Basic Information

Insect: Drosophila vulcana
Gene Symbol: stc
Assembly: GCA_008042555.1
Location: VNJP01008756.1:56851-60406[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 2.7e+04 -4.1 1.6 15 19 407 411 406 411 0.81

2 14 0.048 6.6e+02 1.1 2.2 4 11 440 447 439 448 0.91

3 14 6e-07 0.0082 16.7 15.1 1 19 452 469 452 469 0.93

4 14 3.6e-05 0.5 11.0 9.4 1 18 505 522 505 523 0.95

5 14 2 2.7e+04 -6.3 3.9 7 13 527 533 527 534 0.74

6 14 3.5e-09 4.8e-05 23.9 13.6 1 19 563 581 563 581 0.98

7 14 3.4e-05 0.47 11.1 16.3 4 19 629 644 622 644 0.87

8 14 0.06 8.2e+02 0.8 11.6 1 11 684 694 684 706 0.79

9 14 4.8e-10 6.7e-06 26.6 15.5 1 18 711 728 711 729 0.97

10 14 1.7 2.4e+04 -3.9 0.9 6 10 758 762 758 763 0.81

11 14 2 2.7e+04 -9.1 11.6 10 18 776 785 765 786 0.71

12 14 2 2.7e+04 -4.4 1.5 9 13 792 796 791 797 0.79

13 14 1.1e-08 0.00015 22.3 10.9 1 17 822 838 822 844 0.89

14 14 4.3e-07 0.0059 17.2 14.8 1 19 854 873 854 873 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	2.7e+04	-4.1	1.6	15	19	407	411	406	411	0.81
2	14	0.048	6.6e+02	1.1	2.2	4	11	440	447	439	448	0.91
3	14	6e-07	0.0082	16.7	15.1	1	19	452	469	452	469	0.93
4	14	3.6e-05	0.5	11.0	9.4	1	18	505	522	505	523	0.95
5	14	2	2.7e+04	-6.3	3.9	7	13	527	533	527	534	0.74
6	14	3.5e-09	4.8e-05	23.9	13.6	1	19	563	581	563	581	0.98
7	14	3.4e-05	0.47	11.1	16.3	4	19	629	644	622	644	0.87
8	14	0.06	8.2e+02	0.8	11.6	1	11	684	694	684	706	0.79
9	14	4.8e-10	6.7e-06	26.6	15.5	1	18	711	728	711	729	0.97
10	14	1.7	2.4e+04	-3.9	0.9	6	10	758	762	758	763	0.81
11	14	2	2.7e+04	-9.1	11.6	10	18	776	785	765	786	0.71
12	14	2	2.7e+04	-4.4	1.5	9	13	792	796	791	797	0.79
13	14	1.1e-08	0.00015	22.3	10.9	1	17	822	838	822	844	0.89
14	14	4.3e-07	0.0059	17.2	14.8	1	19	854	873	854	873	0.96

Sequence Information

Coding Sequence: ATGGACGAGTATTGGCAGCAGCTAACCAACGGTGGCGTTCATGGAGGAGCAGCCACCAACGGCCATGGTCACGAGGCGGCGTCGGCGCAAGCTGCGGGAAACAGCGCCAGCGGAGCTACAaccagcggcaacagcaacaacaacaactatgtGAACTTTAATCAGTTCATTCAACAGCACAACCTGGGCGGCGGATCATCGCCCACTGCCAGCGCAGGAACAATGCAGCACCCACTGAGCGGCTGGAATAACATGAACTACAacatcggcggcggcggaggagccTTTGGCCTGAATCCGCCAGTGGCTACGATAGGGAGTTCCAACAGCTTTGGGCATCTTTATTCACAGCCGATGTTTCCATCGTACCAAAATGGCGATGGCACCGCCTCCTTTAGCAACAACTATGACGACACCTTTTCGAATCTGTACACACCGTTCGGCAACAACCCCTTCGACTTTAGCTCTTCCAAGCTGCAGGCCTCAGCCCCCGAATTTGTGCCCAATCTGGCCAAGCTGAGTCTAAACGAGGAGCCAGCGACAGCGGCGACGACGCCAAATGGTAACAGGAACATCACTGCCAGCCAAGAAACTGCCATTAGTGTGACGGGAACAAGGGAACGGCCACAACCGGGTAGAAGCGGTGGATCAGGGGGAGGAGGAGATCCCCACCACCTTCGCCTATCCGCCAACAATTACGAAAGAGATCGCGGTGACAGAGACTCGCGACCGGGAAGTACCAGGCAGCAGCGTCGCTCTGATTACCGCGACGACCGGGAGGATCGATACGAGCGAAATGATCGCAAGAAGCcccagaagcagcagcgctACGACAATCATAGAAGCAACAAACGAAGGGACGATTGGAATCGCAACAGGGACCGCATCAATGGCTTTCCCCGGGCCGCCGACGAGCTGGACACTAGCAATGAGAGTGCTCAGCCGTCGCCcgaaaagcagcaacaaacgacgcagcagcagcagcagatttcTCCGCGAAGAACTGTGCCGCCTCCACCGGCGGCGGATAATGAGAAGCTATCGCAGCGGGAGAAACTCATACGCGATATTGAGCAACGGCGACTGGAGTGCCTCGTGTGCGTGGAGGCCATCAAGGCGCACCAGCCGACGTGGTCCTGCCAGAACTGCTACCACGTTCTCCACCTCAAGTGCACTATTACCTGGGCGAGCAGCTCCAAATCGGATGTCGGCTGGCGGTGTCCCGCCTGTCAGAATGTCCTCCAAGAGCTGCCGCGCGAGTATCTCTGCTTTTGCGGAAAACTCAAGAACCCGCCGGTGTCCCGCACAGAGCTGGCCCACAGCTGCGGTGAGGTTTGTTGCCGGATCGAGGGCTGCAGCCATGCTTGCACACTTCTATGCCACCCGGGCCCCTGTCCACCGTGCCAGGCCAATGTGGTGCGCAACTGTGGCTGCGGGCGCAGCTCGAAGACGATGCAGTGCGCCATGAAAGAGGATCTCCTCTGTGGCGAGATCTGTGACAAGGTGCTGAACTGTGCCGAGCATCGATGTGGCGCTGAGTGTCACGCGGGCAAGTGTGCTGCTTGTGCGGAGCAGGTGGAGCAGCACTGCCACTGCGGCAAGCAGGAGCGCCAGGTGCAGTGCACGCGCGAGAACCAGGACAAGCGGAGCTACTCGTGCAAGGAGAGTTGCGGGAAGCCCCTGCCTTGCGGTAACCACAAGTGCAAAGACTCCTGCCACGCGGGCAGCTGTAGGCCTTGTAAGCTAAGTCCCGAACAGATAACCAGCTGTCCTTGCGGTAAGATGCCGGTGCCGGCTGCTCAACGTTCGAGCTGCCTGGACCCCATCCCAACTTGCGAGGGAATCTGTTCGAGGACGCTGCGCTGCGGCAAGCCAGCTCATCCCCATCAGTGCGCCAGCAAGTGTCACCTGGGCCAGTGTCCGCCGTGTCAAAAGCAAACGGCTGTCAAGTGTCGCTGCGGCCACATGGATCAGATGATCAAGTGCCGGCAGTTGTCCACTCGGGCGGACGATGCCCGCTGCAAGCGACGCTGCACGAAGAAGCGCAGCTGCGGCAAGCACAAGTGCAACGCGGAGTGCTGCATCGACATCGATCATGCCTGCCCGCTGCCCTGCAACCGGACTCTCAGTTGCGGCAAGCACAAGTGCGATCAGCCCTGCCACCGAGGCAACTGTCCGCCGTGCTATCGCAGCAGCTTCGAGGAGCTCTACTGCGAGTGCGGGGCCGAGGTGATATATCCGCCGGTACCGTGCGGCACCAAGAAGCCGCTCTGCAAGCGTCCCTGCTCGCGATCACATCCCTGCGAGCATCCGCCGCAGCACAACTGCCACTCGGCGGCCACCTGTCCGCCGTGCATGATTTTCACCACCAAGTTCTGTCACGGCGGTCACGAGCAGCGAAAGACTATTCCCTGCTCGCAGGCCAACTTCAGTTGTGGCCTGGCGTGCGGCAAGCCCTTGCCATGTGGCCGTCATAAGTGCATCAAGCCGTGTCACGAGGGCGCCTGCCAGAGTGCCGGCGAGGTGTGCCGCCAGAGCTGCACTAAGCCGCGGACGCTCTGCGGCCATAAGTGTGCCGCTCCCTGTCATGAAGGCGCCTGTCCCGAGACACCGTGCAAGGAGCTGGTGGAGGTTCAGTGTGAGTGCGGCCACCGAAAGCAGAGTCGCAGCTGCCAGGAGCTGGCCAGGGAGCACAGTCGGATTGCCACCGCCCAGCTGGCCTCCTCCATGGCGGAGATGTCGCGCGGCAACTACATGGAGCTGAGCGAAATTCTGGCTCCCTCCAAGACTAGCAAATCGAACCGAACttTGGATTGCAACGATGAGTGTCGTCTGCTAGAGCGTAATCGCCGCCTGGCCTCTGCTCTGTCATCGGGCAACTCGGACACGAAGCCAAAGTCGCTGACCAAGTACTCCGAGTTCGTGCGCGGCTTTGCCAAGAGGAATCCGGCTTTGACCAAGAGCGTGTACGAGACGCTGAGCGATCTGGTGAAGCTGGCCAAGGAGAGCAAGCAGCGGTCGCGGAGCCACTCCTTTCCCACGATGAACCGCGAGAAGAGGCAATTGGTGCACGAGCTATGCGAGATATTTGGCATTGAGTCGGTCTCCTACGACAAGGAGCCCAACAGAAATGTTGTGGCCACGGCCCACAAGGAGAGGTGCTGGTTGCCTGCCACGAGCATCATGGAGGTGCTGGCTCGTGAGTCTGGCCAGCGTCGAGTCCCTGTGCCCAGCAACAATGCTTGGAGCTTAAAGAAATAG
Protein Sequence: MDEYWQQLTNGGVHGGAATNGHGHEAASAQAAGNSASGATTSGNSNNNNYVNFNQFIQQHNLGGGSSPTASAGTMQHPLSGWNNMNYNIGGGGGAFGLNPPVATIGSSNSFGHLYSQPMFPSYQNGDGTASFSNNYDDTFSNLYTPFGNNPFDFSSSKLQASAPEFVPNLAKLSLNEEPATAATTPNGNRNITASQETAISVTGTRERPQPGRSGGSGGGGDPHHLRLSANNYERDRGDRDSRPGSTRQQRRSDYRDDREDRYERNDRKKPQKQQRYDNHRSNKRRDDWNRNRDRINGFPRAADELDTSNESAQPSPEKQQQTTQQQQQISPRRTVPPPPAADNEKLSQREKLIRDIEQRRLECLVCVEAIKAHQPTWSCQNCYHVLHLKCTITWASSSKSDVGWRCPACQNVLQELPREYLCFCGKLKNPPVSRTELAHSCGEVCCRIEGCSHACTLLCHPGPCPPCQANVVRNCGCGRSSKTMQCAMKEDLLCGEICDKVLNCAEHRCGAECHAGKCAACAEQVEQHCHCGKQERQVQCTRENQDKRSYSCKESCGKPLPCGNHKCKDSCHAGSCRPCKLSPEQITSCPCGKMPVPAAQRSSCLDPIPTCEGICSRTLRCGKPAHPHQCASKCHLGQCPPCQKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPLCKRPCSRSHPCEHPPQHNCHSAATCPPCMIFTTKFCHGGHEQRKTIPCSQANFSCGLACGKPLPCGRHKCIKPCHEGACQSAGEVCRQSCTKPRTLCGHKCAAPCHEGACPETPCKELVEVQCECGHRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPSKTSKSNRTLDCNDECRLLERNRRLASALSSGNSDTKPKSLTKYSEFVRGFAKRNPALTKSVYETLSDLVKLAKESKQRSRSHSFPTMNREKRQLVHELCEIFGIESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWSLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00539339;
90% Identity: iTF_00489062;
80% Identity: -