAATCGCTGCGCAAGTCGGTGTCGGAGGCGAAGGGGCGGGCGGCGCGTGCGGAGGCGGAGGCGGCGCTGCAGGCGGCGGCGGTGGCGCGGCTGGAGGCGCAGGTGGCCCGTCTCCGCGCGCGGCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAGGCTGCAGCGGGAGGCTAGAGAAGCATTGAACAGAGTTGAGGAGTTGGAGACGGAGAACAGTCACCTGACGAAGCGACTTGACAAGCTCAAGAACGCAAAGTCAGCGCTGCTGAAGGAGCTGTGA
- Protein Sequence
- MQVIILQTKSNIKEIYQERSYALLVLKAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAFDMYSETVGRRGGRLAALSPAVHSPRRSSEDSADDVFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELTEEHAQLQREHKEKCSAHERLKREHATLEREVNAARDAVRARDSAAAAAGFAFVEAELNGTADQTELNGAEPELVAQGFGSVPPLALVSHHSEQLLNDAGEGTLDVRLQRLVSSKQALESEVRKLKLCLNEERAARQNGVAAHHDREHDSELESLRKSVSEAKGRAARAEAEAALQAAAVARLEAQVARLRARQDHQDEHEEQLKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00651756;
- 90% Identity
- iTF_01140213;
- 80% Identity
- -