Basic Information

Insect: Drosophila merina
Gene Symbol: stc
Assembly: GCA_035047645.1
Location: JAWNPH010000055.1:17404689-17408258[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 2.1e+04 -4.2 1.6 15 19 430 434 429 434 0.81

2 14 0.069 7.2e+02 0.6 2.5 4 11 463 470 462 471 0.92

3 14 6.1e-07 0.0063 16.7 15.1 1 19 475 492 475 492 0.93

4 14 3.1e-06 0.032 14.5 9.5 1 19 528 546 528 546 0.95

5 14 2 2.1e+04 -6.3 3.9 7 13 550 556 550 557 0.74

6 14 2e-09 2e-05 24.7 13.7 1 19 586 604 586 604 0.98

7 14 0.00015 1.5 9.1 18.0 4 19 652 667 645 667 0.88

8 14 0.074 7.6e+02 0.5 11.9 1 11 707 717 707 729 0.79

9 14 5e-10 5.1e-06 26.6 15.5 1 18 734 751 734 752 0.97

10 14 1.8 1.8e+04 -3.9 0.9 6 10 781 785 781 786 0.81

11 14 2 2.1e+04 -9.2 11.6 10 18 799 808 788 809 0.71

12 14 1.2 1.2e+04 -3.4 1.3 8 13 814 819 813 820 0.80

13 14 8.8e-09 9.1e-05 22.6 10.1 1 16 845 860 845 867 0.87

14 14 6.8e-07 0.0071 16.6 15.8 1 19 877 896 877 896 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	2.1e+04	-4.2	1.6	15	19	430	434	429	434	0.81
2	14	0.069	7.2e+02	0.6	2.5	4	11	463	470	462	471	0.92
3	14	6.1e-07	0.0063	16.7	15.1	1	19	475	492	475	492	0.93
4	14	3.1e-06	0.032	14.5	9.5	1	19	528	546	528	546	0.95
5	14	2	2.1e+04	-6.3	3.9	7	13	550	556	550	557	0.74
6	14	2e-09	2e-05	24.7	13.7	1	19	586	604	586	604	0.98
7	14	0.00015	1.5	9.1	18.0	4	19	652	667	645	667	0.88
8	14	0.074	7.6e+02	0.5	11.9	1	11	707	717	707	729	0.79
9	14	5e-10	5.1e-06	26.6	15.5	1	18	734	751	734	752	0.97
10	14	1.8	1.8e+04	-3.9	0.9	6	10	781	785	781	786	0.81
11	14	2	2.1e+04	-9.2	11.6	10	18	799	808	788	809	0.71
12	14	1.2	1.2e+04	-3.4	1.3	8	13	814	819	813	820	0.80
13	14	8.8e-09	9.1e-05	22.6	10.1	1	16	845	860	845	867	0.87
14	14	6.8e-07	0.0071	16.6	15.8	1	19	877	896	877	896	0.96

Sequence Information

Coding Sequence: ATGGCAGAGTACTGGCAGCAGCTGACGAACGGAGGCGGAAGCGGAGCAGGCACCGGTGATTCATCGGTGGGATGCAACGGAGCCGGGCCTGAGGCTGTGCCGCACAGCAGCGGTAATAACAACTACGTCAACTTCAACCAGTTCATCATGCAGCACAACCTTGGAGGAGGAACACCTAGTGCCTCGAACGCAACCAGCAGCACCATGCAACATCCTTTGGGAAGTGGAAACAACATGAACTTTGCCATTAGTGGAGGCGGAGGAGCATTCGGTCTCAATCCACCAACGGCATCAACGAATTCCAATTCTTTCGGGCATTTTTATTCACAGCCCATATTCCCTTCGTATCAAAATGGCGACGGAATTTCCAGTGCCACTTTCACCAATAGCTACGGAACGGGTGATgccaccagcaacaacagcagtcCATTTTTGAACCTCTACACGCCGTTTGGCAACAATCCGTTTGACTTTAGCGCTTCCAAGCTTCAGGCATCGGCGCCCGAATTTGTGCCTAATCTGGCCAAGCTGAGTCTAGAGGAGACTCCGGTGGCCACGACGAACGGAAACAGCACTGCCAGCCCAAAAACTGCCATAAAGGAGACGGAGGTGCCATCTGGGGCAGGACCATCACGACCAGCAGGAGGCGTAGGAGCAACAGGAGGAGCAAGAACAGAGGAAAGAGGAGGCAACAGTTTCCGCCAGAACCACAATTACGAGAGAGATCGGGATAGGGAACGCGATCGTGACCGAGACCGGGATCGGGAGAGGGATAGGGATCGGCCGCGACAGCAGCGTCGCTCGGATTACCGAGAGGATCGTGAAGATCGCTACGATAGGAATGATCGTGACCGGGACAGGGACCGGGACCGAGACCGGGATAGAGACCGCAAGAAGCcacagaagcagcagcgcTACGACAATCATCGCAGCAATAAGCGGCGCGATGATTGGAACCGCAACAGGGATCGAATCAACGGATATCCTCGTGCCGTTGACGACTTGGACACAAGCAACGAGAGTGCCCAACCATCGCCCGAAAAGCAgccgcagcaacagcaaatcTCGCCAAGAAGAAATCCTCCGCCACCGGCGGACAATGAAAAGCTATCCCAAAGGGAGAAGCTAATACGTGACATTGAGCAAAGGCGGCTTGAGTGTTTGGTGTGCGTGGAAGCCATCAAAGCGCATCAGCCGACATGGTCGTGCCAGAACTGTTACCATGTTCTCCACCTCAAGTGTACCACCACTTGGGCGAGCAGCTCCAAATCGGAAGTGGGCTGGCGCTGTCCAGCGTGCCAGAATGTGCTACAAGAGCTACCGCGCGAGTACCTCTGTTTCTGCGGAAAGCTGAAAAACCCACCTGTTTCGCGGTCCGAATTACCGCACAGTTGCGGAGAGGTGTGTTGCCGAATCGAGGGATGCAGTCATGCCTGCACGCTGCTCTGTCACCCGGGTCCTTGTCCTCCTTGCCAGGCCAATGTGGTTCGCAGCTGCGGCTGTGGAAAGAGCACCAAGACGATGCAGTGCGCCATGAAGGAGGATCTGCTGTGTGGCGAGACCTGCGACAAGCTTCTTAACTGCGCCGAGCACCGATGCAAGTCGGAGTGCCATGCAGGCAAGTGTGCTGCTTGCTCGGAACAGGTGGAGCAGCATTGTCATTGTGGCAAGCAGGAGCGCCAGGTGGCATGTACACGAGAAAGCCAGGATAAAAGAAGCTACTCGTGCAAGGAGAGCTGCGGCAAGCCATTGCCCTGCGGCAATCACAAATGCAAAGACTCTTGCCACGCTGGCAACTGCAGgCCCTGCAAACTGAGCCCCGATCAAATAACCAGTTGCCCCTGTGGCAAGATGCCTGTGCCTGCTACCCAGCGCACCAGTTGCCTAGATCCCATTCCAACATGTGAAGGAATCTGCTCGCGTACTTTGCGCTGTGGAAAGCCGGCGCATCCACATCAGTGCGGCAGCAAGTGCCACCTGGGTCAGTGTCCGCCGTGCCCCAAGCAAACGGCGGTCAAGTGCCGCTGCGGTCACATGGATCAAATGATCAAATGTCGTCAGTTATCCACGAGAGCGGATGACGCTCGCTGCAAGCGCCGCTGCACGAAGAAGCGTAGCTGCGGCAAGCACAAGTGCAACGCCGAGTGCTGCATCGACATCGACCACGCTTGTCCGCTGCCCTGCAACCGGACCTTGAGTTGCGGCAAACACAAATGCGACCAGCCCTGCCATCGTGGCAACTGCCCTCCTTGCTACCGCAGCAGCTTCGAGGAGCTCTACTGCGACTGCGGAGCAGAGGTGATCTATCCGCCGGTGCCGTGCGGCACCAAGAAACCTCTTTGCAAGCGGCCCTGCTCGCGATCGCATCCCTGCGAGCATCCGCCGCAACACAATTGCCACTCGGCGGCCACTTGCCCGCCTTGCATGATGTTCACCACCAAGTCATGCCATGGGGGTCACGAGCAGCGCAAGACCATTCCCTGCTCCCAAGACAGTTTCAGCTGTGGAATGGCCTGCGGGAAGCCATTGCCCTGTGGACGCCACAAGTGCATCAAGCCATGCCACGAGGGTGCCTGCCAGGCAGCCGGCGACGTTTGCCGCCAGAGCTGCACCAAACCGCGAGCTACTTGCGGCCACAAGTGCTCAGCGCCCTGCCATGAGGGCTCCTGTCCCGAGACACCCTGCAAGGAGCTAGTGGAGGTGCAATGCGAGTGCGGTAATCGGAAACAGAGTCGCAGCTGCCAGGAGCTGGCCCGCGAGCACAGCCGCATCGCCACCGCTCAGCTGGCATCATCCATGGCGGAGATGTCGCGAGGAAATTATATGGAGCTAAGCGAGATCCTGGCTCCTTCCAAGGCCAACAAGTCCAACCGAACTTTGGACTGCAACGATGAATGCCGACTGCTGGAGCGGAATCGTCGCCTTGCTATGGCCCTGTCGTCTCGAAATCCAGACACACAGCAGAAGACCCTGACCAAGTACTCGGAGTTCGTGAAAGGTTTCGCCAAGAGGAACCCGGTGCTGACCAAAAGTGTATACGAAACGCTGACCGACCTGGTTAAGCTGGCCAAGGAGAGTAAGCAGCGGTCGCGAAGCCACTCTTTTCCGACCATGAACCGCGAAAAGAGGCAGTTGGTGCATGAGCTGTGCGAAATATTCGGCATAGAATCTGTGTCCTACGACAAGGAACCCAATCGAAATGTGGTGGCCACGGCGCACAAGGAAAGGTGCTGGTTTCCGGCCACGAGTATCATGGAGGTTCTGGCTCGGGAGTCTGGACAACGGCGCGTCCCTGTACCCAGCAACAATGCATGGAGCTTAAAGAAATAG
Protein Sequence: MAEYWQQLTNGGGSGAGTGDSSVGCNGAGPEAVPHSSGNNNYVNFNQFIMQHNLGGGTPSASNATSSTMQHPLGSGNNMNFAISGGGGAFGLNPPTASTNSNSFGHFYSQPIFPSYQNGDGISSATFTNSYGTGDATSNNSSPFLNLYTPFGNNPFDFSASKLQASAPEFVPNLAKLSLEETPVATTNGNSTASPKTAIKETEVPSGAGPSRPAGGVGATGGARTEERGGNSFRQNHNYERDRDRERDRDRDRDRERDRDRPRQQRRSDYREDREDRYDRNDRDRDRDRDRDRDRDRKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRAVDDLDTSNESAQPSPEKQPQQQQISPRRNPPPPADNEKLSQREKLIRDIEQRRLECLVCVEAIKAHQPTWSCQNCYHVLHLKCTTTWASSSKSEVGWRCPACQNVLQELPREYLCFCGKLKNPPVSRSELPHSCGEVCCRIEGCSHACTLLCHPGPCPPCQANVVRSCGCGKSTKTMQCAMKEDLLCGETCDKLLNCAEHRCKSECHAGKCAACSEQVEQHCHCGKQERQVACTRESQDKRSYSCKESCGKPLPCGNHKCKDSCHAGNCRPCKLSPDQITSCPCGKMPVPATQRTSCLDPIPTCEGICSRTLRCGKPAHPHQCGSKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCDCGAEVIYPPVPCGTKKPLCKRPCSRSHPCEHPPQHNCHSAATCPPCMMFTTKSCHGGHEQRKTIPCSQDSFSCGMACGKPLPCGRHKCIKPCHEGACQAAGDVCRQSCTKPRATCGHKCSAPCHEGSCPETPCKELVEVQCECGNRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPSKANKSNRTLDCNDECRLLERNRRLAMALSSRNPDTQQKTLTKYSEFVKGFAKRNPVLTKSVYETLTDLVKLAKESKQRSRSHSFPTMNREKRQLVHELCEIFGIESVSYDKEPNRNVVATAHKERCWFPATSIMEVLARESGQRRVPVPSNNAWSLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00539339;
90% Identity: iTF_00539339;
80% Identity: -