Djam010308.1
Basic Information
- Insect
- Drosophila jambulina
- Gene Symbol
- stc
- Assembly
- GCA_018152175.1
- Location
- JAECXH010000114.1:21942499-21946038[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 2 1.7e+04 -4.1 1.6 15 19 402 406 401 406 0.81 2 14 0.048 4e+02 1.1 2.2 4 11 435 442 434 443 0.91 3 14 5.9e-07 0.0049 16.7 15.1 1 19 447 464 447 464 0.93 4 14 1.1e-05 0.089 12.7 8.2 1 18 500 517 500 518 0.95 5 14 2 1.7e+04 -6.3 3.9 7 13 522 528 522 529 0.74 6 14 3.5e-09 2.9e-05 23.9 13.6 1 19 558 576 558 576 0.98 7 14 2.4e-05 0.2 11.6 17.0 4 19 624 639 617 639 0.88 8 14 0.06 5e+02 0.8 11.6 1 11 679 689 679 701 0.79 9 14 4.8e-10 4e-06 26.6 15.5 1 18 706 723 706 724 0.97 10 14 1.7 1.4e+04 -3.9 0.9 6 10 753 757 753 758 0.81 11 14 2 1.7e+04 -9.0 11.6 10 18 771 780 760 781 0.71 12 14 2 1.7e+04 -4.4 1.5 9 13 787 791 786 792 0.79 13 14 1.1e-08 9.1e-05 22.3 10.9 1 17 817 833 817 839 0.89 14 14 9.2e-08 0.00076 19.3 13.0 1 19 849 868 849 868 0.96
Sequence Information
- Coding Sequence
- ATGGACGAGTATTGGCAGCAGCTGACCAATTTTGGCGTTCGTGGAGGAGCAGCCACCAATGGCCATGGTCACGAGGCAGCGGCGCAGGCTTCGGGAAACAGCGCCAGCGGAGCTACTACCAGCGGCAACAGCAACAACAACTATGTGAACTTCAATCAGTTCATTCAACAGCACAACCTGGGCGGAGGGTCGTCGCCTACTGCCAGCGCCGGAACAATGCAGCACCCACTGAGCAGCGGCAATAACACGAACTACAACATCGGCGGCGGAGGAGGAGCCTTCGGCCTAAATCCGCCAGTGGCTTCGATAGGAAATTCCAGCAGCTTTGGGCATCTATATTCACAGCCCATGTTTCCATCGTACCAAAATGGCGATGGCACCGCCTCCTTTAGTAACAACTATGATGATACCTTTTCGAATCTGTATACACCGTTCGGCAATAACCCCTTTGACTTCAGCTCTTCCAAGCTGCAGGCCTCAGCCCCCGAATTTGTGCCCAATTTGGCCAAGCTGAGTCTAAACGAGGTGCCGGCCGCGGCAGCGACGACGCCAAACGGGAACAGGAACATCACTGCCAGCCAAGAAACTGCCATTAATGTGACGGGAACAAGGGCAACACAACCGGGGGGAAGCGGTGGTTCAGGAGGCGGAGAGCCCCACCACCTGCGCTTATCCGCCAACAATTACGAAAGAGACCGCGGTGACAGAGACTCGCGACCGGGAAGTACCAGGCAGCAGCGTCGCTCTGACTACCGCGACGACCGCGAGGATCGATACGAGCGAAACGATCGCAAGAAACCCCAGAAGCAGCAACGCTACGACAATCATAGGAGCAACAAACGAAGGGACGACTGGAATCGCAATAGGGACCGCATCAACGGTTTTCCCCGGGCCGCCGACGAGCTGGACACTAGCAATGAGAGTGCTCAGCCGTCGCCCGAAAAGCAACAATCGACGCAGCAGCAGCAGCAAATCTCCCCACGGAGAGCTGTGCCGCCTCCACCGGCGGCGGATAATGAGAAGCTATCGCAGCGAGAAAAACTTATACGCGATATCGAGCAGCGGCGACTGGAGTGCCTCGTTTGTGTGGAGGCCATCAAGGCGCACCAGCCGACGTGGTCCTGCCAGAACTGCTACCACGTTCTCCACCTCAAGTGCACTATTACCTGGGCGAGCAGCTCCAAGTCTGATGTCGGCTGGCGGTGTCCCGCCTGTCAGAATGTCCTCCAAGAGCTGCCGCGGGAGTATCTCTGCTTTTGTGGAAAACTCAAAAATCCGCCGGTGTCCCGTACAGAGTTGGCCCACAGCTGTGGTGAGGTCTGTTGCCGGATCGAGGGCTGCAGCCATGCTTGCACACTTCTATGCCACCCGGGTCCCTGTCCACCGTGCCAGGCCAATGTGGTGCGCAGCTGTGGCTGCGGACGCAGCTCCAAGACCATGCAGTGCGCCATGAAAGAAGATCTCCTCTGTGGTGAGATCTGTGACAAGGTGCTCAACTGTGCCGAGCATCGGTGTCGCGCTGAGTGTCACGCGGGCAAGTGTGCTGCTTGTGCGGAGCAGGTGGAGCAGCACTGTCACTGCGGCAAGCAGGAGCGCCAGGTGCAGTGCACGCGCGAGAACCAGGATAAGAGGAGCTACTCGTGCAAGGAGAGTTGCGGGAAGCCCCTGCCCTGCGGTAACCACAAGTGCAAAGACTCGTGCCACGCGGGCAGCTGTAGGCCTTGTAAGCTAAGTCCCGAACAGATAACCAGCTGTCCGTGCGGTAAAATGCCGGTGCCGGCTGCACAACGCTCGAGCTGCCTAGATCCCATACCAACTTGCGAGGGAATCTGTTCGAGGACGCTGCGCTGCGGCAAGCCAGCTCATCCTCATCAATGCGCCAGCAAGTGTCATTTGGGCCAGTGCCCGCCGTGTCCCAAACAAACGGCTGTCAAGTGTCGCTGCGGCCACATGGATCAGATGATCAAGTGCCGGCAGTTGTCCACTCGGGCAGACGATGCCCGCTGCAAGCGACGCTGCACGAAGAAGCGCAGCTGCGGCAAGCACAAGTGCAACGCGGAGTGCTGCATTGACATTGATCACGCCTGTCCGTTGCCCTGCAACCGCACGCTAAGCTGCGGCAAGCACAAGTGCGATCAGCCCTGCCACCGAGGCAACTGTCCGCCGTGCTATCGCAGTAGTTTCGAGGAGCTTTATTGCGAGTGCGGGGCCGAAGTGATATATCCGCCGGTACCGTGCGGGACCAAGAAGCCGCTCTGCAAGCGACCCTGCTCGCGATCACATCCCTGCGAGCATCCGCCGCAGCACAACTGCCACTCGGCGGCCACCTGTCCGCCCTGCATGATTTTCACCACCAAATTCTGCCATGGCGGTCACGAGCAGCGAAAGACTATTCCCTGCTCACAGGCCAACTTTAGTTGTGGCCTGGCGTGCGGCAAGCCCTTACCATGTGGCCGTCATAAGTGCATCAAGCCCTGTCACGAAGGCGCCTGTCAGAGTGCCGGCGAGGTGTGCCGTCAGAGCTGCACTAAGCCTCGGACGCTCTGCGGCCATAAGTGTGCCGCTGTCTGTCATGAGGGCGCCTGTCCCGAAACGCCGTGCAAGGAGTTGGTAGAGGTTCAGTGTGAGTGCGGCCACCGAAAGCAGAGTCGCAGCTGCCAGGAGCTGGCCCGCGAGCACAGTCGGATTGCCACCGCCCAGCTGGCCTCCTCCATGGCGGAGATGTCGCGCGGCAACTACATGGAACTGAGCGAAATCCTTGCCCCGGCCAAGACCAGCAAATCGAACCGAACTTTGGACTGCAACGACGAGTGTCGTCTGCTGGAGCGTAATCGCCGCCTGGCCTCTGCCCTCTCATCGGGCAACCCGGACACGAAGCAAAAGTCGTTGACCAAGTACTCAGAGTTTGTCCGCGGCTTCGCTAAGAGGAATCCGGCTTTGACCAAGAGCGTGTACGAGACGCTGAGCGATCTGGTAAAGCTGGCCAAGGAGAGCAAGCAGCGGTCTCGGAGTCACTCCTTCCCCACGATGAACCGCGAGAAGAGGCAATTGGTGCACGAGCTATGTGAGATTTTTGGCATTGAATCGGTCTCCTACGACAAGGAGCCCAATAGGAATGTTGTGGCCACGGCCCACAAGGAGAGGTGCTGGCTACCTGCCACGAGCATCATGGAGGTGCTGGCTCGTGAGTCTGGACAACGTCGAGTCCCTGTGCCCAGCAACAATGCATGGAGCTTAAAGAAATAG
- Protein Sequence
- MDEYWQQLTNFGVRGGAATNGHGHEAAAQASGNSASGATTSGNSNNNYVNFNQFIQQHNLGGGSSPTASAGTMQHPLSSGNNTNYNIGGGGGAFGLNPPVASIGNSSSFGHLYSQPMFPSYQNGDGTASFSNNYDDTFSNLYTPFGNNPFDFSSSKLQASAPEFVPNLAKLSLNEVPAAAATTPNGNRNITASQETAINVTGTRATQPGGSGGSGGGEPHHLRLSANNYERDRGDRDSRPGSTRQQRRSDYRDDREDRYERNDRKKPQKQQRYDNHRSNKRRDDWNRNRDRINGFPRAADELDTSNESAQPSPEKQQSTQQQQQISPRRAVPPPPAADNEKLSQREKLIRDIEQRRLECLVCVEAIKAHQPTWSCQNCYHVLHLKCTITWASSSKSDVGWRCPACQNVLQELPREYLCFCGKLKNPPVSRTELAHSCGEVCCRIEGCSHACTLLCHPGPCPPCQANVVRSCGCGRSSKTMQCAMKEDLLCGEICDKVLNCAEHRCRAECHAGKCAACAEQVEQHCHCGKQERQVQCTRENQDKRSYSCKESCGKPLPCGNHKCKDSCHAGSCRPCKLSPEQITSCPCGKMPVPAAQRSSCLDPIPTCEGICSRTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPLCKRPCSRSHPCEHPPQHNCHSAATCPPCMIFTTKFCHGGHEQRKTIPCSQANFSCGLACGKPLPCGRHKCIKPCHEGACQSAGEVCRQSCTKPRTLCGHKCAAVCHEGACPETPCKELVEVQCECGHRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPAKTSKSNRTLDCNDECRLLERNRRLASALSSGNPDTKQKSLTKYSEFVRGFAKRNPALTKSVYETLSDLVKLAKESKQRSRSHSFPTMNREKRQLVHELCEIFGIESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWSLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00539339;
- 90% Identity
- iTF_00489062;
- 80% Identity
- -