Basic Information

Insect: Drosophila subpulchrella
Gene Symbol: stc
Assembly: GCA_014743375.2
Location: NC:23490560-23495455[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 1.5e+04 -4.1 1.6 15 19 405 409 404 409 0.81

2 13 0.048 3.5e+02 1.1 2.2 4 11 438 445 437 446 0.91

3 13 6e-07 0.0044 16.7 15.1 1 19 450 467 450 467 0.93

4 13 3.7e-07 0.0027 17.4 12.2 1 19 503 521 503 521 0.99

5 13 2 1.5e+04 -6.3 3.9 7 13 525 531 525 532 0.74

6 13 3.5e-09 2.6e-05 23.9 13.6 1 19 561 579 561 579 0.98

7 13 0.00014 1 9.1 18.0 4 19 627 642 620 642 0.88

8 13 0.06 4.4e+02 0.8 11.6 1 11 682 692 682 704 0.79

9 13 4.8e-10 3.5e-06 26.6 15.5 1 18 709 726 709 727 0.97

10 13 1.7 1.3e+04 -3.9 0.9 6 10 756 760 756 761 0.81

11 13 2 1.5e+04 -9.1 11.6 10 18 774 783 763 784 0.71

12 13 1.2e-08 8.8e-05 22.2 10.7 1 17 820 836 820 842 0.94

13 13 5.2e-07 0.0038 16.9 13.1 1 19 852 871 852 871 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	1.5e+04	-4.1	1.6	15	19	405	409	404	409	0.81
2	13	0.048	3.5e+02	1.1	2.2	4	11	438	445	437	446	0.91
3	13	6e-07	0.0044	16.7	15.1	1	19	450	467	450	467	0.93
4	13	3.7e-07	0.0027	17.4	12.2	1	19	503	521	503	521	0.99
5	13	2	1.5e+04	-6.3	3.9	7	13	525	531	525	532	0.74
6	13	3.5e-09	2.6e-05	23.9	13.6	1	19	561	579	561	579	0.98
7	13	0.00014	1	9.1	18.0	4	19	627	642	620	642	0.88
8	13	0.06	4.4e+02	0.8	11.6	1	11	682	692	682	704	0.79
9	13	4.8e-10	3.5e-06	26.6	15.5	1	18	709	726	709	727	0.97
10	13	1.7	1.3e+04	-3.9	0.9	6	10	756	760	756	761	0.81
11	13	2	1.5e+04	-9.1	11.6	10	18	774	783	763	784	0.71
12	13	1.2e-08	8.8e-05	22.2	10.7	1	17	820	836	820	842	0.94
13	13	5.2e-07	0.0038	16.9	13.1	1	19	852	871	852	871	0.96

Sequence Information

Coding Sequence: ATGGCTGAGTACTGGCAACAGTTGACCAATGGCGGCGGAGGAGCAGGACAGGGCAATGAGTCACCTGCCCTGGCCGCCGCCTGCAATGGAGGTCACGAAGCGCCCGGAGTGGGTGGCCACAACAGCGCCcacggcaacaacaactatGTGAACTTCAATCAGTTCATTATGCAGCACAATCTGGGCGGAGGAGCGTCCCCCAATGCCGGAGGCACCATGCAACATCCTCTGGGCAGCAgtggcagcaacagcaacagcaactacTCCGtcggcggcggcggaggagcCTTCGGACTGAatccaccagcagcagcaacaaactCTAACAACTTTGCGAATTTTTACTCGCAGCCCATATTCCCATCGTATCAAAATGGCGATGGCATCGCTAGCGCCGCCTTTACAAACAGCTATGAATCGGGCCATccgagcagcagcagcaatttTTCGAGTCTTTACACACCGTTTGGCATGAATCCGTTCGACTTCAGCGCTTCCAAGCTGCAGGCCTCGGCGCCCGAATTCGTGCCCAGTCTGGCCAAGCTGAGTCTAGATGAGACTCCGGCCGCCACGACAAATGGGAACAGCACTGCCAGCCAAGAGACTGCCATAAATGAGCCGAGACCCAGGACTCTGCAGGCCGAGGGAGCAGCTGAAAGAGGAGGCAACAACCACCGCTCGAACCACAACTACGAAAGGGAGCGGGACAGGGATTCGAGACCCGGCAGCACGCGTCAGCAGCGACGCTCTGACTATCGCGACGAGCGGGAGGATCGAAGGGAGAGAGAGGACCGCTACGAGCGAAACGATCGCAGGAGGCCGCAGAAGCAGCAACGCTACGACAATCATCGCAGCAACAAGCGCAGGGATGACTGGAATCGAAACAGGGACCGCATCAACGGTTTTCCTCGGGCCGTTGATGATCTGGACACGAGCAACGAGAGTGCCCAACCGTCACCCGAGAAGCAGtcgcaacagcagcagataTCCCCACGCAGGGCTCCGCCGCCGCCAGCACCGGATAACGAGAAGCTATCGCAGCGGGAGAAACTGATTCGCGACATCGAACAGCGCCGACTGGAGTGCCTGGTGTGTGTGGAGTCTATCAAGGCGCATCAGCCGACCTGGTCGTGCCAGAACTGCTACCACTTACTCCACCTTAAGTGCACCATCACTTGGGCGAGCAGCTCCAAGTCCGATGTGGGATGGCGTTGTCCTGCTTGTCAGAATGTGCTGCAGGACCTGCCCCGGGAGTATCTCTGCTTCTGCGGAAAGCTGAAGAACCCGCCGGTGTCGCGGACCGAGTTGGCCCACAGTTGTGGCGAGGTCTGCTGCCGCATAGAGGGATGCAGCCACGCCTGCACTCTGCTCTGTCACCCGGGTCCCTGTCCGCCGTGCCAGGCCAACGTGGTGCGCAGCTGTGGCTGTGGACGCAGCTCCAAGACGATGCAATGCGCCATGAAGGAGGAGCTCCTATGTGGCGAGATCTGTGACAAGCCGCTTAACTGCGGCGAGCATCGCTGCCGGGCAGAGTGCCACTCGGGCAAGTGCGCCGCGTGTCCCGAGCAGGTGGAGCAGCACTGCCACTGCGGCAAGCAGGAGCGACAGGTGCAGTGCACGCGCGAGAGCCAGGATAAGCGTAGCTATTCCTGCAAGGAGAGCTGCGGCAAGCCGCTACCCTGCGGCAATCACAAGTGCAAGGACTCCTGTCATGCGGGCAGCTGCAGACCCTGTAAGCTCAGTCCCGAGCAGATAACCAGTTGTCCTTGTGGCAAGATGCCAATACCGGCTGCTCAGCGTTCTAGCTGCCTTGATCCCATCCCCACTTGCGAGGGCATCTGCTCCAGGACGCTACGCTGCGGAAAGCCGGCTCATCCGCATCAGTGCGGCAGCAAGTGCCACCTGGGCCAGTGTCCCCCGTGTCCCAAGCAGACGGCGGTGAAGTGTCGTTGCGGCCACATGGACCAGATGATCAAATGCCGGCAGCTTTCCAGCCGGGCGGACGATGCTCGCTGCAAGCGTCGTTGCACCAAGAAGCGCAGCTGCGGCAAGCACAAGTGCAATGCCGAGTGCTGCATCGACATAGACCACGCTTGTCCGCTGCCCTGTAACCGAACCTTGAGTTGCGGCAAGCACAAGTGCGATCAGCCGTGCCATCGTGGCAATTGTCCGCCATGCTATCGTAGCAGCTTCGAGGAGCTCTACTGCGAGTGTGGCGCTGAAGTGATTTATCCGCCGGTGCCATGCGGCACCAAGAAGCCAATCTGTAAGCGTCCTTGCTCGCGCTCCCATCCCTGCGAGCATCCGCCTCAACACAACTGCCATTCGGCGGCCACCTGTCCGCCCTGCATGATGTTCACCACGAAGTTCTGCCACGGCAACCACGAGCAGCGCAAAACCATTCCCTGCTCGCAGCCCAACTTCAGCTGCGGCCTGGCCTGTGGCAAGCCGTTGCCCTGTGGTCGCCACAAGTGCATCAAGCCATGCCACGAAGGCGCCTGTCAGTCAGCCGGCGAGATTTGTCGCCAGAGCTGTACTAAGCCGCGATCAAACTGTGGTCACAAGTGTGCGGCCGCTTGTCACGAGGGAGCCTGTCCGGAAACGCCTTGCAAGGAGCTGGTGGAGGTGCAGTGCGAGTGCGGCCACCGGAAGCAGAGCCGCAGCTGCCAGGAGCTGGCCAGGGAGCACAGTCGCATAGCCACCGCTCAGCTGGCCTCTTCCATGGCGGAAATGTCTCGCGGAAATTACATGGAGCTTAGCGAAATCTTGGCACCAGCCAAGGCTAACAAGTCTAATAGAACTCTGGATTGCAACGATGAATGCCGTTTGCTGGAGAGGAATCGTCGTCTGGCTGTGGCCTTGTCCTCAGGAAATCCCGATACAAAGCAAAAAACCCTGACCAAGTACTCGGAATTCGTACGTGGCTTCGCAAAGAGAAACCCGGCGCTGACCAAGAGCGTTTACGAGACGCTGACTGATTTGGTGAAGCTGGCCAAGGAGAGCAAGCAGCGCTCGAGGAGCCACTCCTTCCCCACGATGAACCGCGAGAAGAGGCAGCTAGTGCACGAGCTGTGCGAGATATTTGGCATAGAGTCGGTCTCCTACGACAAGGAGCCCAATCGCAATGTCGTGGCTACGGCCCACAAGGAAAGGTGCTGGTTTCCTGCTACGAGCATCATGGAGGTGCTGGCACGCGAGTCCGGACAACGCCGGGTTCCGGTGCCCAGTAACAACGCCTGGGGCTTGAAGAAATAG
Protein Sequence: MAEYWQQLTNGGGGAGQGNESPALAAACNGGHEAPGVGGHNSAHGNNNYVNFNQFIMQHNLGGGASPNAGGTMQHPLGSSGSNSNSNYSVGGGGGAFGLNPPAAATNSNNFANFYSQPIFPSYQNGDGIASAAFTNSYESGHPSSSSNFSSLYTPFGMNPFDFSASKLQASAPEFVPSLAKLSLDETPAATTNGNSTASQETAINEPRPRTLQAEGAAERGGNNHRSNHNYERERDRDSRPGSTRQQRRSDYRDEREDRREREDRYERNDRRRPQKQQRYDNHRSNKRRDDWNRNRDRINGFPRAVDDLDTSNESAQPSPEKQSQQQQISPRRAPPPPAPDNEKLSQREKLIRDIEQRRLECLVCVESIKAHQPTWSCQNCYHLLHLKCTITWASSSKSDVGWRCPACQNVLQDLPREYLCFCGKLKNPPVSRTELAHSCGEVCCRIEGCSHACTLLCHPGPCPPCQANVVRSCGCGRSSKTMQCAMKEELLCGEICDKPLNCGEHRCRAECHSGKCAACPEQVEQHCHCGKQERQVQCTRESQDKRSYSCKESCGKPLPCGNHKCKDSCHAGSCRPCKLSPEQITSCPCGKMPIPAAQRSSCLDPIPTCEGICSRTLRCGKPAHPHQCGSKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSSRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPICKRPCSRSHPCEHPPQHNCHSAATCPPCMMFTTKFCHGNHEQRKTIPCSQPNFSCGLACGKPLPCGRHKCIKPCHEGACQSAGEICRQSCTKPRSNCGHKCAAACHEGACPETPCKELVEVQCECGHRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPAKANKSNRTLDCNDECRLLERNRRLAVALSSGNPDTKQKTLTKYSEFVRGFAKRNPALTKSVYETLTDLVKLAKESKQRSRSHSFPTMNREKRQLVHELCEIFGIESVSYDKEPNRNVVATAHKERCWFPATSIMEVLARESGQRRVPVPSNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00539339;
90% Identity: iTF_00505792;
80% Identity: -