Basic Information

Insect: Drosophila varians
Gene Symbol: stc
Assembly: GCA_018150405.1
Location: JAECWK010000125.1:1913850-1917404[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 1.5e+04 -4.2 1.6 15 19 426 430 425 430 0.81

2 14 0.069 5.3e+02 0.6 2.5 4 11 459 466 458 467 0.92

3 14 6.1e-07 0.0046 16.7 15.1 1 19 471 488 471 488 0.93

4 14 1.6e-07 0.0012 18.6 11.4 1 19 524 542 524 542 0.97

5 14 2 1.5e+04 -6.3 3.9 7 13 546 552 546 553 0.74

6 14 3.6e-09 2.7e-05 23.8 13.6 1 19 582 600 582 600 0.98

7 14 0.00015 1.1 9.1 18.0 4 19 648 663 641 663 0.88

8 14 0.073 5.6e+02 0.5 11.9 1 11 703 713 703 725 0.79

9 14 4.9e-10 3.8e-06 26.6 15.5 1 18 730 747 730 748 0.97

10 14 1.7 1.3e+04 -3.9 0.9 6 10 777 781 777 782 0.81

11 14 2 1.5e+04 -9.1 11.6 10 18 795 804 784 805 0.71

12 14 1.2 8.8e+03 -3.3 1.3 8 13 810 815 809 816 0.80

13 14 8.7e-09 6.7e-05 22.6 10.1 1 16 841 856 841 863 0.87

14 14 6.8e-07 0.0052 16.6 15.8 1 19 873 892 873 892 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	1.5e+04	-4.2	1.6	15	19	426	430	425	430	0.81
2	14	0.069	5.3e+02	0.6	2.5	4	11	459	466	458	467	0.92
3	14	6.1e-07	0.0046	16.7	15.1	1	19	471	488	471	488	0.93
4	14	1.6e-07	0.0012	18.6	11.4	1	19	524	542	524	542	0.97
5	14	2	1.5e+04	-6.3	3.9	7	13	546	552	546	553	0.74
6	14	3.6e-09	2.7e-05	23.8	13.6	1	19	582	600	582	600	0.98
7	14	0.00015	1.1	9.1	18.0	4	19	648	663	641	663	0.88
8	14	0.073	5.6e+02	0.5	11.9	1	11	703	713	703	725	0.79
9	14	4.9e-10	3.8e-06	26.6	15.5	1	18	730	747	730	748	0.97
10	14	1.7	1.3e+04	-3.9	0.9	6	10	777	781	777	782	0.81
11	14	2	1.5e+04	-9.1	11.6	10	18	795	804	784	805	0.71
12	14	1.2	8.8e+03	-3.3	1.3	8	13	810	815	809	816	0.80
13	14	8.7e-09	6.7e-05	22.6	10.1	1	16	841	856	841	863	0.87
14	14	6.8e-07	0.0052	16.6	15.8	1	19	873	892	873	892	0.96

Sequence Information

Coding Sequence: ATGGCCGACTACTGGCAGCAGCTGACCAACGGAGGAGGCGGTGGCGGAAGGGGAGCAGCCGCCAGTGACTCATCGGTGGGATGTAACGGTGCCGGTCCAGAGGCTGTGCCCCACAGCGCCGGCAATAACAACTATGTGAACTTCAACCAGTTCATTATGCAGCACAACCTTAGAGGTGGTACGTCCAATGCCTCAAACCCCACCACCAGCACCATGCAACATCCTCTGGAACGCGGGAACAACATGAACTTTGCCATTAGCGGTGGCGGAGGAGCCTTTGGTCTCAACCCACCAACGGCAGCGACTAATTCCAATAATTTTGGGCATTTTTATTCACAGCCTATGTTTCCATCGTATCAAAATGGCGACGGAATAGCCAGTACGGCTTTCACGAATAGCTATGGGTTGGGTAACACGAACACCAGCAGCAGTCCCTTTTCAAACCTCTACACACCGTTTGGCAACAATCCGTTTGACTTCAGCTCTTCCAAGCTTCAGGCCTCGGCGCCCGAATTTGTGCCTAACTTGGCCAAGCTGAGTTTAGACGAGACTCCAGCGGCCACGACGAACGGAAACAACACTGCCAGCCCAGAAACTGCCATAAAAGAGACCGTGTTGCCAGCTGGAGCGGGAACATCCAAAGGAGGAGCAGGAGGTGGCGTTGGTGCAGCGGGAGGAGGAGCAAGAACAGAGGAAAGAGGAGCCAACATCTTTCGCCAAAACCACAGTTACGAGAGAGAACGGGAAAGGGATCGCGATCGAGAAAGGGATCGTGATCGGGATAGGGATCGGCCCCGACAGCAGCGACGTTCGGATTACCGGGAGGATCGTGAAGACCGCTATGAGAGGAACGAACGTGATCGGGACCGGGATCGCGATCGCAAGAAGCCGCAAAAGCAGCAGCGCTACGATAATCATCGCAGCAATAAGCGCCGCGATGACTGGAACCGCAACAGGGATAGAATCAACGGATTCCCACGTGCTGACGACTTGGACACAAGCAACGAGAGTGCACAGCCTTCGCCCGAAAAGCAGCCGCAGCAACAGCAAAACTCACCAAGAAGAAATCCGCCGCCACCGGCGGACAATGAAAAGCTATCGCAAAGGGAGAAGCTAATCCGTGACATTGAGCAAAGACGCCTTGAGTGCTTGGTGTGCGTGGAAGCCATCAAAGCGCATCAGCCAACGTGGTCGTGCCAGAACTGTTACCATGTTCTCCACCTCAAATGCACCACCACGTGGGCGAGCAGCTCCAAATCGGAAGTGGGCTGGCGTTGCCCAGCGTGCCAGAATGTGCTGCAAGAGCTGCCACGTGAATACCTATGTTTTTGTGGAAAGCTGAAAAACCCACCTGTTTCGCGGTCCGAATTACCGCACAGTTGCGGAGAGGTCTGTTGCCGAATCGAGGGATGTAGTCATGCCTGTACGCTACTATGTCATCCGGGTCCTTGTCCGCCGTGCCAGGCCAATGTGGTTCGCAGCTGCGGCTGTGGACGCAGCACCAAGACGATGCAGTGCGCCATGAAAGAGGATCTGCTGTGCGGCGAGATCTGCGACAAACTGCTCAACTGCGGCGAACACCGATGCAAGTCGGAGTGCCACGCTGGCAAGTGCGCAGCTTGTTCGGATCAGGTGGAGCAGCACTGTCATTGCGGCAAGCAAGAGCGCCAGGTGGCGTGTACCCGTGAGAGTCAGGATAAGCGAAACTACTCATGCAAGGAGAGTTGCGGCAAGCCGCTGCCATGCGGCAATCATAAGTGCAAGGACTCTTGCCACGCTGGGAGCTGCAGGCCCTGTAAACTGAGTCCCGATCAGATAACCAGTTGTCCATGTGGAAAGATGCCTGTGCCAGCAACACAGCGCACCAGTTGCCTGGATCCCATCCCAACATGTGAAGGAATCTGCTCGCGGACCCTGCGCTGTGGCAAGCCGGCGCATCCACATCAGTGTGGCAGCAAGTGCCACCTTGGTCAGTGTCCACCGTGTCCCAAGCAAACGGCGGTGAAGTGCCGCTGCGGGCACATGGATCAAATGATCAAGTGCCGTCAATTATCCACAAGAGCGGATGACGCTCGCTGTAAACGGCGCTGCACGAAGAAACGTAGCTGCGGAAAGCACAAGTGCAACGCCGAGTGCTGCATTGACATCGACCACGCTTGTCCGCTGCCTTGCAATCGGACCTTGAGCTGCGGCAAACACAAGTGCGACCAGCCTTGCCATCGCGGCAATTGCCCTCCATGCTACCGCAGCAGTTTTGAGGAGCTCTATTGCGAGTGCGGAGCGGAGGTTATCTACCCGCCGGTGCCGTGCGGCACTAAGAAGCCCCTCTGCAAGCGACCCTGCTCGCGATCGCATCCTTGCGAGCATCCGCCACAACACAATTGCCACTCGGCGGCCACTTGTCCGCCCTGCATGATGTTCACCACCAAGTCATGCCATGGTGGCCACGAGCAGCGCAAAACCATTCCCTGCTCCCAGGACAGCTTCAGTTGTGGAATGGCTTGTGGAAAGCCCTTGGCCTGTGGACGACACAAGTGCATCAAGCCGTGTCACGAGGGTGCTTGCCAGGCAGCCGGCGACGTATGCCGCCAGAGTTGCACCAAACCGCGGGCCACGTGTGGTCACAAGTGTTCAGCACCGTGTCACGAAGGCTCCTGTCCCGAGACCCCTTGCAAGGAGCTAGTGGAGGTACAGTGCGAATGCGGTCATCGGAAACAGAGCCGTAGCTGCCAGGAGCTGGCCCGCGAGCACAGCCGTATCGCAACCGCCCAGCTGGCCTCTTCCATGGCGGAGATGTCACGTGGTAATTACATGGAGCTCAGCGAGATCCTGGCTCCTTCCAAGACCAGCAAGTCCAATCGAACTTTGGATTGCAATGATGAATGCCGACTGCTGGAGCGCAATCGCCGCCTTGCCATGGCTCTGTCGTCTCGAAATCCCGACACACAGCAAAAGTCCCTGACTAAGTACTCGGAGTTTGTGAAAGGTTTCGCCAAGAGGAACCCGGTGCTGACCAAGAGCGTATACGAAACGCTGAGCGACCTGGTAAAGCTGGCCAAGGAGAGCAAACAGCGGTCCCGAAGCCACTCGTTTCCAACCATGAACCGGGAAAAGAGGCAGTTGGTACACGAGCTGTGCGAAATATTCGGCATAGAATCGGTGTCCTACGACAAAGAACCCAATCGCAATGTGGTGGCCACGGCTCACAAGGAAAGGTGCTGGTTGCCCGCCACGAGTATAATGGAGGTCCTGGCTCGGGAGTCTGGACAACGTCGTGTCCCTGTGCCCAGCAACAATGCATGGAGCTTAAAGAAATAG
Protein Sequence: MADYWQQLTNGGGGGGRGAAASDSSVGCNGAGPEAVPHSAGNNNYVNFNQFIMQHNLRGGTSNASNPTTSTMQHPLERGNNMNFAISGGGGAFGLNPPTAATNSNNFGHFYSQPMFPSYQNGDGIASTAFTNSYGLGNTNTSSSPFSNLYTPFGNNPFDFSSSKLQASAPEFVPNLAKLSLDETPAATTNGNNTASPETAIKETVLPAGAGTSKGGAGGGVGAAGGGARTEERGANIFRQNHSYERERERDRDRERDRDRDRDRPRQQRRSDYREDREDRYERNERDRDRDRDRKKPQKQQRYDNHRSNKRRDDWNRNRDRINGFPRADDLDTSNESAQPSPEKQPQQQQNSPRRNPPPPADNEKLSQREKLIRDIEQRRLECLVCVEAIKAHQPTWSCQNCYHVLHLKCTTTWASSSKSEVGWRCPACQNVLQELPREYLCFCGKLKNPPVSRSELPHSCGEVCCRIEGCSHACTLLCHPGPCPPCQANVVRSCGCGRSTKTMQCAMKEDLLCGEICDKLLNCGEHRCKSECHAGKCAACSDQVEQHCHCGKQERQVACTRESQDKRNYSCKESCGKPLPCGNHKCKDSCHAGSCRPCKLSPDQITSCPCGKMPVPATQRTSCLDPIPTCEGICSRTLRCGKPAHPHQCGSKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPLCKRPCSRSHPCEHPPQHNCHSAATCPPCMMFTTKSCHGGHEQRKTIPCSQDSFSCGMACGKPLACGRHKCIKPCHEGACQAAGDVCRQSCTKPRATCGHKCSAPCHEGSCPETPCKELVEVQCECGHRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPSKTSKSNRTLDCNDECRLLERNRRLAMALSSRNPDTQQKSLTKYSEFVKGFAKRNPVLTKSVYETLSDLVKLAKESKQRSRSHSFPTMNREKRQLVHELCEIFGIESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWSLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00539339;
90% Identity: iTF_00539339;
80% Identity: -