Basic Information

Insect: Drosophila malerkotliana
Gene Symbol: stc_1
Assembly: GCA_018153235.1
Location: JAECXV010000198.1:18701760-18705460[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 1.6e+04 -4.2 1.6 15 19 443 447 442 447 0.81

2 14 0.07 5.6e+02 0.5 2.5 4 11 476 483 475 484 0.92

3 14 6.2e-07 0.0049 16.7 15.1 1 19 488 505 488 505 0.93

4 14 1.6e-07 0.0013 18.6 11.4 1 19 541 559 541 559 0.97

5 14 2 1.6e+04 -6.3 3.9 7 13 563 569 563 570 0.74

6 14 3.6e-09 2.9e-05 23.8 13.6 1 19 599 617 599 617 0.98

7 14 0.00015 1.2 9.1 18.0 4 19 665 680 658 680 0.88

8 14 0.075 5.9e+02 0.4 11.9 1 11 720 730 720 742 0.79

9 14 5e-10 4e-06 26.6 15.5 1 18 747 764 747 765 0.97

10 14 1.8 1.4e+04 -3.9 0.9 6 10 794 798 794 799 0.81

11 14 2 1.6e+04 -8.8 11.7 10 18 812 821 801 822 0.73

12 14 1.2 9.3e+03 -3.4 1.3 8 13 827 832 826 833 0.80

13 14 8.9e-09 7.1e-05 22.6 10.1 1 16 858 873 858 880 0.87

14 14 6.9e-07 0.0055 16.5 15.8 1 19 890 909 890 909 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	1.6e+04	-4.2	1.6	15	19	443	447	442	447	0.81
2	14	0.07	5.6e+02	0.5	2.5	4	11	476	483	475	484	0.92
3	14	6.2e-07	0.0049	16.7	15.1	1	19	488	505	488	505	0.93
4	14	1.6e-07	0.0013	18.6	11.4	1	19	541	559	541	559	0.97
5	14	2	1.6e+04	-6.3	3.9	7	13	563	569	563	570	0.74
6	14	3.6e-09	2.9e-05	23.8	13.6	1	19	599	617	599	617	0.98
7	14	0.00015	1.2	9.1	18.0	4	19	665	680	658	680	0.88
8	14	0.075	5.9e+02	0.4	11.9	1	11	720	730	720	742	0.79
9	14	5e-10	4e-06	26.6	15.5	1	18	747	764	747	765	0.97
10	14	1.8	1.4e+04	-3.9	0.9	6	10	794	798	794	799	0.81
11	14	2	1.6e+04	-8.8	11.7	10	18	812	821	801	822	0.73
12	14	1.2	9.3e+03	-3.4	1.3	8	13	827	832	826	833	0.80
13	14	8.9e-09	7.1e-05	22.6	10.1	1	16	858	873	858	880	0.87
14	14	6.9e-07	0.0055	16.5	15.8	1	19	890	909	890	909	0.96

Sequence Information

Coding Sequence: ATGGCGGAGTACTGGCAGCAGCTTACTAATGGCGGGGGTGGCGGTGGCGGAAGGGGAGCAGCCGCTAGTGACTCACCGGTGGCATGCAACGGGACCGGTCCTGAGGCTGTGTCGCACAGCGGCGGCGGCGGCAATAACAACTATGTGAACTTCAATCAGTTCATCATGCAACACAACCTTGGAGGAGGCACGCCCAATGCCTCAAACTCAAGTCCCGGCTACATGCAACATCCCTTGGACAGCGGGAACAACATGAACTTTGCCATCAGCGGAGGCGGAGGAGCCTTCGGCCTAAATCCACCAACAACAGCTACGAACTCAAACAACTTCGAGCATTTCTTTCCACAGCCTGTATTCCCACGATATCAAAACGGCGACGGAGTCGCCAGTGCCGGCTTCACTAATAGCTTTGATTTGGGAAACCCTAACAACGGCAGCAGCAGCAGCAGTCCCTTTTCGAACCTCTACACGCCGTTTGGCAACAATCCGTTCGACTTCAGCGCTTCCAAGCTACAGGCCTCGGCGCCCGAATTCGTGCCTAATCTGGCCAAGCTGAGTCTAGAGGAGGCTCCAGTGGCCACGACGAACGGAAACAGCACTGCCAGCCCCGAAACTGCCAAAAAGGAGACGGAGATACCAGCTGGAGCGGGAGCAGCGAAAGTGGGAGCACCTGGAGGCGTGGGTGCATCAGGAGGAGCAGCCCGACCAGAGGAGAGAGGCGCCAACAGCTTCCGCCAAAACCAGAACTACGAGAGGGAGCGGGAAAGGGACCGAGATCGCGAGAGGGATCGGGATCGGCCGCGACAGCAGCGTCGCTCGGACTACCGCGAGGATCGTGAAGATCGCTATCAGAGGAACGATCGGGACCGTGACCGTGATCGGGATCGGGACAGGGACCGGGATCGGGACAGGGATCGGGATCGCGATCGCAAAAAGCCGCAAAAGCAGCAGCGCTACGACAATCATCGCAGCAACAAGCGGCGCGATGACTGGAACCGCAACAGGGATAGAATCAACGGATACCCACGGGCCGTCGACGACTTGGACACGAGCAACGAGAGTGCCCAGCCTTCGCCCGAAAAGCAGCCGCAGCAACAGCAAATCTCGCCGAGACGAAACCATCCACCGCCGGCGGACAATGAAAAGCTATCGCAGAGGGAGAAGCTAATTCGCGACATTGAGCAGAGGCGGCTCGAGTGCTTGGTGTGCGTGGAAGCCATCAAAGCGCACCAGCCGACATGGTCGTGCCAGAACTGCTACCACGTTCTGCACCTCAAGTGCACCACCACCTGGGCGAGCAGCTCCAAATCGGAAGTGGGCTGGCGCTGTCCGGCGTGCCAGAATGTGCTGCAGGAGCTGCCGCGCGAGTATCTCTGTTTCTGCGGCAAGCTGAAAAACCCGCCGGTCTCGCGCTCCGAATTGCCGCACAGCTGCGGCGAGGTGTGTTGCCGGATCGAGGGATGCAGTCATGCCTGTACCCTGCTCTGTCACCCGGGCCCTTGTCCACCGTGCCAGGCCAATGTGGTTCGCAGCTGTGGATGCGGACGCAGCACCAAGACGATGCAGTGCGCCATGAAGGAGGATCTGCTGTGCGGCGAGATCTGCGACAAGCTGCTCAACTGCGGCGAGCACCGGTGCAAGTCGGAGTGCCATGCAGGAAAGTGCGCTGCCTGCTCGGAGCAGGTGGAGCAGCACTGCCACTGCGGCAAGCAGGACCGCCAGGTGACCTGCACACGCGAGAGCCAGGACAAGCGAAGCTACTCGTGCAAGGAGAGCTGTGGCAAGCCGCTGCCGTGCGGCAATCACAAGTGCAAGGACTCTTGCCACGCTGGAAGCTGCAGGCCCTGTAAGCTGAGCCCCGACCAGATAACCAGCTGCCCCTGTGGCAAGATGCCCGTGGCGGCCACCCAGCGCACCAGCTGCCTGGACCCCATCCCCACCTGCGAGGGAATCTGCTCGCGGGTCTTGCGCTGTGGCAAGCCGGCCCATCCGCATCAGTGCGGCAGCAAGTGCCACCTGGGCCAGTGTCCACCTTGTCCCAAGCAGACGGCGGTGAAGTGCCGCTGCGGCCACATGGACCAGATGATCAAGTGCCGCCAGCTGTCCACCAGAGCGGATGACGCTCGCTGCAAGCGGCGCTGCACCAAGAAGCGGAGCTGCGGCAAGCACAAGTGCAATGCCGAGTGCTGCATCGACATCGACCACGCTTGTCCGCTGCCCTGCAACCGGACCCTGAGCTGCGGCAAGCACAAGTGCGACCAGCCCTGCCATCGCGGCAACTGCCCGCCTTGCTACCGCAGCAGCTTCGAGGAGCTCTACTGCGAGTGCGGAGCAGAGGTTATCTACCCGCCGGTGCCGTGCGGCACCAAGAAGCCCCTCTGCAAGCGTCCGTGCTCGCGATCGCATCCCTGCGAGCATCCGCCGCAACACAATTGCCACTCGGACGCCACTTGTCCGCCCTGCATGCTGTTCACCACCAAGTCTTGCCACGGTGGCCACGAGCAGCGCAAAACCATTCCCTGCTCCCAGGAGAGCTTCAGTTGTGGAATGGCCTGTGCGAAGCCGTTGGCTTGTGGGCGCCACAAGTGCATCAAGCCGTGCCACGAGGGCGCCTGCCAGGCAGCCGGCGACGTTTGCCGACAGAGCTGCACCAAGCCGCGTCCCACTTGCGGCCACAAGTGCTCAGCACCCTGTCACGAGGGCTCCTGCCCCGAAACGCCGTGCAAGGAGCTAGTGGAGGTACAGTGCGAGTGCGGCAACCGGAAACAGAGTCGCAGCTGCCAGGAGCTGGCTCGCGAGCACAGTCGCATTGCCACGGCTCAGCTGGCCTCATCCATGGCGGAGATGTCCCGGGGAAACTACATGGAGCTCAGCGAGATCTTGGCTCCCTCCAAGGCCAGCAAGTCCAATCGAACCTTGGACTGCAACGATGAGTGCCGACTGTTGGAGCGCAATCGTCGCCTTGCCATGGCCCTATCGTCTCGAAACCCAGAGACTCAGCAAAAGTCCCTGACTAAGTACTCGGAGTTCGTGAAAGGATTCGCCAAGAGGAACCCGGTGCTGACCAAGAGCGTATACGAAACGTTGAGCGACCTCGTTAAGCTGGCCAAGGAGAGCAAGCAGCGGTCTCGCAGCCACTCGTTCCCGACCATGAACCGGGAGAAGAGGCAGTTGGTGCACGAGCTATGCGAGATATTTGGCATAGAGTCTGTGTCCTACGACAAGGAGCCCAACCGAAATGTGGTAGCCACGGCGCACAAGGAAAGGTGCTGGTTGCCCGCCACTAGTATCATGGAAGTCCTGGCTCGGGAGTCAGGACAGAGACGCGTCCCTGTACCCAGCAACAATGCATGGAGCTTAAAGAAATAG
Protein Sequence: MAEYWQQLTNGGGGGGGRGAAASDSPVACNGTGPEAVSHSGGGGNNNYVNFNQFIMQHNLGGGTPNASNSSPGYMQHPLDSGNNMNFAISGGGGAFGLNPPTTATNSNNFEHFFPQPVFPRYQNGDGVASAGFTNSFDLGNPNNGSSSSSPFSNLYTPFGNNPFDFSASKLQASAPEFVPNLAKLSLEEAPVATTNGNSTASPETAKKETEIPAGAGAAKVGAPGGVGASGGAARPEERGANSFRQNQNYERERERDRDRERDRDRPRQQRRSDYREDREDRYQRNDRDRDRDRDRDRDRDRDRDRDRDRKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRAVDDLDTSNESAQPSPEKQPQQQQISPRRNHPPPADNEKLSQREKLIRDIEQRRLECLVCVEAIKAHQPTWSCQNCYHVLHLKCTTTWASSSKSEVGWRCPACQNVLQELPREYLCFCGKLKNPPVSRSELPHSCGEVCCRIEGCSHACTLLCHPGPCPPCQANVVRSCGCGRSTKTMQCAMKEDLLCGEICDKLLNCGEHRCKSECHAGKCAACSEQVEQHCHCGKQDRQVTCTRESQDKRSYSCKESCGKPLPCGNHKCKDSCHAGSCRPCKLSPDQITSCPCGKMPVAATQRTSCLDPIPTCEGICSRVLRCGKPAHPHQCGSKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPLCKRPCSRSHPCEHPPQHNCHSDATCPPCMLFTTKSCHGGHEQRKTIPCSQESFSCGMACAKPLACGRHKCIKPCHEGACQAAGDVCRQSCTKPRPTCGHKCSAPCHEGSCPETPCKELVEVQCECGNRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPSKASKSNRTLDCNDECRLLERNRRLAMALSSRNPETQQKSLTKYSEFVKGFAKRNPVLTKSVYETLSDLVKLAKESKQRSRSHSFPTMNREKRQLVHELCEIFGIESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWSLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00477704; iTF_00476303; iTF_00490465; iTF_00524802; iTF_00492646; iTF_00548481; iTF_00581953; iTF_00537187; iTF_00562147; iTF_00580355; iTF_00488396; iTF_00588547; iTF_00529956; iTF_00494790; iTF_00512402; iTF_00508004; iTF_00615268; iTF_00566469; iTF_00618021; iTF_00485543; iTF_00615880; iTF_00605257; iTF_00486990; iTF_00605998; iTF_00565775; iTF_00504368; iTF_00613872; iTF_00594931; iTF_00481908; iTF_00526260; iTF_00594229; iTF_00578966; iTF_00603031; iTF_00572282; iTF_00483357; iTF_00609559; iTF_00546333; iTF_00550621; iTF_00478398; iTF_00541464; iTF_00515934; iTF_00491903; iTF_00505792;
90% Identity: iTF_00580355; iTF_00488396; iTF_00615268; iTF_00566469; iTF_00477704; iTF_00615880; iTF_00476303; iTF_00504368; iTF_00481908; iTF_00546333; iTF_00550621;
80% Identity: -