Dseg006067.1
Basic Information
- Insect
- Drosophila seguyi
- Gene Symbol
- stc
- Assembly
- GCA_008042675.1
- Location
- VNJU01002988.1:20848-24373[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 2 1.7e+04 -4.1 1.6 15 19 399 403 398 403 0.81 2 14 0.048 4e+02 1.1 2.2 4 11 432 439 431 440 0.91 3 14 5.9e-07 0.005 16.8 15.1 1 19 444 461 444 461 0.93 4 14 6.4e-06 0.053 13.5 8.1 1 18 497 514 497 515 0.96 5 14 2 1.7e+04 -6.3 3.9 7 13 519 525 519 526 0.74 6 14 3.5e-09 2.9e-05 23.9 13.6 1 19 555 573 555 573 0.98 7 14 2.4e-05 0.2 11.6 17.0 4 19 621 636 614 636 0.88 8 14 0.059 5e+02 0.8 11.6 1 11 676 686 676 698 0.79 9 14 2.2e-09 1.8e-05 24.5 14.2 1 18 703 720 703 721 0.97 10 14 1.7 1.4e+04 -3.9 0.9 6 10 750 754 750 755 0.81 11 14 2 1.7e+04 -9.0 11.5 10 18 768 777 757 778 0.71 12 14 2 1.7e+04 -4.4 1.5 9 13 784 788 783 789 0.79 13 14 1.1e-08 9.1e-05 22.3 10.9 1 17 814 830 814 836 0.89 14 14 4.3e-07 0.0036 17.2 14.8 1 19 846 865 846 865 0.96
Sequence Information
- Coding Sequence
- ATGGACGAGTATTGGCAGCAGCTAACTAACGGTGGCGTTTTTGGAGGAGCAGGAACCAACGGCCATGGGCACGAGGCAGCGCCGCAAGCCTTGGGAAACAGCGCTAGCGGAGCTACTaccagcggcaacagcaacaacaactatgTGAACTTTAATCAGTTCATTCAACAGCACAACCTGGGCGGAGGATCATCGCCCACTGCCAGCGCCGGAACAATGCAGCACCCACTGAGCGGCGGCAATAACTCGAACTACAacatcggcggcggcggaggagcctTCGGTCTGAATCCGCCAGCGGCTTCGATCGAGAATTCCAACAGCTTTGGGCATCTATATTCACAGCCCATGTTTTCATCGTACCAAAATGGCGATGGCGCCGCCTCCTTTAGTAACAACTATGATAACACCTTTTCGAATCTGTATACACCGTTCGGCAACAACCCCTTCGACTTCAGCTCTTCCAAGCTGCAGGCCTCAGCCCCCGAATTTGTGCCCAATCTGGCCAAGCTGAGTCTGAACGAGGTGCcagcggcgacggcgacgacgcCAAACGGAAACAGGAACATCACTGCCAGCCAAGAAACTGCCATTAGTGTGACGGAAACCAGGGCGCCCCAACCGGGGAGGAGCAGTGGATCAGGAGGAGGAGATCCTAACCACCTTCGCAACAATTACGAAAGAGATCGCGGTGACCGAGACTCGCGACCGGGAAGTACCAGGCAGCAGCGTCGCTCTGACTACCGCGACGACCGCGAGGACCGATACGAGCGAAACGATCGCAAGAAGCCCCAGAAGCAGCAGCGCTACGACAATCATAGAAGCAACAAACGAAGGGACGATTGGAATCGCAACAGGGACCGCATCAACGGCTTTCCCCGGGCCGCCGATGAGCTGGACACGAGCAACGAGAGTGCTCAGCCGTCGCCCGAAAAGAATCAAACgacgcaacagcagcagcagatttCTCCGCGAAAAACTGTGCCGCCTCCACCGGCGGCGGATAATGAGAAGCTATCGCAGCGGGAGAAACTCATACGCGATATCGAGCAGCGGCGACTGGAGTGCCTTGTGTGCGTGGAGGCCATCAAGGCGCACCAGCCGACGTGGTCCTGCCAGAACTGCTACCACGTTCTCCACCTCAAGTGCACTATTACCTGGGCGAGCAGCTCCAAGTCTGATGTCGGCTGGCGGTGTCCCGCCTGTCAGAATGTCCTCCAAGAGCTGCCGCGAGAGTATCTTTGCTTTTGCGGAAAACTCAAGAACCCGCCGGTGTCCCGTACAGAGCTGGCCCACAGCTGCGGTGAGGTCTGTTGCCGGATAGAGGGCTGCAGCCATGCTTGCACACTTCTATGCCACCCGGGCCCCTGTCCACCGTGCCAGGCCAATGTAGTGCGCAGCTGTGGCTGCGGTCGCAGCTCGAAGACCATGCAGTGCGCCATGAAAGAGGATCTCCTTTGTGGAGAGATCTGTGACAAGATGCTCAACTGTGCCGAGCATCGGTGTCGCGCTGAGTGTCATGCGGGCAAGTGTGCTGTTTGTGCGGAGCAGGTGGAGCAGCACTGTCACTGCGGCAAGCAGGAGCGCCAGGTGCAGTGCACGCGCGAGAACCAGGACAAGCGGAGCTACTCGTGCAAGGAGAGTTGCGGGAAGCCCCTGCCCTGCGGTAACCACAAGTGCAAAGACTCCTGCCACGCAGGCAGCTGTAGGCCTTGTAAGTTAAGTCCCGAGCAGATAACCAGCTGTCCTTGCGGTAAGATGCCGGTGCCGGCTGCCCAACGGTCGAGCTGCCTAGATCCCATACCAACTTGCGAGGGAATCTGTTCGAGGACGCTGCGCTGCGGCAAGCCAGCTCATCCCCATCAATGCGCCAGCAAGTGTCACCTTGGCCAGTGCCCGCCGTGCCCAAAGCAAACGGCTGTCAAGTGTCGCTGCGGCCACATGGATCAGATGATCAAGTGCCGGCAGTTGTCCACTAGGGCAGACGATGCCCGCTGCAAGCGACGCTGCACGAAGAAGCGCAGCTGCGGCAAACACAAGTGCAATGCGGAGTGCTGCATCGACATTGATCATGCCTGCCCGCTGCCCTGCAATCGGACTCTGAGCTGCGGCAAGCACAAGTGCGATCAGCCCTGCCACAGGGGCAACTGTTCGCCGTGCTATCGCAGCAGCTTCGAGGAGCTCTACTGCGAGTGCGGTGCCGAAGTTATATATCCGCCGGTACCGTGCGGCACGAAGAAGCCGCTCTGTAAGCGACCCTGCTCGCGATCGCATCCCTGTGAGCATCCGCCGCAGCACAACTGCCACTCGGCGGCTACCTGTCCGCCTTGCATGATATTCACCACCAAGTTCTGCCACGGCGGTCACGAGCAGCGAAAGACTATTCCCTGCTCGCAGGCCAACTTCAGTTGTGGCCTGGCGTGCGGCAAACCCTTACCGTGTGGTCGTCATAAGTGCATCAAGCCTTGTCACGAGGGCGCTTGTCAGAGTGCCGGCGAGGTGTGCCGTCAGAGCTGCACTAAGCCGCGGACACTCTGCGGCCATAAGTGTGCCGCTCCCTGTCATGAAGGCGCCTGTCCCGAGACGCCGTGCAAGGAGCTTGTAGAGGTTCAGTGTGAGTGCGGTAACCGAAAGCAGAGTCGCAGCTGCCAGGAGCTGGCCAGGGAGCACAGTCGGATTGCCACCGCCCAGCTGGCCTCCTCCATGGCGGAGATGTCGCGCGGCAACTACATGGAGCTGAGCGAAATTCTGGCCCCGGCCAAGACCAGCAAATCAAACCGAACTTTGGATTGCAACGACGAGTGTCGTCTGCTGGAACGTAATCGCCGCCTGGCCTCTGCTCTGTCATCGGGCAATTCGGACACGAAGCAGAAGTCGCTGACCAAATACTCCGAATTTGTCCGCGGCTTTGCCAAGAGGAATCCGGCTTTGACCAAGAGCGTGTACGAGACGCTGAGTGATCTGGTGAAGCTGGCCAAGGAGAGCAAGCAACGGTCGCGGAGCCACTCCTTCCCCACGATGAACCGCGAGAAGAGGCAATTGGTGCACGAGCTATGCGAGATATTTGGCATTGAATCGGTCTCATACGACAAGGAGCCCAATAGAAATGTTGTGGCCACGGCCCACAAGGAGAGGTGCTGGTTGCCTGCCACGAGCATTATGGAGGTGCTGGCTCGTGAGTCTGGACAACGTCGAGTCCCTGTGCCCAGCAACAATGCATGGAGCTTAAAGAAATAG
- Protein Sequence
- MDEYWQQLTNGGVFGGAGTNGHGHEAAPQALGNSASGATTSGNSNNNYVNFNQFIQQHNLGGGSSPTASAGTMQHPLSGGNNSNYNIGGGGGAFGLNPPAASIENSNSFGHLYSQPMFSSYQNGDGAASFSNNYDNTFSNLYTPFGNNPFDFSSSKLQASAPEFVPNLAKLSLNEVPAATATTPNGNRNITASQETAISVTETRAPQPGRSSGSGGGDPNHLRNNYERDRGDRDSRPGSTRQQRRSDYRDDREDRYERNDRKKPQKQQRYDNHRSNKRRDDWNRNRDRINGFPRAADELDTSNESAQPSPEKNQTTQQQQQISPRKTVPPPPAADNEKLSQREKLIRDIEQRRLECLVCVEAIKAHQPTWSCQNCYHVLHLKCTITWASSSKSDVGWRCPACQNVLQELPREYLCFCGKLKNPPVSRTELAHSCGEVCCRIEGCSHACTLLCHPGPCPPCQANVVRSCGCGRSSKTMQCAMKEDLLCGEICDKMLNCAEHRCRAECHAGKCAVCAEQVEQHCHCGKQERQVQCTRENQDKRSYSCKESCGKPLPCGNHKCKDSCHAGSCRPCKLSPEQITSCPCGKMPVPAAQRSSCLDPIPTCEGICSRTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCSPCYRSSFEELYCECGAEVIYPPVPCGTKKPLCKRPCSRSHPCEHPPQHNCHSAATCPPCMIFTTKFCHGGHEQRKTIPCSQANFSCGLACGKPLPCGRHKCIKPCHEGACQSAGEVCRQSCTKPRTLCGHKCAAPCHEGACPETPCKELVEVQCECGNRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPAKTSKSNRTLDCNDECRLLERNRRLASALSSGNSDTKQKSLTKYSEFVRGFAKRNPALTKSVYETLSDLVKLAKESKQRSRSHSFPTMNREKRQLVHELCEIFGIESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWSLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00539339;
- 90% Identity
- iTF_00489062;
- 80% Identity
- -