Basic Information

Insect: Drosophila pectinifera
Gene Symbol: stc
Assembly: GCA_008042775.1
Location: VNKC01000865.1:113427-117086[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 1.6e+04 -4.1 1.6 15 19 406 410 405 410 0.81

2 14 0.048 3.8e+02 1.1 2.2 4 11 439 446 438 447 0.91

3 14 6e-07 0.0047 16.7 15.1 1 19 451 468 451 468 0.93

4 14 3.8e-07 0.003 17.4 10.4 1 19 504 522 504 522 0.97

5 14 2 1.6e+04 -6.3 3.9 7 13 526 532 526 533 0.74

6 14 3.5e-09 2.8e-05 23.9 13.6 1 19 562 580 562 580 0.98

7 14 2.4e-05 0.19 11.6 17.0 4 19 628 643 621 643 0.88

8 14 0.06 4.7e+02 0.8 11.6 1 11 683 693 683 705 0.79

9 14 4.8e-10 3.8e-06 26.6 15.5 1 18 710 727 710 728 0.97

10 14 1.7 1.4e+04 -3.9 0.9 6 10 757 761 757 762 0.81

11 14 2 1.6e+04 -9.1 11.6 10 18 775 784 764 785 0.71

12 14 2 1.6e+04 -4.4 1.5 9 13 791 795 790 796 0.79

13 14 1.2e-08 9.6e-05 22.2 10.7 1 17 821 837 821 843 0.94

14 14 0.00024 1.9 8.4 13.1 1 19 853 872 853 872 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	1.6e+04	-4.1	1.6	15	19	406	410	405	410	0.81
2	14	0.048	3.8e+02	1.1	2.2	4	11	439	446	438	447	0.91
3	14	6e-07	0.0047	16.7	15.1	1	19	451	468	451	468	0.93
4	14	3.8e-07	0.003	17.4	10.4	1	19	504	522	504	522	0.97
5	14	2	1.6e+04	-6.3	3.9	7	13	526	532	526	533	0.74
6	14	3.5e-09	2.8e-05	23.9	13.6	1	19	562	580	562	580	0.98
7	14	2.4e-05	0.19	11.6	17.0	4	19	628	643	621	643	0.88
8	14	0.06	4.7e+02	0.8	11.6	1	11	683	693	683	705	0.79
9	14	4.8e-10	3.8e-06	26.6	15.5	1	18	710	727	710	728	0.97
10	14	1.7	1.4e+04	-3.9	0.9	6	10	757	761	757	762	0.81
11	14	2	1.6e+04	-9.1	11.6	10	18	775	784	764	785	0.71
12	14	2	1.6e+04	-4.4	1.5	9	13	791	795	790	796	0.79
13	14	1.2e-08	9.6e-05	22.2	10.7	1	17	821	837	821	843	0.94
14	14	0.00024	1.9	8.4	13.1	1	19	853	872	853	872	0.96

Sequence Information

Coding Sequence: ATGGACGAGTACTGGCAGCAGCTGACCAACGGTGTCGATCGTGGAGGTGCAGCCGCTAATGAGTCAGCGGTGGTCTACAATGGTCACGGCCACGAGGCACCAGCGCAAGCTTCTGGCAACAGCGCCAGCGGCGctaccagcaacagcaacaacaactacgtGAACTTTAATCAGTTCATCCAGCAGCACAACCTGGGCGGAGGATCATCGCCCACTGCCAGCACCGGAACAATGATCCATCCGCTAAGCAGCGTCAACAACACAAACTACaacatcggcggcggcggaggagcctTCGGCCTGAATCCGCCAGTTGCTCCGTCAGTGAATTCCAACAGCTTTGGGCATCTTTATTCGCAGCCGATATTCCCAGCGTACCAAAATGGCGAGGGCGCCGCCTCCTTCACCAACAGCTATGATGATACCTTTTCGAATCTGTATACACCGTTTGGCAACAATCCGTTCGACTTCAGCTCTTCCAAGCTGCAGGCCTCGGCTCCAGAATTTGTGCCCAATCTGGCCAAGCTGAGTCTGAACGAAACTCCGGCGGCGACGACGCCAAACGGGAACAGGAACTTCACTGCCAGCCAAGAAACTGCCATTAGTGTGACGGGAACCAGAACACCACAACCGGGGGGAAGCAGTGGATCAGGTGGACTCTCCGAACGAGGAGACCCCCACCACCTTCGGTTAGCCGGTAACAATTACGAAAGGGATCGGGGCGACAGAGACTCGCGACCGGGAAGCACCCGCCAGCAGCGCCGTTCCGACTATCGCGATGACCGCGAGGATCGATACGAGCGAAACGATCGCAAGAAGCCCCAGAAGCAGCAACGCTACGACAATCATCGAAGTAATAAACGAAGGGATGACTGGAATCGCAACAGGGACCGCATCAACGGCTTTCCACGGGCCGCCGACGAGCTAGACACAAGTAACGAAAGTGCTCAGCCGTCACCCGAAAAGCAGCAAACGACGCAGCAGCAAATATCTCCCAGGAGAGCTCAACCGCCTCCACCGGCGGATAATGAAAAGCTATCGCAGCGGGAGAAACTCATACGCGATATCGAGCAGCGGCGGTTGGAGTGTCTGGTGTGCGTGGAGGCGATCAAGGCGCACCAACCGACGTGGTCTTGCCAAAACTGCTACCACGTTCTCCACCTGAAGTGCACTATAACATGGGCGAGTAGCTCGAAATCGGATGTCGGATGGCGGTGCCCAGCCTGTCAGAATGTCCTCCAAGAGCTGCCTCGAGAGTATCTCTGCTTTTGCGGAAAACTCAAAAACCCCCCGGTGTCCCGCACCGAACTGGCGCACAGCTGCGGAGAGGTATGTTGCCGGATTGAAGGCTGCAGCCACGCTTGCACACTTCTTTGCCATCCGGGCCCCTGCCCACCGTGCCAGGCCAACGTGGTGCGAAGCTGTGGTTGCGGGCGCAGCTCCAAGACTATGCAGTGCGCCATGAAAGAAGATCTTCTATGCGGCGAGATCTGTGACAAGCCGCTCAACTGTGGCGAGCATCGATGCCGCGCCGAGTGCCACGCGGGCAAGTGCGCAGCTTGCTCGGAGCAGGTTGAGCAGCACTGCCACTGTGGCAAGCAAGAGCGCCAAGTGCAGTGCACCCGCGAGAACCAAGACAAAAGAAGCTACTCATGTAAGGAAAGTTGCGGGAAGCCTCTGCCATGTGGCAACCACAAGTGCAAGGACTCATGTCACGCAGGCAGCTGCAGACCTTGTAAGCTGAGTCCAGAACAGATAACCAGCTGTCCGTGCGGTAAGATGCCCATCCCGGCTGCCCAACGTACGAGCTGCCTAGATCCCATACCGACATGTGAAGGAATCTGCTCGAGGACGCTTCGCTGCGGTAAACCAGCTCATCCGCACCAATGCGCCAGCAAGTGTCACCTGGGCCAGTGCCCGCCGTGTCCCAAGCAAACGGCAGTGAAGTGTCGCTGCGGCCACATGGATCAGATGATCAAGTGCAGACAGTTGTCCACGCGGGCGGACGATGCCCGCTGCAAGCGACGCTGCACGAAGAAGCGCAGCTGTGGCAAGCATAAATGCAATGCCGAGTGCTGTATCGACATAGATCACGCCTGCCCGCTTCCCTGCAACCGCACACTGAGCTGCGGCAAGCACAAGTGTGATCAGCCCTGCCATCGCGGCAACTGTCCACCGTGTTATCGCAGCAGCTTTGAGGAGCTTTACTGCGAGTGCGGGGCTGAAGTGATATATCCGCCGGTGCCGTGCGGCACCAAAAAGCCGCTCTGTAAACGCCCCTGCTCCCGATCGCATCCCTGCGAGCATCCGCCGCAGCACAACTGCCATTCGGCGGCTACATGTCCGCCCTGCATGATGTTCACTACCAAGTTTTGCCACGGCGGCCACGAGCAGCGGAAGACTATTCCCTGTTCGCAGGCCAACTTTAGCTGTGGTTTGGCGTGCGGAAAGCCATTACCTTGCGGCCGCCATAAATGCATCAAGCCGTGTCACGAGGGCGCCTGCCAAAGTGCCGGCGAGATATGTCGTCAAAGCTGCACCAAACCGCGAGCAATCTGTGGTCATAAATGTGCTGCCCCCTGTCATGAAGACGTCTGTCCCGAGACGCCGTGCAAGGAGCTGGTTGAGGTTCAGTGCGAATGTGGTCACCGGAAGCAAAGTCGCAGCTGCCAGGAGCTGGCTAGGGAGCACAGTCGCATTGCCACTGCCCAGTTGGCCTCATCAATGGCGGAGATGTCGCGCGGAAACTACATGGAGCTGAGCGAAATCCTGGCTCCGGCTAAGACTAACAAATCCAACCGCACTCTGGACTGCAATGACGAATGCCGGCTGCTGGAGCGAAATCGTCGACTCGCTTTCGCCTTGTCATCGGGAAACCCAGACACGAAGCAAAAATCGTTGACTAAGTACTCTGAGTTTGTTCGCAGCTTTGCGAAGAGGAATCCGGCTCTGACCAAGAGCGTGTACGAAACTCTAAGCGATCTGGTGAAGCTGGCAAAGGAGAGCAAGCAGCGGTCGCGGAGCCACTCCTTCCCCACGATGAACCGAGAGAAACGGCAATTGGTGCACGAGCTGTGCGAGATATTTGGTATTGAATCGGTTTCCTACGACAAGGAGCCCAATAGGAATGTTGTGGCCACGGCCCACAAAGAAaggTGCTGGCTGCCGGCCACGAGCATCATGGAGGTTCTGGCTCGAGAGTCCGGACAGCGTCGAGTCCCTGTACCCAGCAACAATGCATggagcttaaaaaaatag
Protein Sequence: MDEYWQQLTNGVDRGGAAANESAVVYNGHGHEAPAQASGNSASGATSNSNNNYVNFNQFIQQHNLGGGSSPTASTGTMIHPLSSVNNTNYNIGGGGGAFGLNPPVAPSVNSNSFGHLYSQPIFPAYQNGEGAASFTNSYDDTFSNLYTPFGNNPFDFSSSKLQASAPEFVPNLAKLSLNETPAATTPNGNRNFTASQETAISVTGTRTPQPGGSSGSGGLSERGDPHHLRLAGNNYERDRGDRDSRPGSTRQQRRSDYRDDREDRYERNDRKKPQKQQRYDNHRSNKRRDDWNRNRDRINGFPRAADELDTSNESAQPSPEKQQTTQQQISPRRAQPPPPADNEKLSQREKLIRDIEQRRLECLVCVEAIKAHQPTWSCQNCYHVLHLKCTITWASSSKSDVGWRCPACQNVLQELPREYLCFCGKLKNPPVSRTELAHSCGEVCCRIEGCSHACTLLCHPGPCPPCQANVVRSCGCGRSSKTMQCAMKEDLLCGEICDKPLNCGEHRCRAECHAGKCAACSEQVEQHCHCGKQERQVQCTRENQDKRSYSCKESCGKPLPCGNHKCKDSCHAGSCRPCKLSPEQITSCPCGKMPIPAAQRTSCLDPIPTCEGICSRTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPLCKRPCSRSHPCEHPPQHNCHSAATCPPCMMFTTKFCHGGHEQRKTIPCSQANFSCGLACGKPLPCGRHKCIKPCHEGACQSAGEICRQSCTKPRAICGHKCAAPCHEDVCPETPCKELVEVQCECGHRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPAKTNKSNRTLDCNDECRLLERNRRLAFALSSGNPDTKQKSLTKYSEFVRSFAKRNPALTKSVYETLSDLVKLAKESKQRSRSHSFPTMNREKRQLVHELCEIFGIESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWSLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00539339;
90% Identity: iTF_00489062;
80% Identity: -