Yplu018595.1
Basic Information
- Insect
- Yponomeuta plumbellus
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_947310845.1
- Location
- OX371199.1:21785841-21802987[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5e-75 8.1e-71 239.6 30.8 1 280 32 306 32 318 0.87 2 2 0.4 6.5e+03 -3.0 7.3 200 236 356 391 336 394 0.49
Sequence Information
- Coding Sequence
- ATGTTTCCACCGAGGGGCATCATGGGTCTCTTCCCTGAGGAAGGTATAGGCCATACTCCACCACGGGCGCCAAGTCCGGATTGGTGGAGGCTTGCGGAGCAGCGGCTGGCAGCGCGGCGCGCGGCACGCGCCGAGGCGCGCGAGATCCGGATGCGCGAGCTGGAGCGCCAGCAGCGCGAACAGGAGGACCATGCTGACAAGGCCTACGACATGTATGCAGAGACGGTGACGCGGCGCGGCGGCGGGCGGCTGGCATCACTCGCGCCGGCTGCTCTGCACTCGCCGCGCCGCAGTTCCGAAGATTCTCTCGACGACAGTTTCAGCCTCAAGGAACTAAGGCATGAACTGAAGGAAGTGGAGGAGAAGTTCCGCAAGGCGATGATCCTGAACGCTCAGCTGGACAACGACAAGGCAGCGCTCAACTACCAGCGCGAGCTGCTTAAGGACCGGATAGAGGAGCAGCGGGAGGAGATGGCGCAACTGCAGCGTGAACACAAAGAGAAGTGCTCGGCGCACGAGCGCTTAAAACGCGAGCACGTCTCTCTGGAGCGGGAGCTCGAGGCGGCGCGGGACGCGGTGAGGGCGCGGGACGCCGCCGCCGCGGCCACCGGACGCGCCTTTGTGGAGGCCTCGGCGGACACCGCGCCCGAACTGCAGGGCGCCACATTCGGCACCTGTCCGCCGCTGGCCCTTGTGTCGCGGGACACTGAGCAGCTGCTTGGCGAGGCGGGGGAAGGGACGCTAGACGTGCGGTTGCAAAAGCTGATCGCGTCGAAGCAGGCGCTGGAGTCGGAAGTGCGCAAGCTGAAGCTCCAGTTGCACGACGAGCGAGCCGCGCGCCAGAACGGACAGGCCAACCATCACGAGATCGAGTTCGAGAACGAAGTGGAGTCGCTGCGCAAGTCGCAGGCGGAGGCGAAGGCGCGGGCGGCGCGCGCCGAGGCCGAGGCGGCGCTGCAGGGCGCCGCCGTGGCGCGCCTCGAGGCGCAGGTCGCCCGCCTGCGCGCGCGCCACGACGCGCAGGACTCGCACGAGGAGCAGCTCAAGCTCGAGCGCCGCCGGCTGCAGCGCGAGGCGCGCGAGGCCCAAAACCGCGTGGAAGAACTGGAGACGGAGAACAGTCACCTCAACAAGCGACTCGACAAGCTGAAGAACGCCAAGTCTGCGCTGCTCAAGGAGCTGTGA
- Protein Sequence
- MFPPRGIMGLFPEEGIGHTPPRAPSPDWWRLAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVTRRGGGRLASLAPAALHSPRRSSEDSLDDSFSLKELRHELKEVEEKFRKAMILNAQLDNDKAALNYQRELLKDRIEEQREEMAQLQREHKEKCSAHERLKREHVSLERELEAARDAVRARDAAAAATGRAFVEASADTAPELQGATFGTCPPLALVSRDTEQLLGEAGEGTLDVRLQKLIASKQALESEVRKLKLQLHDERAARQNGQANHHEIEFENEVESLRKSQAEAKARAARAEAEAALQGAAVARLEAQVARLRARHDAQDSHEEQLKLERRRLQREAREAQNRVEELETENSHLNKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00651756;
- 90% Identity
- -
- 80% Identity
- -