Basic Information

Insect: Drosophila auraria
Gene Symbol: stc
Assembly: GCA_008042615.1
Location: VNJW01001941.1:3268-6904[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 2.1e+04 -4.1 1.6 15 19 403 407 402 407 0.81

2 14 0.048 5.1e+02 1.1 2.2 4 11 436 443 435 444 0.91

3 14 5.9e-07 0.0063 16.7 15.1 1 19 448 465 448 465 0.93

4 14 2.7e-05 0.29 11.4 9.0 1 18 501 518 501 519 0.95

5 14 2 2.1e+04 -6.3 3.9 7 13 523 529 523 530 0.74

6 14 3.5e-09 3.7e-05 23.9 13.6 1 19 559 577 559 577 0.98

7 14 0.00011 1.1 9.5 16.7 4 19 625 640 618 640 0.88

8 14 0.06 6.3e+02 0.8 11.6 1 11 680 690 680 702 0.79

9 14 4.8e-10 5.1e-06 26.6 15.5 1 18 707 724 707 725 0.97

10 14 1.7 1.8e+04 -3.9 0.9 6 10 754 758 754 759 0.81

11 14 2 2.1e+04 -9.1 11.6 10 18 772 781 761 782 0.71

12 14 2 2.1e+04 -4.4 1.5 9 13 788 792 787 793 0.79

13 14 1.2e-08 0.00013 22.2 10.7 1 17 818 834 818 840 0.94

14 14 2.6e-07 0.0027 17.9 12.4 1 19 850 869 850 869 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	2.1e+04	-4.1	1.6	15	19	403	407	402	407	0.81
2	14	0.048	5.1e+02	1.1	2.2	4	11	436	443	435	444	0.91
3	14	5.9e-07	0.0063	16.7	15.1	1	19	448	465	448	465	0.93
4	14	2.7e-05	0.29	11.4	9.0	1	18	501	518	501	519	0.95
5	14	2	2.1e+04	-6.3	3.9	7	13	523	529	523	530	0.74
6	14	3.5e-09	3.7e-05	23.9	13.6	1	19	559	577	559	577	0.98
7	14	0.00011	1.1	9.5	16.7	4	19	625	640	618	640	0.88
8	14	0.06	6.3e+02	0.8	11.6	1	11	680	690	680	702	0.79
9	14	4.8e-10	5.1e-06	26.6	15.5	1	18	707	724	707	725	0.97
10	14	1.7	1.8e+04	-3.9	0.9	6	10	754	758	754	759	0.81
11	14	2	2.1e+04	-9.1	11.6	10	18	772	781	761	782	0.71
12	14	2	2.1e+04	-4.4	1.5	9	13	788	792	787	793	0.79
13	14	1.2e-08	0.00013	22.2	10.7	1	17	818	834	818	840	0.94
14	14	2.6e-07	0.0027	17.9	12.4	1	19	850	869	850	869	0.96

Sequence Information

Coding Sequence: ATGGACGACTATTGGCAGCAGCTGACCAACGGTGTTGCTCGTGGAGGACCAGCCACCAATGAGTCAGCGGTGATCTACAATGGTCACGAGGCAGCAGCGCAAGCGTCTGGCAACAGCGCCAGTGGTGctaccagcaacagcaacaacaactatgtgAACTTTAATCAGTTCATCCAACAGCACAACCTGGGCGGAGGATCGCCCACTACCAGCACAGGAACAATGCAGCATTCGCTAAGCAGCGGCAATAACACAAACTACAacatcggcggcggcggaggagcctTCGGCCTTAATCCGCCAGTGGCTTCATCAGTGAATTCCAACAGCTTTGGGCATCTTTATTCGCAGCCCATATTCCCAGCGTACCAAAATGGCGATGGCGCCGCCTCCTTCACCAACAGCTATGATGATACCTTTTCGAATCTGTATACACCGTTTGGCAACAATCCGTTTGACTTCAGCTCTTCCAAGCTACAGGCCTCGGCACCCGAATTTGTTCCCAATCTGGCCAAGTTGAGTTTGAACGAAACTCCGGTGGCGACGACGCCAAACGGAAACAGGAACATCACTGCCAGCCAAGAAACTGCCATTAATGTGACGGAAACAAGAACGCCACAACCAGGGGGAAACGGCGGATCAAGAGCAGTTTCCGAACGAGGAGATTCTCACCACCTTCGTTTAACCGCTAACAGTTACGAAAGAGACCGTGGCGACAGGGACTCGCGGCCGGGAAGCACTCGCCAGCAGCGTCGCTCCGACTACCGCGATGACCGCGAGGATCGATACGAGCGAAACGATCGCAAGAAGCCCCAGAAGCAGCAACGCTACGACAATCATCGAAGCAACAAAAGAAGGGATGACTGGAATCGCAACCGGGACCGCATTAACGGTTTTCCAAGGGCCGCCGATGAACTAGACACAAGCAACGAAAGTGCTCAGCCGTCGCCCGAAAAACAGCAAACGACACAGCAGCAAATATCGCCCCGGAGGGCTCTACCGCCTCCACCGGCGGATAATGAGAAACTGTCGCAGCGGGAGAAACTCATACGGGACATCGAGCAGCGGCGCTTGGAGTGTCTGGTGTGCGTGGAAGCGATCAAGGCGCACCAACCGACGTGGTCCTGCCAGAACTGCTACCACGTTCTCCACCTCAAGTGCACTATTACATGGGCGAGCAGCTCGAAATCGGATGTCGGATGGCGGTGCCCAGCCTGTCAGAATGTCCTCCAAGAGCTGCCTCGAGAGTATCTCTGCTTTTGCGGAAAACTCAAGAACCCTCCGGTCTCCCGTACAGAACTGGCGCACAGCTGCGGCGAGGTCTGTTGCCGGATTGAAGGCTGCAGCCACGCTTGCACACTGCTTTGCCACCCAGGCCCTTGTCCACCGTGCCAGGCCAACGTGGTGCGCACCTGTGGATGCGGGCGCAGCTCAAAGACTATGCAGTGCGCCATGAAAGAAGATCTTCTATGCGGCGAGATCTGTGACAAGGTGCTCAACTGTGCCGAGCATCGATGCCGCGCAGAGTGTCACGCGGGCAAGTGCACGGCTTGCGCGGAGCAGGTTGAGCAGCACTGCCATTGCGGCAAGCAAGAACGCCATGTGCAGTGCACCCGCGAAAACCAAGACAAACGAAGCTACTCATGCAAGGAGAGTTGCGGGAAGCCTCTGCCATGCGGCAACCACAAGTGCAAGGACTCGTGTCACGCAGGCAGCTGCAGGCCTTGTAAGCTGAGTCCAGAACAGATAACTAGCTGTCCGTGCGGTAAGATGCCCGTGCCGGCTGCCCAACGTTCGAGCTGCCTAGATCCCATACCAACATGTGAAGGCATCTGCTCGCGGACGCTGCGCTGCGGAAAGCCCGCTCATCCGCACCAATGCGCCAGCAATTGTCACCTGGGCCAGTGCCCTCCGTGTCCCAAGCAAACGGCAGTGAAGTGTCGCTGCGGCCACATGGATCAAATGATCAAGTGCAGGCAGTTGTCCACACGAGCGGACGATGCCCGCTGCAAGCGACGCTGCACGAAGAAGCGCAGCTGTGGCAAGCACAAATGCAATGCCGAGTGCTGTATCGACATAGATCACGCCTGCCCGCTTCCCTGCAACCGGACACTGAGCTGCGGCAAGCACAAGTGTGACCAGCCCTGCCACCGCGGCAACTGTCCACCGTGCTATCGCAGCAGCTTTGAGGAGCTTTACTGCGAGTGCGGAGCTGAAGTGATATATCCGCCAGTGCCGTGCGGCACCAAAAAGCCGCTCTGCAAGCGCCCCTGCTCCCGATCGCATCCCTGCGAGCATCCTCCGCAGCACAACTGCCATTCGGCGGCCACATGTCCGCCCTGCATGATGTTCACCACCAAGTTCTGCCACGGCGGTCACGAGCAGCGAAAGACTATTCCCTGCTCGCAGGCCAACTTTAGCTGTGGCTTGGCGTGCGGAAAGCCCTTACCATGCGGTCGGCATAAGTGCATCAAGCCTTGCCACGAGGGCGCCTGTCAAAGTGCAGGCGAGATATGCCGTCAGAGCTGCACCAAACCGCGAGCAATCTGTGGTCATAAATGTGCTGCCGTCTGTCATGAGGGAATCTGTCCCGAGACTCCGTGCAAGGAGCTGGTTGAGGTCCAGTGCGAATGCGGTCACCGGAAGCAAAGTCGCAGCTGCCAGGAGCTGGCTAGGGAGCACAGTCGCATTGCCACTGCCCAGCTGGCCTCATCAATGGCGGAGATGTCGCGCGGAAATTACATGGAGCTCAGCGAAATCCTGGCCCCGGCTAAGACCAGCAAATCAAACCGCACTCTGGACTGCAATGACGAATGTCGGCTGCTGGAGCGTAATCGTCGACTAGCTTTCGCCTTGTCATCGGGAACCTCAGACACGAAGCCAAAATCGTTGACCAAGTACTCGGAGTTTGTTCGCAGTTTTGCGAAGAGGAATCCGGCTCTGACCAAGAGCGTGTACGAAACACTAAGCGATCTGGTGAAGCTGGCAAAGGAAAGCAAGCAACGCTCGCGGAGCCACTCCTTTCCCACAATGAACCGCGAGAAGAGGCAATTAGTGCACGAACTGTGTGAGATATTTGGTATTGAATCAGTTTCCTACGACAAGGAGCCTAATCGGAATGTTGTTGCCACCGCCCATAAGGAAAGGTGCTGGCTGCCTGCCACGAGTATCATGGAAGTGCTGGCTCGTGAGTCCGGACAACGTCGGGTCCCTGTACCCAGCAACAATGCAtggagcttaaaaaaatag
Protein Sequence: MDDYWQQLTNGVARGGPATNESAVIYNGHEAAAQASGNSASGATSNSNNNYVNFNQFIQQHNLGGGSPTTSTGTMQHSLSSGNNTNYNIGGGGGAFGLNPPVASSVNSNSFGHLYSQPIFPAYQNGDGAASFTNSYDDTFSNLYTPFGNNPFDFSSSKLQASAPEFVPNLAKLSLNETPVATTPNGNRNITASQETAINVTETRTPQPGGNGGSRAVSERGDSHHLRLTANSYERDRGDRDSRPGSTRQQRRSDYRDDREDRYERNDRKKPQKQQRYDNHRSNKRRDDWNRNRDRINGFPRAADELDTSNESAQPSPEKQQTTQQQISPRRALPPPPADNEKLSQREKLIRDIEQRRLECLVCVEAIKAHQPTWSCQNCYHVLHLKCTITWASSSKSDVGWRCPACQNVLQELPREYLCFCGKLKNPPVSRTELAHSCGEVCCRIEGCSHACTLLCHPGPCPPCQANVVRTCGCGRSSKTMQCAMKEDLLCGEICDKVLNCAEHRCRAECHAGKCTACAEQVEQHCHCGKQERHVQCTRENQDKRSYSCKESCGKPLPCGNHKCKDSCHAGSCRPCKLSPEQITSCPCGKMPVPAAQRSSCLDPIPTCEGICSRTLRCGKPAHPHQCASNCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPLCKRPCSRSHPCEHPPQHNCHSAATCPPCMMFTTKFCHGGHEQRKTIPCSQANFSCGLACGKPLPCGRHKCIKPCHEGACQSAGEICRQSCTKPRAICGHKCAAVCHEGICPETPCKELVEVQCECGHRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPAKTSKSNRTLDCNDECRLLERNRRLAFALSSGTSDTKPKSLTKYSEFVRSFAKRNPALTKSVYETLSDLVKLAKESKQRSRSHSFPTMNREKRQLVHELCEIFGIESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWSLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00539339;
90% Identity: iTF_00489062;
80% Identity: -