Basic Information

Insect: Drosophila rhopaloa
Gene Symbol: stc
Assembly: GCA_018152115.1
Location: JAECXI010000002.1:15424806-15430078[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 1.7e+04 -4.1 1.6 15 19 413 417 412 417 0.81

2 13 0.049 4.1e+02 1.1 2.2 4 11 446 453 445 454 0.91

3 13 6e-07 0.0051 16.7 15.1 1 19 458 475 458 475 0.93

4 13 1.3e-07 0.0011 18.9 12.6 1 19 511 529 511 529 0.99

5 13 2 1.7e+04 -6.3 3.9 7 13 533 539 533 540 0.74

6 13 3.5e-09 3e-05 23.9 13.6 1 19 569 587 569 587 0.98

7 13 0.00014 1.2 9.1 18.0 4 19 635 650 628 650 0.88

8 13 0.068 5.7e+02 0.6 11.8 1 11 690 700 690 712 0.79

9 13 4.9e-10 4.1e-06 26.6 15.5 1 18 717 734 717 735 0.97

10 13 1.7 1.5e+04 -3.9 0.9 6 10 764 768 764 769 0.81

11 13 2 1.7e+04 -9.3 11.5 10 18 782 791 771 792 0.72

12 13 2.1e-08 0.00018 21.4 11.4 1 17 828 844 828 850 0.93

13 13 5.3e-07 0.0045 16.9 13.1 1 19 860 879 860 879 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	1.7e+04	-4.1	1.6	15	19	413	417	412	417	0.81
2	13	0.049	4.1e+02	1.1	2.2	4	11	446	453	445	454	0.91
3	13	6e-07	0.0051	16.7	15.1	1	19	458	475	458	475	0.93
4	13	1.3e-07	0.0011	18.9	12.6	1	19	511	529	511	529	0.99
5	13	2	1.7e+04	-6.3	3.9	7	13	533	539	533	540	0.74
6	13	3.5e-09	3e-05	23.9	13.6	1	19	569	587	569	587	0.98
7	13	0.00014	1.2	9.1	18.0	4	19	635	650	628	650	0.88
8	13	0.068	5.7e+02	0.6	11.8	1	11	690	700	690	712	0.79
9	13	4.9e-10	4.1e-06	26.6	15.5	1	18	717	734	717	735	0.97
10	13	1.7	1.5e+04	-3.9	0.9	6	10	764	768	764	769	0.81
11	13	2	1.7e+04	-9.3	11.5	10	18	782	791	771	792	0.72
12	13	2.1e-08	0.00018	21.4	11.4	1	17	828	844	828	850	0.93
13	13	5.3e-07	0.0045	16.9	13.1	1	19	860	879	860	879	0.96

Sequence Information

Coding Sequence: ATGGCTGAGTACTGGCAGCAGTTGTCCAACGGCGGAGGAGGGGCTGGAATAGGATCAGGATCAGCAGGACCTGGCAGTGAGTCCCCTTCCATGGCCGCCTGCAATGGAGGTCACCAGGGTGGGTCCAACACTCCAAACAGCGGCAACAACAACTATGTGAACTTCAATCAGTTCATCATGCAACACAATCTGGGCGGAGGAACGCCCTCCAGTGCCGCAGGCACCATGCAACATCCGCTGGGAAGCACTAGCACTGGCTCCAGCAGCAACACAAACTACTCCCTCAGCGGCGGCGGAGGAGCCTTTGGCCTCAATCCTCCAGCGGCATCAGCGAACTCCAACAACTTTTCAAATTTTTACTCGCAGCCCGTATTCCCATCGTATCAAAATGGCGATGGCATCGCTAGCGCCGCATTCACCAACAGTTACGGATCGGGCAACCCGAACAGCAGCACTTTTTCGAGTCTTTACACACCGTTCGGCAACAATCCGTTTGACTTCAGCGCTTCCAAGTTGCAGGCCTCGGCGCCCGAATTTGTGCCCAGTCTGGCCAAGCTGAGTCTGGACGAGACTCCAGCAGCCACAACGAACGGGAACAGCACTGCCAGCCTAGAGACTGCCATAAATGAGACAAGACCCAGGGCTCTGCAAGCCGAAGGCGCTTCGGAAAGAGGAGCCAACAACCACCGCTCGAACCACAATTACGAAAGGGACCGGGATAGAGATTCTCGTCCAGGAAGCACGCGTCAGCAGCGGCGCTCCGACTACCGAGATGATCGGGAGGATCGACGGGAAAGAGAGGATCGCTACGAACGAAACGATCGCAGGAGGCCGCAGAAACAGCAACGCTACGACAATCATCGCAGCAACAAACGGAGGGATGACTGGAATCGCAACAGGGATCGTATCAACGGCTTTCCACGGGCCGCCGACGATCTGGACACGAGCAACGAAAGTGCCCACCCATCGCCCGAAAAGCAATCGCAACAGCTGCAGCAGCATCAGCAGATTTCCCCGAGAAGAGCTCCACCGCCGCCGCCGGCGGATAACGAGAAGCTATCGCAGCGTGAGAAACTCATCCGCGATATCGAACAGCGGCGACTGGAGTGCCTGGTGTGCGTGGAGGCGATCAAGGCGCATCAGCCGACCTGGTCGTGCCAGAACTGTTACCACTTGCTTCATCTGAAGTGCACCATTACCTGGGCGAGCAGCTCCAAGTCTGAGAACGGATGGCGTTGCCCAGCCTGCCAGAATGTGCTACAGGATCTGCCGCGCGAGTATCTCTGCTTTTGCGGGAAGCTAAAGAACCCGCCGGTGTCGCGGACGGAGTTGGCCCACAGCTGCGGCGAGGTCTGCTGCCGAATCGAGGGCTGCAGTCACGCCTGCACCTTGCTCTGTCACCCCGGTCCGTGTCCGCCGTGCCAGGCCAATGTGGTTCGAAGCTGTGGCTGCGGACGCAGTTCCAAGACCATGCAGTGCGCCATGAAGGAAGAGCTCTTGTGCGGCGAGATCTGCGACAAGGCGCTAAACTGTGGCGAGCATCGGTGCAAGGCGGAGTGCCATTCGGGCAAGTGTGCTGCGTGTCCCGATCAGGTGGAGCAGCACTGCCATTGTGGCAAACAGGAGCGCCAGGTGCAGTGTACGCGCGAGAACCAGGACAAGCGCAGCTACTCGTGCAAGGAGAGCTGTGGAAAACCGCTACCCTGTGGAAACCACAAATGCAAGGACTCCTGCCACGCGGGCAGTTGTAGACCCTGCAAGCTGAGTCCGGAACAGATAACCAGCTGTCCCTGTGGCAAGATGCCCGTACCGGCCGCTCAGCGTTCGAGCTGCCTGGATCCCATCCCCACTTGCGAGGGCATCTGCTCCAGGACACTACGCTGTGGAAAGCCGGCCCATCCGCACCAGTGCGGCAGCAAGTGCCACCTGGGCCAGTGTCCGCCGTGTCCCAAGCAAACGGCTGTTAAGTGTCGTTGCGGCCACATGGACCAGATGATCAAGTGTCGGCAGCTGTCCAGTCGGGCGGACGATGCCCGTTGCAAGCGACGATGCACCAAGAAGCGCAGCTGTGGCAAGCACAAGTGCAATGCCGAGTGCTGCATCGACATAGATCACGCATGTCCGCTGCCTTGCAACCGAACCTTGAGTTGCGGCAAACACAAGTGCGACCAGCCGTGCCACCGCGGAAATTGTCCGCCATGCTACCGCAGTAGTTTTGAGGAGCTCTACTGTGAGTGTGGCGCCGAAGTAATCTATCCGCCAGTGCCGTGCGGCACCAAGAAGCCAATCTGCAAGCGCCCCTGCTCGCGCTCCCATCCCTGCGAGCATCCGCCCCAGCACAACTGCCATTCGGCGACCACGTGTCCGCCCTGCATGATGTTCACCACGAAGTTCTGCCACGGCAACCATGAGCAGCGCAAGACCATTCCCTGCTCGCAGCCCAACTTCAGCTGTGGCCTAGCCTGTGGCAAACCATTGCCATGTGGCCGCCACAAGTGCATCAAGCCGTGCCACGAGGGCGCCTGTCAGACGACCGGCGAGATCTGCCGCCAGAGCTGCACCAAGCCGCGATCGAACTGTGGTCACAAGTGTGCGGCCGCCTGTCACGAAGGAGCCTGCCCGGAGACTCCCTGCAAGGAGCAAGTGGAAGTTCAGTGCGAGTGCGGCCACCGGAAGCAGAGCCGCAGCTGCCAGGAGTTGGCTAGGGAGCACAGCCGCATAGCCACTGCCCAGCTGGCCTCATCCATGGCAGAGATGTCCCGCGGCAATTACATGGAGCTCAGCGAAATCTTGGCCCCGGCCAAGGCCAACAAGTCCAACAGAACTCTGGATTGCAACGACGAATGCCGACTGCTGGAGAGGAATCGTCGCCTGGCCGTGGCCCTGTCCTCAGGAAATCCCGATACTAAGCAAAAGTCCCTGACCAAGTACTCGGAGTTTGTTCGTGGGTTTGCAAAGAGAAATCCGGCGCTTACCAAGAGCGTGTACGAAACGCTAAGTGATCTAGTGAAACTGGCCAAGGAGAGCAAGCAGCGGTCAAGGAGCCACTCCTTCCCCACGATGAACCGCGAGAAGAGGCAGCTAGTGCACGAGTTGTGCGAGATATTTGGCATAGAGTCGGTTTCCTATGACAAGGAGCCCAATCGTAATGTGGTGGCCACTGCACATAAGGAAAGGTGCTGGCTACCCGCTACGAGCATTATGGAGGTGCTGGCACGAGAGTCCGGACAACGTCGTGTCCCGGTTCCCAGTAACAATGCGTGGGGCTTGAAGAAATAA
Protein Sequence: MAEYWQQLSNGGGGAGIGSGSAGPGSESPSMAACNGGHQGGSNTPNSGNNNYVNFNQFIMQHNLGGGTPSSAAGTMQHPLGSTSTGSSSNTNYSLSGGGGAFGLNPPAASANSNNFSNFYSQPVFPSYQNGDGIASAAFTNSYGSGNPNSSTFSSLYTPFGNNPFDFSASKLQASAPEFVPSLAKLSLDETPAATTNGNSTASLETAINETRPRALQAEGASERGANNHRSNHNYERDRDRDSRPGSTRQQRRSDYRDDREDRREREDRYERNDRRRPQKQQRYDNHRSNKRRDDWNRNRDRINGFPRAADDLDTSNESAHPSPEKQSQQLQQHQQISPRRAPPPPPADNEKLSQREKLIRDIEQRRLECLVCVEAIKAHQPTWSCQNCYHLLHLKCTITWASSSKSENGWRCPACQNVLQDLPREYLCFCGKLKNPPVSRTELAHSCGEVCCRIEGCSHACTLLCHPGPCPPCQANVVRSCGCGRSSKTMQCAMKEELLCGEICDKALNCGEHRCKAECHSGKCAACPDQVEQHCHCGKQERQVQCTRENQDKRSYSCKESCGKPLPCGNHKCKDSCHAGSCRPCKLSPEQITSCPCGKMPVPAAQRSSCLDPIPTCEGICSRTLRCGKPAHPHQCGSKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSSRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPICKRPCSRSHPCEHPPQHNCHSATTCPPCMMFTTKFCHGNHEQRKTIPCSQPNFSCGLACGKPLPCGRHKCIKPCHEGACQTTGEICRQSCTKPRSNCGHKCAAACHEGACPETPCKEQVEVQCECGHRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPAKANKSNRTLDCNDECRLLERNRRLAVALSSGNPDTKQKSLTKYSEFVRGFAKRNPALTKSVYETLSDLVKLAKESKQRSRSHSFPTMNREKRQLVHELCEIFGIESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00539339;
90% Identity: iTF_00515934;
80% Identity: -