Dosh006193.1
Basic Information
- Insect
- Drosophila oshimai
- Gene Symbol
- stc
- Assembly
- GCA_018150695.1
- Location
- JAECWM010000083.1:2222272-2226254[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 2 1.7e+04 -4.1 1.6 15 19 394 398 393 398 0.81 2 13 0.046 4e+02 1.1 2.2 4 11 427 434 426 435 0.91 3 13 5.7e-07 0.005 16.8 15.1 1 19 439 456 439 456 0.93 4 13 3.4e-07 0.003 17.5 13.4 1 19 492 510 492 510 0.99 5 13 2 1.7e+04 -6.2 3.9 7 13 514 520 514 521 0.74 6 13 3.4e-09 2.9e-05 23.9 13.6 1 19 550 568 550 568 0.98 7 13 0.00014 1.2 9.2 18.0 4 19 616 631 609 631 0.88 8 13 0.057 4.9e+02 0.8 11.6 1 11 671 681 671 693 0.79 9 13 4.6e-10 4.1e-06 26.7 15.5 1 18 698 715 698 716 0.97 10 13 1.6 1.4e+04 -3.8 0.9 6 10 745 749 745 750 0.81 11 13 2 1.7e+04 -9.8 11.4 10 18 763 772 752 773 0.69 12 13 3.2e-07 0.0028 17.6 12.8 1 17 809 825 809 831 0.93 13 13 6.7e-07 0.0059 16.6 13.4 1 19 841 860 841 860 0.96
Sequence Information
- Coding Sequence
- ATGGCGGAGTACTGGCAGCAGCTTTCCAACGGAGGCGGAGGAGCTTCTGGCAGTGAATCACCTATGACCTGCAACGGTAGAGAACACGAAACGCAGCCAGCGGTTCCTAACAACAACACCACCAACAACAACTACGTGAACTTCAATCAGTTCATCATGCAGCACAATCTGGGCGTGGGATCGTCCTCCAATGGAGCCTCCTCCACCATGCAACATCCACTGGGCAACAGCAGCAACACCAACTTCTCCATTGGCGGTGGCGGAGGAGCCTTTGGTCTGAATCCACCAGTGGCACCAGCGAACTCCAACAGCTTTGGAAATTTTTATTCGCAGCCCATATTCCCATCTTATCAAAATGGCGATGGCATCGCTAGCGCCGCCTTCACTAATAGCTATGGATCGGATAACCCGAGCAGCAGCACCTTTTCGAGCCTTTACACCCCGTTTGGAAACAACCCGTTTGACTTCAGTGCTTCCAAGCTGCAGGCCTCGGCGCCCGAATTTGTACCTAACCTGGCCAAGCTGAGTCTCGAGGAGACTGCTTCCGCCACGACGAATGGGAATAGCACTGCCAGCTTAGACACTGCCATAAATGAGGCGAGACCAAGGGCTTTGCCAGTCGGTGGAACCTTTGAAAGAGGAGCAGTTAACCCCCGCTCAAACCACAACTACGAAAGGGAGCGCGACAGGGACTCGCGACCTGGTAGCACGCGTCAGCAGCGTCGCTCAGACTACCGCGATGATCGGGAGGATCGAAGGGAGAGAGAGGATCGATATGATCGCAGGAAGCCACAGAAACAGCAGCGCTACGACAATCACCGCAGCAACAAAAGGAGGGATGACTGGAATCGCAACAGGGACCGCATCAATGGGTTTCCAAGGGCCGTCGATGATCTGGACACGAGCAATGAGAGTGCACAGCCGTCGCCAGAGAAGCAGTCCCAGCAGCAACAGATCTCCCCCAGAAGAGCTCCTCCGCCTGCAGCTGATAACGAGAAGCTGTCCCAAAGGGAGAAACTAATCCGAGACATTGAACAGCGGAGATTGGAGTGCCTGGTGTGCGTGGAGGCCATTAAGGGTCATCAGCCGACCTGGTCGTGCCAGAACTGCTACCATTTACTGCACCTCAAGTGCACTATCACCTGGGCCAGTAGCTCTAAGTCTGAGGTGGGCTGGCGATGCCCGGCCTGCCAGAACGTGCTACAAGAGCTGCCTCGAGACTATCTGTGCTTCTGCGGGAAGCTGAAGAACCCGGTTGTTTCCCGAACGGAGCTCGCACACAGTTGTGGGGAGGTCTGCTGCAGGATTGAGGGCTGCAGCCATGCGTGCACCCTGCTCTGCCACCCGGGACCGTGTCCACCATGCCAGGCAAATGTTGTGCGCAGCTGCGGCTGCGGACGCAGCTCCAAGACCATGCAGTGCGCCATGAAGGAGGAGCTTCTCTGCAGCGAGATCTGCGACAAAACGCTGAACTGCGGCGAGCATCGTTGCAAAGCCGAGTGCCACTCGGGCAAGTGCACCGCCTGTCCTGAGCAGGTAGAGCAGCACTGTCACTGCGGCAAGCAGGAGCGACAAGTGCAGTGCACGCGCGAAAACCAGGACAAGCGCAGCTACTCCTGCAAGGACAGTTGCGGCAAGCCGCTGCCCTGCGGCAACCACAAGTGCAAGGACTCCTGCCATGCGGGCAGCTGCAGGCCCTGCAAGCTGAGTCCCGAGCAGATAACAAGCTGTCCCTGCGGCAAGATGCCTGTGCCGGCTGCCCAGCGTTCTAGCTGCCTCGATCCCATACCTACGTGCGAGGGCATCTGCTCCAGGACTTTGCGATGCGGAAAACCAGCGCATCCGCACCAGTGCGGCAGCAAGTGCCACCTGGGTCAGTGTCCGCCGTGTCCCAAGCAGACGGCGGTAAAATGTCGCTGCGGCCACATGGACCAGATGACCAAATGCCGCCAGCTGTCCAGCCGGGCGGACGATGCCCGCTGCAAGCGTCGTTGCACCAAGAAGCGCAGCTGCGGCAAGCACAAGTGCAACGCGGAGTGTTGCATCGATATTGACCACGCCTGTCCGCTGCCTTGCAATCGAACTTTGAGTTGTGGCAAGCACAAGTGCGATCAGCCATGTCATAGGGGCAATTGTCCACCTTGCTACCGAAGCAGCTTCGAGGAGCTCTACTGCGAGTGTGGGGCGGAGGTCATCTATCCACCAGTGCCGTGTGGAACCAAAAAACCCATCTGCAAGCGACCCTGTTCGCGTTCGCATCCCTGCGAGCATCCGCCGCAGCACAACTGCCACTCGGCGGTCACCTGTCCGCCCTGCATGATGTTCACCACCAAGTTTTGCCATGGAAACCACGAGCAGCGCAAGACCATTCCCTGCTCGCAGCCCAACTTCAGCTGTGGCTTGGCTTGTGGCAAACCGCTGCCCTGCGGCCGTCACAAGTGCATCAAGCCCTGCCACGAGGGCGGTTGTCAAACAACAGGAGAGATCTGCCGTCAGAGCTGCACCAAGCCGAGATCAAACTGTGGTCATAAGTGTGCTGCTGCTTGTCACGAGGGCTCCTGTCCGGAGTCGCCATGCAAGGAGCTGGTAGAGGTTCAGTGCGAGTGCGGCCACCGCAAGCAGAGCCGAAGCTGCCAGGAGCTGGCCAGGGAGCACAGCCGCATCGCCACCGCCCAGCTGGCCTCCTCCATGGCCGAGATGTCGCGCGGCAACTACATGGAGCTCAGCGAAATCCTGGCCCCGGCCAAGGCCAGCAAGTCCAACAGAACACTTGATTGCAACGACGAATGCCGGCTGCTTGAGAGGAATCGTCGCCTGGCCGTGGCACTGTCGTCGCGCAATCCGGACACTCAACAAAAGTCGCTGACTAAGTACTCAGAGTTTGAAAGCAAGCAGCGGTCAAGAAGCCACTCCTTTCCCACCATGAACCGGGAGAAGAGGCAGCTGGTGCACGAGCTGTGCGAGATATTCGGCATAGAGTCCGTTTCCTACGACAAGGAGCCCAACCGCAATGTGGTGGCCACCGCCCATAAGGATAGGTGCTGGCTGCCTGCCACGAGCATCATGGAGGTACTGGCTCGCGAATCCGGACAGCGCCGTGTCCCTGTGCCCAGCAACAATGCATGGGGCTTGAAGAAGTAG
- Protein Sequence
- MAEYWQQLSNGGGGASGSESPMTCNGREHETQPAVPNNNTTNNNYVNFNQFIMQHNLGVGSSSNGASSTMQHPLGNSSNTNFSIGGGGGAFGLNPPVAPANSNSFGNFYSQPIFPSYQNGDGIASAAFTNSYGSDNPSSSTFSSLYTPFGNNPFDFSASKLQASAPEFVPNLAKLSLEETASATTNGNSTASLDTAINEARPRALPVGGTFERGAVNPRSNHNYERERDRDSRPGSTRQQRRSDYRDDREDRREREDRYDRRKPQKQQRYDNHRSNKRRDDWNRNRDRINGFPRAVDDLDTSNESAQPSPEKQSQQQQISPRRAPPPAADNEKLSQREKLIRDIEQRRLECLVCVEAIKGHQPTWSCQNCYHLLHLKCTITWASSSKSEVGWRCPACQNVLQELPRDYLCFCGKLKNPVVSRTELAHSCGEVCCRIEGCSHACTLLCHPGPCPPCQANVVRSCGCGRSSKTMQCAMKEELLCSEICDKTLNCGEHRCKAECHSGKCTACPEQVEQHCHCGKQERQVQCTRENQDKRSYSCKDSCGKPLPCGNHKCKDSCHAGSCRPCKLSPEQITSCPCGKMPVPAAQRSSCLDPIPTCEGICSRTLRCGKPAHPHQCGSKCHLGQCPPCPKQTAVKCRCGHMDQMTKCRQLSSRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPICKRPCSRSHPCEHPPQHNCHSAVTCPPCMMFTTKFCHGNHEQRKTIPCSQPNFSCGLACGKPLPCGRHKCIKPCHEGGCQTTGEICRQSCTKPRSNCGHKCAAACHEGSCPESPCKELVEVQCECGHRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPAKASKSNRTLDCNDECRLLERNRRLAVALSSRNPDTQQKSLTKYSEFESKQRSRSHSFPTMNREKRQLVHELCEIFGIESVSYDKEPNRNVVATAHKDRCWLPATSIMEVLARESGQRRVPVPSNNAWGLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00539339;
- 90% Identity
- -
- 80% Identity
- -