Basic Information

Insect: Drosophila atripex
Gene Symbol: stc_1
Assembly: GCA_035045925.1
Location: JAWNOP010000070.1:14007671-14011331[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 1.8e+04 -4.2 1.6 15 19 441 445 440 445 0.81

2 14 0.07 6.4e+02 0.5 2.5 4 11 474 481 473 482 0.92

3 14 6.2e-07 0.0056 16.7 15.1 1 19 486 503 486 503 0.93

4 14 1.6e-07 0.0014 18.6 11.4 1 19 539 557 539 557 0.97

5 14 2 1.8e+04 -6.3 3.9 7 13 561 567 561 568 0.74

6 14 3.6e-09 3.3e-05 23.8 13.6 1 19 597 615 597 615 0.98

7 14 0.00015 1.3 9.1 18.0 4 19 663 678 656 678 0.88

8 14 0.075 6.8e+02 0.5 11.9 1 11 718 728 718 740 0.79

9 14 5e-10 4.5e-06 26.6 15.5 1 18 745 762 745 763 0.97

10 14 1.8 1.6e+04 -3.9 0.9 6 10 792 796 792 797 0.81

11 14 2 1.8e+04 -8.8 11.7 10 18 810 819 799 820 0.73

12 14 1.2 1.1e+04 -3.4 1.3 8 13 825 830 824 831 0.80

13 14 8.9e-09 8e-05 22.6 10.1 1 16 856 871 856 878 0.87

14 14 6.9e-07 0.0063 16.5 15.8 1 19 888 907 888 907 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	1.8e+04	-4.2	1.6	15	19	441	445	440	445	0.81
2	14	0.07	6.4e+02	0.5	2.5	4	11	474	481	473	482	0.92
3	14	6.2e-07	0.0056	16.7	15.1	1	19	486	503	486	503	0.93
4	14	1.6e-07	0.0014	18.6	11.4	1	19	539	557	539	557	0.97
5	14	2	1.8e+04	-6.3	3.9	7	13	561	567	561	568	0.74
6	14	3.6e-09	3.3e-05	23.8	13.6	1	19	597	615	597	615	0.98
7	14	0.00015	1.3	9.1	18.0	4	19	663	678	656	678	0.88
8	14	0.075	6.8e+02	0.5	11.9	1	11	718	728	718	740	0.79
9	14	5e-10	4.5e-06	26.6	15.5	1	18	745	762	745	763	0.97
10	14	1.8	1.6e+04	-3.9	0.9	6	10	792	796	792	797	0.81
11	14	2	1.8e+04	-8.8	11.7	10	18	810	819	799	820	0.73
12	14	1.2	1.1e+04	-3.4	1.3	8	13	825	830	824	831	0.80
13	14	8.9e-09	8e-05	22.6	10.1	1	16	856	871	856	878	0.87
14	14	6.9e-07	0.0063	16.5	15.8	1	19	888	907	888	907	0.96

Sequence Information

Coding Sequence: ATGGCGGAGTACTGGCAGCAGCTAACCAATGGAGGAGGTGCTTTCGGAAGGGGTGCAGCCGCCAGTGACTCATCGATGGCATGCAACGGCGCCGGTTCGGAGGCTGTGTCGCAcaacagcggcaacaacaactatgTGAACTTTAACCAGTTCATCATGCAGCACAGACTCGGAGGAGGTGCGCCCAGTGCCGGAAACTCAAACTCCAGCTACATGCAGCATCCCTTGGAAAGCGGGAACAACATGAACTTCGCCATcagcggcggcggaggagccTTTGGCCTGAATCCCCCAATGGGAGCTTCGAATTCGAACAACTTCGAGCATTTTTTTTCGCAGCCCGTTTTTCCACGATATCAAAACGGCGACGGAATCGCCAGTGCCGCCTTCGCCAATAGTTTTGATCTGGGCAACCcgaacagcagcagcggcagcagtcCCTTTTCTAACCTCTACACGCCGTTCGGCAACAATCCGTTCGACTTTAGCGCTTCCAAGCTACAGGCCTCGGCGCCCGAATTTGTGCCTAGTCTGGCCAAGTTGAGTCTAGAGGAGACTCCGGTGGCCACGACAAACGGAAACAGCACTGCCAGCCCCGAAACTGCCATAAAGGAGACGGAGGCGCCAGCTGTAGCGGGAGCAGCTAAATTGGGAGCACCCGGAGGCGTGGgtgcagcaggagcagcagctagGTCAGAGGAGAGAGGAggcaacagcttccgccagaaccAGAACAGCGAGAGGGAGCGGGAGAGGGACCGTGATCGCGACAGGGAtagggatcgggatcgggatcgggatcgggatcggccCAGACAGCAGCGTCGCTCGGATTACCGGGAGGATCGCGAAGATCGCTATCAGAGGAACGAACGGGATCGAGACCGTGACCGTGATCGTGATCGGGACAGGGATCGCGATCGCAAGAAGccgcagaagcagcagcgcTACGACAATCATCGGAGCAACAAGCGCCGCGATGACTGGAACCGTAACAGGGATCGAATCAACGGATATCCTCGGGCCGTGGACGACCTGGACACGAGCAACGAGAGTGCTCAGCCCTCGCCCGAAAAGCagccgcagcaacagcaaatcTCGCCGAGAAGAAACCATCCACCGCCGGCGGACAATGAGAAGCTGTCGCAGAGGGAGAAACTGATTCGTGACATTGAGCAGAGGCGGCTGGAGTGCCTGGTGTGCGTGGAAGCGATCAAGGCGCACCAGCCGACCTGGTCGTGCCAGAACTGCTACCATGTTCTGCACCTCAAGTGCACTACCACCTGGGCCAGCAGCTCCAAGTCGGAGGTGGGCTGGCGCTGTCCGGCGTGCCAGAATGTGCTGCAGGAGCTGCCGCGCGAGTATCTCTGTTTCTGCGGCAAGCTGAAGAACCCGTCGGTGTCGCGTTCGGAACTGCCGCACAGCTGCGGCGAGGTATGCTGCCGGATCGAGGGCTGCAGTCATGCCTGCACACTGCTCTGTCACCCGGGACCGTGTCCGCCGTGCCAGGCCAATGTGGTGCGCAGCTGCGGCTGCGGGCGCAGCACCAAGACGATGCAGTGCGCCATGAAGGAGGACCTGCTGTGCGGCGAGGTCTGTGACAAGCTGCTCAACTGCGGCGAGCACCGGTGCAAGTCGGAGTGCCATGCCGGGAAGTGCGCCGCCTGCTCGGAGCAGGTGGAGCAGCACTGCCACTGCGGCAAGCAGGACCGCCAGGTGACGTGCACGCGCGAGAGCCAGGACAAGCGCAGTTATTCGTGCAAGGAGAGCTGCGGCAAGCCGCTGCCGTGCGGCAATCACAAGTGCAAGGACTCTTGCCACGCAGGAAGCTGCAGACCCTGCAAGCTGAGTCCCGACCAGATTACCAGCTGCCCTTGTGGAAAGATGCCTGTGGCGGCCACCCAACGTTCCAGCTGCCTGGACCCCATCCCCACTTGCGAGGGCATCTGCTCGCGGGTCTTGCGCTGTGGCAAGCCGGCCCATCCACATCAGTGCGGCAGCAAGTGCCACCTGGGTCAGTGTCCACCCTGCCCCAAGCAAACGGCCGTCAAGTGCCGCTGTGGCCACATGGATCAGATGATCAAGTGCCGCCAGTTGTCCACCAGGGCGGACGACGCCCGCTGCAAGCGGCGCTGCACGAAGAAGCGGAGCTGCGGCAAGCACAAGTGCAACGCCGAGTGCTGCATCGACATCGACCACGCCTGTCCGCTGCCCTGCAACCGGACCCTGAGCTGCGGCAAGCACAAGTGCGACCAGCCGTGCCACCGCGGCAACTGTCCGCCCTGCTACCGCAGCAGCTTCGAGGAGCTGTACTGCGAGTGCGGAGCAGAGGTCATCTACCCGCCGGTGCCGTGCGGCACTAAGAAACCGCTCTGCAAGCGCCCGTGCTCGCGATCGCATCCCTGCGAGCATCCGCCGCAACACAATTGCCACTCGGACGCCACTTGTCCGCCCTGCATGCTGTTCACCACCAAGTCCTGCCACGGTGGCCACGAGCAGCGCAAGACCATTCCCTGCTCCCAGGAGAGCTTCAGCTGTGGAATGGCCTGCTCGAAGCCGTTGGCTTGTGGGCGCCACAAGTGCATCAAGCCGTGCCACGAGGGCGCCTGCCAGGCAGCCGGCGACGTTTGCCGTCAGAGCTGCACCAAGCCGCGTCCCACTTGCGGCCACAAGTGCTCAGCACCCTGCCACGAGGGCTCCTGCCCCGAAACGCCCTGCAAGGAGCTAGTGGAGGTACAGTGCGAATGCGGCAACCGGAAGCAGAGTCGCAGCTGCCAGGAGCTGGCCCGCGAGCACAGTCGCATTGCTACGGCCCAGCTGGCCTCGTCCATGGCGGAGATGTCGCGGGGCAACTACATGGAGCTCAGCGAGATCCTGGCTCCCTCCAAGGCCCACAAGTCCAATCGAACTTTGGACTGCAACGATGAGTGCCGACTGCTGGAGCGGAATCGTCGCCTTGCCATGGCGCTATCATCTCGAAATCCAGAGACACAGCAAAAGTCCCTGACCAAGTACTCGGAGTTTGTGAAAGGGTTCGCCAAGAGGAACCCGGTGCTGACCAAGAGCGTATACGAAACGCTGAGCGACCTCGTCAAGCTGGCCAAGGAGAGCAAGCAGCGGTCGCGAAGCCACTCTTTCCCGACCATGAACCGGGAGAAGAGGCAGCTGGTGCACGAGCTATGCGAGATATTCGGCATAGAATCTGTGTCCTACGACAAGGAGCCCAATCGAAACGTGGTAGCCACGGCGCACAAGGAAAGGTGCTGGTTGCCCGCCACGAGTATCATGGAAGTCCTGGCTCGGGAGTCAGGACAAAGACGCGTCCCTGTACCCAGCAACAATGCATGGAGCTTAAAGAAATAG
Protein Sequence: MAEYWQQLTNGGGAFGRGAAASDSSMACNGAGSEAVSHNSGNNNYVNFNQFIMQHRLGGGAPSAGNSNSSYMQHPLESGNNMNFAISGGGGAFGLNPPMGASNSNNFEHFFSQPVFPRYQNGDGIASAAFANSFDLGNPNSSSGSSPFSNLYTPFGNNPFDFSASKLQASAPEFVPSLAKLSLEETPVATTNGNSTASPETAIKETEAPAVAGAAKLGAPGGVGAAGAAARSEERGGNSFRQNQNSERERERDRDRDRDRDRDRDRDRDRPRQQRRSDYREDREDRYQRNERDRDRDRDRDRDRDRDRKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRAVDDLDTSNESAQPSPEKQPQQQQISPRRNHPPPADNEKLSQREKLIRDIEQRRLECLVCVEAIKAHQPTWSCQNCYHVLHLKCTTTWASSSKSEVGWRCPACQNVLQELPREYLCFCGKLKNPSVSRSELPHSCGEVCCRIEGCSHACTLLCHPGPCPPCQANVVRSCGCGRSTKTMQCAMKEDLLCGEVCDKLLNCGEHRCKSECHAGKCAACSEQVEQHCHCGKQDRQVTCTRESQDKRSYSCKESCGKPLPCGNHKCKDSCHAGSCRPCKLSPDQITSCPCGKMPVAATQRSSCLDPIPTCEGICSRVLRCGKPAHPHQCGSKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPLCKRPCSRSHPCEHPPQHNCHSDATCPPCMLFTTKSCHGGHEQRKTIPCSQESFSCGMACSKPLACGRHKCIKPCHEGACQAAGDVCRQSCTKPRPTCGHKCSAPCHEGSCPETPCKELVEVQCECGNRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPSKAHKSNRTLDCNDECRLLERNRRLAMALSSRNPETQQKSLTKYSEFVKGFAKRNPVLTKSVYETLSDLVKLAKESKQRSRSHSFPTMNREKRQLVHELCEIFGIESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWSLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00539339;
90% Identity: iTF_00539339;
80% Identity: -