Dbun006364.1
Basic Information
- Insect
- Drosophila bunnanda
- Gene Symbol
- stc
- Assembly
- GCA_008042815.1
- Location
- VNKE01006001.1:156602-160108[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 2 1.7e+04 -4.1 1.6 15 19 397 401 396 401 0.81 2 14 0.048 3.9e+02 1.1 2.2 4 11 430 437 429 438 0.91 3 14 5.9e-07 0.0049 16.8 15.1 1 19 442 459 442 459 0.93 4 14 2.7e-05 0.23 11.4 9.0 1 18 495 512 495 513 0.95 5 14 2 1.7e+04 -6.3 3.9 7 13 517 523 517 524 0.74 6 14 1.9e-09 1.6e-05 24.7 13.7 1 19 553 571 553 571 0.98 7 14 2.4e-05 0.2 11.6 17.0 4 19 619 634 612 634 0.88 8 14 0.063 5.2e+02 0.7 11.7 1 11 674 684 674 696 0.79 9 14 4.8e-10 4e-06 26.6 15.5 1 18 701 718 701 719 0.97 10 14 1.7 1.4e+04 -3.9 0.9 6 10 748 752 748 753 0.81 11 14 2 1.7e+04 -9.0 11.5 10 18 766 775 755 776 0.71 12 14 2 1.7e+04 -4.4 1.5 9 13 782 786 781 787 0.79 13 14 1.4e-08 0.00012 21.9 9.2 1 17 812 828 812 834 0.89 14 14 5.2e-07 0.0043 16.9 13.1 1 19 844 863 844 863 0.96
Sequence Information
- Coding Sequence
- ATGGACGAGTATTGGCAGCAGCTGACCAACGGTGGCGTTCGTGGAGGAGCAGCCACCAACGGCCATGGTCTCGAGGCAGCGGCGCAAGCATCTGGCAATAGCGTCAGCGGAGCTActaccagcagcaacagcaacaacaactacgtGAATTTCAATCAGTTCATTCAACAGCACAACCTAGGTGGAGGATCATCGCCCACTGCCAGCGCCGGAACTATGCAGCATCCCCTGAGCAATAACACGAATTACAacatcggcggcggcggaggtgcCTTCGGCCTGAATCCGCCAGGTGCTCCGCTAGGGAATTCCACGGGCTTTGGGCATCTATATTCGCAGCCCATGTTTCAATCGTATCAGAATGGCGATGGCGCCTCCTCCTTTAGCAACAACTATGATGAAACCTTTTCAAATCTGTACACACCGTTCGGCAACAATCCCTTTGACTTCAGCTCTTCCAAGCTGCAGGCCTCAGCCCCCGAATTTGTGCCCAACCTGGCCAAGCTGACTCTCAACGAGGTGCCGGTGGAGGTGGCGACAACGCCAAACGGGAACAGGAACATCACTGCCAGCCAAGAAACTGCCATTAGTGTGACGGGAACAAGGCCACCACAACCGGGTGgatcaggaggaggagatccCCACCACCATCGCTTATCGGCCAACAATTACGAAAGAGATCGCGGCGACAGAGACTCGCGACCGGGAAGCACCCGGCAGCAGCGCCGCTCTGATTACCGAGACGACCGAGAAGATCGATATGAGCGAAACGATCGCAAGAAGCcccagaagcagcagcgcTACGACAATCATAGAAGCAACAAACGAAGGGACGACTGGAATCGCAACAGGGACCGCATCAATGGCTTTCCCCGGGCCGCCGACGAGCTGGACACTAGCAACGAGAGTGCTCAGCCTTCGCCTGAAAAGCAGCAAacgacgcagcagcagcagcaaatctCTCCGCGGAGAGGTCTGCCGCCTCCACCGGCGGCGGACAATGAGAAGCTATCGCAGCGAGAGAAACTCATACGCGATATTGAGCAACGGCGGCTGGAGTGCCTGGTGTGCGTGGAGGCAATAAAGGCGCACCAGCCGACGTGGTCCTGCCAGAACTGCTATCACGTTCTCCACCTCAAGTGCACTATTACCTGGGCGAGCAGCTCCAAGTCTGATGTCGGCTGGCGGTGTCCCGCCTGCCAGAATGTCCTCCAAGAGCTGCCGCGCGAGTATCTCTGCTTTTGCGGAAAACTCAAGAACCCGCCGGTGTCCCGTACGGAACTGGCGCACAGTTGCGGTGAGGTCTGTTGCCGGATCGAGGGCTGCAGCCATGCTTGCACACTTCTGTGCCACCCGGGCCCCTGTCCACCGTGCCAGGCCAATGTGGTGCGCAGCTGTGGTTGTGGGCGCAGTTCTAAGACCATGCAGTGCGCCATGAAGGAAGATCTCCTCTGCGGCGAGATCTGCGACAAGGTGCTCAACTGTGCCGAGCATCGGTGTCGCGCCGAATGTCATGCGGGCAAGTGTACAGCTTGTGcggagcaggtggagcagcACTGTCATTGCGGCAAGCAGGAGCGTCAGGTGCAGTGCACGCGCGAGAACCAGGACAAGCGGAGCTACTCATGCAAGGAGAGTTGCGGCAAGCCCCTTCCCTGCGGTAATCACAAGTGCAAGGACTCGTGCCACGCGGGCAACTGTAGGCCTTGTAAGCTAAGTCCCGAGCAGATAACAAGCTGTCCTTGCGGTAAGATGCCGGTGCCGGCTGCCCAACGCTCGAGCTGCCTGGATCCCATACCAACTTGCGAAGGAATCTGCTCGAGGACGTTGCGCTGCGGGAAACCAGCTCATCCCCATCAATGCGCCAGCAAGTGTCATCTGGGTCAGTGTCCGCCGTGTCCCAAGCAAACTGCCGTCAAGTGTCGCTGCGGGCACATGGATCAGATGATCAAGTGCCGGCAGCTATCCACGCGAGCGGACGATGCCCGCTGCAAGCGACGCTGCACGAAAAAGCGCAGTTGCGGCAAGCACAAGTGCAATGCTGAGTGCTGCATCGACATAGATCACGCCTGCCCGCTGCCCTGCAATCGGACGCTGGGCTGTGGCAAGCACAAATGCGATCAGCCCTGCCATCGAGGCAACTGTCCGCCGTGCTATCGCAGCAGCTTCGAGGAGCTTTACTGCGAGTGCGGGGCCGAAGTGATATATCCGCCGGTACCGTGCGGCACTAAGAAGCCGCTCTGCAAGCGACCCTGCTCGCGATCACATCCTTGCGAGCATCCGCCGCAGCACAACTGCCACTCGGCGGCCACCTGTCCGCCCTGCATGATGTTTACCACCAAGTTCTGCCACGGCGGTCACGAGCAGCGCAAGACTATTCCCTGCTCGCAGGCCAACTTTAGCTGTGGTCTCGCGTGCGGCAAGCCCTTGCCCTGCGGTCGTCATAAGTGCATCAAGCCGTGTCACGAAGGCATCTGTCAGAGTGCCGCCGAAGTATGCCGTCAGAGCTGCACCAAGCCGCGGACGCTCTGCGGTCATAAGTGTGCTGCTGCCTGTCATGAGGGCGCCTGTCCGGAGACGCCGTGCAAGGAGCTGGTGGAGGTTCAGTGTGAATGCGGCCACCGGAAGCAGAGTCGCAGCTGCCAGGAGCTGGCCAGGGAGCATAGTCGGATTGCCACCGCCCAGCTGGCCTCATCTATGGCCGAGATGTCGCGCGGCAACTACATGGAGCTGAGCGAAATCCTGGCCCCAGCCAAGACCAGCAAATCGAACCGAACtttgGACTGTAACGACGAGTGTCGTCTGCTGGAGCGGAATCGTCGGTTAGCATCTGCCCTCTCATCGGGCAACCCGGACACGAAGCAAAAGTCGCTGACCAAGTACTCGGAGTTTGTTCGCGGCTTTGCCAAGAGGAATCCGGCTCTGACCAAGAGCGTGTACGAGACGCTGACCGATCTGGTgaagctggccaaggagaGCAAGCAGCGATCGCGGAGTCACTCCTTCCCCACGATGAACCGCGAGAAGAGGCAATTGGTGCACGAGCTGTGCGAGATATTTGGCATTGAATCGGTCTCCTACGACAAGGAGCCCAATCGGAATGTTGTGGCCACGGCCCACAAGGAGAGGTGCTGGCTGCCTGCCACAAGCATCATGGAGGTGCTGGCTCGTGAGTCTGGACAACGCCGAGTCCCTGTGCCCAGCAACAATGCATGGAGCTTGAAGAAATAG
- Protein Sequence
- MDEYWQQLTNGGVRGGAATNGHGLEAAAQASGNSVSGATTSSNSNNNYVNFNQFIQQHNLGGGSSPTASAGTMQHPLSNNTNYNIGGGGGAFGLNPPGAPLGNSTGFGHLYSQPMFQSYQNGDGASSFSNNYDETFSNLYTPFGNNPFDFSSSKLQASAPEFVPNLAKLTLNEVPVEVATTPNGNRNITASQETAISVTGTRPPQPGGSGGGDPHHHRLSANNYERDRGDRDSRPGSTRQQRRSDYRDDREDRYERNDRKKPQKQQRYDNHRSNKRRDDWNRNRDRINGFPRAADELDTSNESAQPSPEKQQTTQQQQQISPRRGLPPPPAADNEKLSQREKLIRDIEQRRLECLVCVEAIKAHQPTWSCQNCYHVLHLKCTITWASSSKSDVGWRCPACQNVLQELPREYLCFCGKLKNPPVSRTELAHSCGEVCCRIEGCSHACTLLCHPGPCPPCQANVVRSCGCGRSSKTMQCAMKEDLLCGEICDKVLNCAEHRCRAECHAGKCTACAEQVEQHCHCGKQERQVQCTRENQDKRSYSCKESCGKPLPCGNHKCKDSCHAGNCRPCKLSPEQITSCPCGKMPVPAAQRSSCLDPIPTCEGICSRTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLGCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPLCKRPCSRSHPCEHPPQHNCHSAATCPPCMMFTTKFCHGGHEQRKTIPCSQANFSCGLACGKPLPCGRHKCIKPCHEGICQSAAEVCRQSCTKPRTLCGHKCAAACHEGACPETPCKELVEVQCECGHRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPAKTSKSNRTLDCNDECRLLERNRRLASALSSGNPDTKQKSLTKYSEFVRGFAKRNPALTKSVYETLTDLVKLAKESKQRSRSHSFPTMNREKRQLVHELCEIFGIESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWSLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00539339;
- 90% Identity
- iTF_00489062;
- 80% Identity
- -