Aass022770.1
Basic Information
- Insect
- Antheraea assamensis
- Gene Symbol
- lrrfip2
- Assembly
- GCA_035772565.1
- Location
- JAQQSE010000177.1:22810-35657[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-78 2.9e-74 250.8 20.3 1 271 21 286 21 306 0.88 2 2 3 3e+04 -6.6 16.8 1 48 305 351 305 379 0.66
Sequence Information
- Coding Sequence
- ATGAGTTGTAATTCAAGTGTAGATACGATAAATATAACTAAGGGTTCGGCTACGTTGCAGGCGGAACAGCGGTTGGCGGCGCGACGAGCGGCGCGGGCCGAGGCGCGAGAGATCCGCATGCGCGAGCTGGAGCGGCAGCAACGCGAACAGGAGGATCATGCCGACAAGGCATATGACATGTATGCAGAGACTGTGGGGAGGCGCGCCGGCGGGCGACTCGCGGCGCTAAGTCCTGGCGGAGTGCACTCCCCCCGACGCAGTTCCGAAGACTCCACTGATGAGGCGTTCAGTATTAAAGACCTCAGGCACGAGCTGAAGGAGGTCGAAGAGAAATTCCGCAAAGCCATGATACTGAATGCGCAGCTGGATAACGACAAGGCGGCGCTCGGCTACCAGCTCGAACTGCTCAAGGACAGGATAGAGGAGCTCCACGAAGAATACGCGCAGTTGCAGCGCGAGCACAAGGAGAAATGCTCGGCTCACGAGCGGTTAAAGCGCGAGCACGGGTCCCTCGAGCGCGAGGTGGAGGGAGCGCGCGCGGCGGTAGTGGCGCGCGAGGCGGCCGCCGCTGCCGCAGGGTTCGCGTTCGTGGaggcgggggcgggggcgggggaGGGCGCGGTGGCGGAGGGCGGGTGCGGGGCGGTGCCGGCGCTCGCGCTCGTCTCGCACCAGGCCCAGGCGCTACTCAACGACGCCGGCGAAGGCACGCTCGATGTCCGATTGCAAAACCTGGTGAGCTCGAAACAAGCGCTGGAGTCGGAAGTGCGTAAGCTGAAGCTGCAGCTGAACGAGGAGCGCGCCGCCCGACACAACGGTGTCGCCTCACACAACGACCAGGAGTATGAAAACGAACTGGAGACGCTGAGGAAGGCGGTGGCGGAGGCGAAGGGGCGCGCGGCgcgggcggaggcggaggcggcgCTGCAGGCGGCAGCGCTGGCGCGGCTGGAGGCGCAGGTGTCGCGGCTGCGCGCGCGCCAGGACCATCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCCGGCTGCAGAGAGAGGCGAGAGAAGCTCTCAACCGGGTCGAAGAGCTGGAGACGGAGAACAGTCACCTCACGAAGCGTCTCGACAAGCTCAAGAACGCGAAGTCCGCGCTCCTCAAGGACCTGTGA
- Protein Sequence
- MSCNSSVDTINITKGSATLQAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRAGGRLAALSPGGVHSPRRSSEDSTDEAFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHKEKCSAHERLKREHGSLEREVEGARAAVVAREAAAAAAGFAFVEAGAGAGEGAVAEGGCGAVPALALVSHQAQALLNDAGEGTLDVRLQNLVSSKQALESEVRKLKLQLNEERAARHNGVASHNDQEYENELETLRKAVAEAKGRAARAEAEAALQAAALARLEAQVSRLRARQDHQDEHEEQLKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00651756;
- 90% Identity
- iTF_00187184;
- 80% Identity
- -