Aass024816.1
Basic Information
- Insect
- Antheraea assamensis
- Gene Symbol
- lrrfip2
- Assembly
- GCA_035772565.1
- Location
- JAQQSE010000219.1:14782-25350[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-78 1.3e-74 252.0 23.0 1 295 7 288 7 292 0.88 2 2 3 3e+04 -6.1 15.8 1 47 289 334 289 353 0.73
Sequence Information
- Coding Sequence
- ATGGAATGTAGAGAATTGGCGGAACAGCGGTTGGCGGCGCGACGAGCGGCGCGGGCCGAGGCGCGAGAGATCCGCATGCGCGAGCTGGAGCGGCAGCAACGCGAACAGGAGGATCATGCCGACAAGGCATATGACATGTATGCAGAGACTGTGGGGAGGCGCGCCGGCGGGCGACTCGCGGCGCTGAGTCCGGGCGGAGTGCACTCCCCCCGACGCAGTTCCGAAGACTCCACTGATGAGGCGTTCAGTATTAAAGACCTCAGGCACGAGCTGAAGGAGGTCGAAGAGAAATTCCGCAAAGCCATGATACTGAATGCGCAGCTGGATAACGACAAGGCGGCGCTCGGCTACCAGCTCGAACTGCTCAAGGACAGGATAGAGGAGCTCCACGAAGAATACGCGCAGTTGCAGCGCGAGCACAAGGAGAAATGCTCGGCTCACGAGCGGTTAAAGCGCGAGCACGGGTCCCTCGAGCGCGAGGTGGAGGGAGCGCGCGCGGCGGTGGTGGCGCGCGAGGCGGCCGCCGCGGCCGCTGGGTTCGCGTTCGTGGAGGCGGGAGCGGGGGAGGGCGCGGTGGCGGAGAGCGGGTGCGGGGCGGTACCGGCGCTCGCGCTCGTCTCGCACCAGGCGCAAGCGCTACTCAACGACGCCGGCGAGGGCACGCTCGATGTCCGATTGCAAAACCTGGTGAGCTCGAAACAAGCGCTGGAGTCGGAAGTGCGTAAGCTGAAGCTGCAGCTGAACGAGGAGCGCGCCGCGCGACACAACGGCGTCGCCTCACACAACGACCAGGAGTACGAAAACGAACTGGAGACGCTGAGGAAGGCGGTGGCGGAGGCGAAGGGGCGCGCGGCgcgggcggaggcggaggcggcgCTGCAGGCGGCGGCGCTGGCGCGGCTGGAGGCGCAGGTGTCGCGGCTGCGCGCGCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCCGGCTGCAGAGAGAGGCGAGAGAAGCTCTTAACCGAGTCGAAGAGCTGGAGACGGAGAATAGTCACCTCACGAAGCGTCTCGACAAGCTCAAGAACGCGAAGTCCGCGCTCCTCAAGGACCTGTGA
- Protein Sequence
- MECRELAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRAGGRLAALSPGGVHSPRRSSEDSTDEAFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHKEKCSAHERLKREHGSLEREVEGARAAVVAREAAAAAAGFAFVEAGAGEGAVAESGCGAVPALALVSHQAQALLNDAGEGTLDVRLQNLVSSKQALESEVRKLKLQLNEERAARHNGVASHNDQEYENELETLRKAVAEAKGRAARAEAEAALQAAALARLEAQVSRLRARQDHQDEHEEQLKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00651756;
- 90% Identity
- iTF_00187184;
- 80% Identity
- -