Basic Information

Insect: Drosophila mimetica
Gene Symbol: stc
Assembly: GCA_037075245.1
Location: JBAMCH010000007.1:367196-370995[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 2e+04 -4.1 1.6 15 19 411 415 410 415 0.81

2 14 0.048 4.8e+02 1.1 2.2 4 11 444 451 443 452 0.91

3 14 6e-07 0.006 16.7 15.1 1 19 456 473 456 473 0.93

4 14 3.8e-07 0.0038 17.4 12.2 1 19 509 527 509 527 0.99

5 14 2 2e+04 -6.3 3.9 7 13 531 537 531 538 0.74

6 14 3.5e-09 3.5e-05 23.9 13.6 1 19 567 585 567 585 0.98

7 14 1.1 1.1e+04 -3.3 0.5 5 10 615 620 615 620 0.90

8 14 0.00014 1.4 9.1 18.0 4 19 633 648 626 648 0.88

9 14 0.068 6.7e+02 0.6 11.8 1 11 688 698 688 710 0.79

10 14 4.9e-10 4.8e-06 26.6 15.5 1 18 715 732 715 733 0.97

11 14 1.7 1.7e+04 -3.9 0.9 6 10 762 766 762 767 0.81

12 14 2 2e+04 -9.4 11.9 10 18 780 789 769 790 0.71

13 14 6.2e-09 6.1e-05 23.1 12.0 1 17 826 842 826 848 0.93

14 14 8.6e-07 0.0086 16.2 14.1 1 19 858 877 858 877 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	2e+04	-4.1	1.6	15	19	411	415	410	415	0.81
2	14	0.048	4.8e+02	1.1	2.2	4	11	444	451	443	452	0.91
3	14	6e-07	0.006	16.7	15.1	1	19	456	473	456	473	0.93
4	14	3.8e-07	0.0038	17.4	12.2	1	19	509	527	509	527	0.99
5	14	2	2e+04	-6.3	3.9	7	13	531	537	531	538	0.74
6	14	3.5e-09	3.5e-05	23.9	13.6	1	19	567	585	567	585	0.98
7	14	1.1	1.1e+04	-3.3	0.5	5	10	615	620	615	620	0.90
8	14	0.00014	1.4	9.1	18.0	4	19	633	648	626	648	0.88
9	14	0.068	6.7e+02	0.6	11.8	1	11	688	698	688	710	0.79
10	14	4.9e-10	4.8e-06	26.6	15.5	1	18	715	732	715	733	0.97
11	14	1.7	1.7e+04	-3.9	0.9	6	10	762	766	762	767	0.81
12	14	2	2e+04	-9.4	11.9	10	18	780	789	769	790	0.71
13	14	6.2e-09	6.1e-05	23.1	12.0	1	17	826	842	826	848	0.93
14	14	8.6e-07	0.0086	16.2	14.1	1	19	858	877	858	877	0.96

Sequence Information

Coding Sequence: ATGGCTGAGTACTGGCAACAGTTGACCAAcggtggaggagcaggagtcGCCGGGTCAGGCAATGAGTCACCGGCCTGCAATGGAGGCCAAGAGGGACACGCAGTGGGTCGCAGCCATAGCGcccacggcaacaacaactatgtGAACTTCAATCAGTTCATTATGCAGCACAATctgggaggcggaggaggagcgtCCACCAACACAGCAAGCACCATTCAACATCCATtgggcagcagcagtagcaatAGCAACCCTACTAACTACTccctcggcggcggcggaggagcttTTGGACTGAACCCCCCAGCTCCAGCAGCGATCCACTCCAACAATTTTGCAAATTTTTACTCGCAGCCCATATTCCCATCGCATCAAAATGGTGATAGCATAGCTAGCGCCGCCTTCACCAATAGTTATGGATCAGGATCGGGCAatccgagcagcagcagccactttTCGAGTCTTTACACACCGTTTGGCAACAATCCGTTTGACTTTAGCGCTTCCAAGCTGCAGGCCTCGGCTCccgaatttgttcccaatctGGCCAAACTGAGTCTAGATGAGACTTCATCGGCAGCCACATCGAATGGGAACAGCACTGCCAGCCAACAAGAGACTGCCATGAATGAAACGAGACCTAGGAATATGCAATCGGAGGGAGCAACTGAAAAAGGAGGCAACCACCACCGCTCAAATCACAACTACGAAAGGGAGCGGGACAGGGACGCGAGGCCCGGAAGTACGCGTCAGCAGCGCCGTTCAGACTATCGCGACGAGCGGGAGGACCGAAGGGAAAGAGAGGATCGCTATGAACGAAACGATCGCAGAAGGCCGCAGAAGCAGCAACGCTACGACAATCATCGCAGCAACAAGCGGAGGGATGACTGGAATCGAAACAGGGATCGCATCAATGGTTTCCCGCGGGCCGTTGACGATTTGGACACGAGCAACGAGAGTGCGCAACCATCGCCCGAAAAACAatcgcagcaacagcagcagataTCTCCCAGGAGAGCTCCTCCCCCACCAGCGGATAATGAGAAGCTATCGCAGCGGGAGAAACTTATTCGCGACATCGAACAGAGGCGACTAGAGTGCCTGGTATGCGTAGAGGCGATTAAGGCGCATCAACCGACCTGGTCGTGCCAGAATTGTTACCACTTGCTCCACCTCAAGTGCACCATTACTTGGGCGAGCAGCTCCAAGTCCGATGTGGGCTGGCGCTGTCCCGCATGCCAGAATGTGCTGCAGGAGCTGCCGCGTGAGTATCTTTGTTTCTGCGGAAAGCTAAAGAACCCGCCGGTGTCGCGCACGGAGTTGGCCCATAGTTGCGGGGAGGTCTGCTGCAGAATAGAGGGATGTAGCCATGCATGCACTTTGCTCTGTCACCCAGGACCATGTCCTCCATGCCAGGCGAACGTCGTGCGTAGCTGCGGCTGTGGACGCAGCTCCAAGACAATGCAGTGCGCCATGAAGGAAGAGCTTTTGTGCGGTGAGATATGCGACAGATCGCTCAACTGTGGCGAACATCGCTGCCGAGCAGAGTGCCACTCGGGCAAGTGCGCGGCCTGTCCGGAGCAGGTGGAACAGCACTGCCACTGCGGCAAGCAGGATCGCCAGGTGCAGTGCACGCGCGAGAACCAGGATAAACGCAGCTATTCCTGCAAGGAGAGCTGCGGCAAACCGCTTCCCTGCGGCAACCACAAATGCAAGGACTCCTGCCACGCGGGCAGCTGCAGACCCTGCAAGCTCAGTCCCGAGCAGATAACCAGTTGTCCTTGCGGCAAGATGCCTGTTCCGGCTGCTCAGCGTTTAAGCTGCCTGGATCCCATACCCACTTGCGAGGGCGTCTGCTCCAGGACGCTGCGCTGCGGAAAGCCGGCACATCCGCACCAGTGCGGCAGCAAGTGCCATTTAGGCCAGTGCCCGCCCTGTCCCAAACAAACGGCGGTAAAGTGTCGTTGCGGCCACATGGACCAGATGATCAAATGCCGTCAACTGTCCAGCCGGGCGGACGATGCGCGCTGCAAGCGTCGCTGTACCAAGAAGCGCAGCTGTGGCAAACACAAGTGCAATGCCGAGTGCTGCATCGACATCGATCACGCGTGCCCGCTGCCCTGTAACCGAACCCTGAGCTGCGGCAAACACAAGTGCGACCAGCCGTGCCACCGCGGCAACTGTCCGCCGTGCTATCGCAGCAGCTTCGAGGAGCTCTACTGCGAATGTGGCGCTGAAGTGATCTATCCGCCTGTGCCGTGCGGCACCAAGAAGCCAATCTGTAAGCGCCCCTGCTCCCGCTCACATCCCTGCGAACATCCGCCGCAACACAACTGCCATTCGGCGTCCACTTGTCCGCCCTGCATGATGTTCACCACGAAGTTCTGTCACGGCAACCACGAGCAGCGTAAGACCATTCCCTGCTCGCAGCCCAACTTCAGTTGTGGCCTGGCTTGTGGAAAGCCATTGCCCTGCGGACGCCACAAGTGCATCAAGCCATGCCACGAAGGCCCGTGTCAGACAGCTGGCGAGATCTGTCGCCAGAGCTGCACTAAGCCGCGATCAAACTGTGGCCACAAGTGTGCGTCCGCCTGTCACGAGGGATCGTGTCCGGAGACGCCTTGCAAGGAACTGGTTGAGGTTCAGTGCGAGTGCGGTCATCGAAAGCAGAGCCGCAGCTGCCAGGAGCTGGCCAGGGAGCACAGTCGCATAGCCACCGCTCAGCTGGCGTCGTCCATGGCGGAAATGTCGCGCGGCAATTACATGGAGCTTAGCGAAATCTTGGCCCCAGCCAAGGCCAACAAATCTAATAGAACTTTGGACTGCAATGATGAATGTCGTTTGCTGGAAAGGAATCGTCGTCTGGCTGTGGCTCTGTCCTCGGGAAATCCAGATACAAAGCAGAAATCCCTAACCAAGTACTCGGAGTTTGTGCGTGGCTTTGCAAAGAGGAACCCGGCGCTGACCAAGAGCGTTTACGAGACGCTGACTGATCTGGTAAAGTTGGCCAAGGAGAGCAAGCAGCGGTCGAGGAGCCACTCCTTCCCCACGATGAACCGCGAGAAGAGGCAGTTAGTGCACGAATTGTGCGAGATATTTGGCATAGAGTCGGTCTCCTATGACAAGGAGCCCAACCGCAATGTCGTAGCGACGGCGCATAAAGAAAGGTGCTGGTTTCCTGCCACGAGCATCATGGAGGTGCTGGCACGCGAGTCCGGACAACGCCGTGTCCCGGTGCCAAGTAACAATGCATGGGGCTTAAAGAAATAG
Protein Sequence: MAEYWQQLTNGGGAGVAGSGNESPACNGGQEGHAVGRSHSAHGNNNYVNFNQFIMQHNLGGGGGASTNTASTIQHPLGSSSSNSNPTNYSLGGGGGAFGLNPPAPAAIHSNNFANFYSQPIFPSHQNGDSIASAAFTNSYGSGSGNPSSSSHFSSLYTPFGNNPFDFSASKLQASAPEFVPNLAKLSLDETSSAATSNGNSTASQQETAMNETRPRNMQSEGATEKGGNHHRSNHNYERERDRDARPGSTRQQRRSDYRDEREDRREREDRYERNDRRRPQKQQRYDNHRSNKRRDDWNRNRDRINGFPRAVDDLDTSNESAQPSPEKQSQQQQQISPRRAPPPPADNEKLSQREKLIRDIEQRRLECLVCVEAIKAHQPTWSCQNCYHLLHLKCTITWASSSKSDVGWRCPACQNVLQELPREYLCFCGKLKNPPVSRTELAHSCGEVCCRIEGCSHACTLLCHPGPCPPCQANVVRSCGCGRSSKTMQCAMKEELLCGEICDRSLNCGEHRCRAECHSGKCAACPEQVEQHCHCGKQDRQVQCTRENQDKRSYSCKESCGKPLPCGNHKCKDSCHAGSCRPCKLSPEQITSCPCGKMPVPAAQRLSCLDPIPTCEGVCSRTLRCGKPAHPHQCGSKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSSRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPICKRPCSRSHPCEHPPQHNCHSASTCPPCMMFTTKFCHGNHEQRKTIPCSQPNFSCGLACGKPLPCGRHKCIKPCHEGPCQTAGEICRQSCTKPRSNCGHKCASACHEGSCPETPCKELVEVQCECGHRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPAKANKSNRTLDCNDECRLLERNRRLAVALSSGNPDTKQKSLTKYSEFVRGFAKRNPALTKSVYETLTDLVKLAKESKQRSRSHSFPTMNREKRQLVHELCEIFGIESVSYDKEPNRNVVATAHKERCWFPATSIMEVLARESGQRRVPVPSNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00539339;
90% Identity: iTF_00505792;
80% Identity: -