Basic Information

Insect: Drosophila bipectinata
Gene Symbol: stc
Assembly: GCA_018153845.1
Location: JAECYF010000042.1:3743227-3746917[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 1.6e+04 -4.2 1.6 15 19 442 446 441 446 0.81

2 14 0.07 5.6e+02 0.5 2.5 4 11 475 482 474 483 0.92

3 14 6.2e-07 0.005 16.7 15.1 1 19 487 504 487 504 0.93

4 14 1.1e-07 0.00085 19.1 10.4 1 18 540 557 540 558 0.97

5 14 2 1.6e+04 -6.3 3.9 7 13 562 568 562 569 0.74

6 14 3.6e-09 2.9e-05 23.8 13.6 1 19 598 616 598 616 0.98

7 14 0.00015 1.2 9.1 18.0 4 19 664 679 657 679 0.88

8 14 0.075 6e+02 0.4 11.9 1 11 719 729 719 741 0.79

9 14 5e-10 4e-06 26.6 15.5 1 18 746 763 746 764 0.97

10 14 1.8 1.4e+04 -3.9 0.9 6 10 793 797 793 798 0.81

11 14 2 1.6e+04 -8.8 11.7 10 18 811 820 800 821 0.73

12 14 1.2 9.4e+03 -3.4 1.3 8 13 826 831 825 832 0.80

13 14 8.9e-09 7.1e-05 22.6 10.1 1 16 857 872 857 879 0.87

14 14 6.9e-07 0.0056 16.5 15.8 1 19 889 908 889 908 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	1.6e+04	-4.2	1.6	15	19	442	446	441	446	0.81
2	14	0.07	5.6e+02	0.5	2.5	4	11	475	482	474	483	0.92
3	14	6.2e-07	0.005	16.7	15.1	1	19	487	504	487	504	0.93
4	14	1.1e-07	0.00085	19.1	10.4	1	18	540	557	540	558	0.97
5	14	2	1.6e+04	-6.3	3.9	7	13	562	568	562	569	0.74
6	14	3.6e-09	2.9e-05	23.8	13.6	1	19	598	616	598	616	0.98
7	14	0.00015	1.2	9.1	18.0	4	19	664	679	657	679	0.88
8	14	0.075	6e+02	0.4	11.9	1	11	719	729	719	741	0.79
9	14	5e-10	4e-06	26.6	15.5	1	18	746	763	746	764	0.97
10	14	1.8	1.4e+04	-3.9	0.9	6	10	793	797	793	798	0.81
11	14	2	1.6e+04	-8.8	11.7	10	18	811	820	800	821	0.73
12	14	1.2	9.4e+03	-3.4	1.3	8	13	826	831	825	832	0.80
13	14	8.9e-09	7.1e-05	22.6	10.1	1	16	857	872	857	879	0.87
14	14	6.9e-07	0.0056	16.5	15.8	1	19	889	908	889	908	0.96

Sequence Information

Coding Sequence: ATGGCGGAGTACTGGCAGCAGCTAACTAATGGCGGGGGTGGCGGTGGCGGAAGGGGAGCAGCCGCCAGTGACTCACCGGTGGCATGCAACGGGAGCGGTCCTGAGGCTGTGTCCCACAGCGGCGGCGGCGGCGGCAATAACAACTATGTGAACTTCAATCAGTTCATCATGCAACACAACCTTGGAGGAGGCACGCCCAATGCCTCAAACTCAAGTCCCGGCTACATGCAACATCCCTTGGACAGCGGGAACAACATGAACTTTGCCATCAGCGGAGGCGGAGGAGCCTTCGGCCTAAATCCACCAACAACAGCTACGAACTCTAACAATATCGAGCATTTCTTTTCACAGCCTGTATTCCCACGATATCAAAACGGCGACGGAATCGCCAGTGCCGGCTTCACTAATAGCTTTGATTTGGGAAACCCTAACAACGGCAGCAGCAGCAGCAGTACCTTTTCGAACCTCTACACGCCGTTTGGCAACAATCCGTTCGACTTCAGCGCTTCCAAGTTGCAGGCCTCGGCGCCCGAATTCGTGCCTAATCTGGCCAAGCTGAGTCTAGAGGAGGCTCCAGTGGCCACGACAAACGGAAACAGCACTGCCAGCCCCGAAACTGCCATAAAGGAGATGGAGATACCAGCTAGAGCGGGAGCAGCGAAAGTGGGAGCACCTGGAGGCGTGGGTGCAGCAGGAGGAGCGGCCCGACCAGAAGAGAGAGGCCCCAACAGCTTCCGTCAAAACCAGAACTACGAGAGGGAGCGGGAAAGGGACCGAGATCGCGAGAGGGATCGGGATCGACCGCGACAGCAGCGTCGCTCGGACTACCGCGAGGATCGTGAAGATCGCTATCAGAGGAACGATCGGGATCGTGACCGAGATCGGGATCGGGACAGGGACCGGGACCGGGACCGGGATCGCGATCGCAAGAAGCCGCAAAAGCAGCAGCGCTACGACAATCATCGCAGCAACAAGCGGCGCGATGACTGGAACCGCAACAGGGATCGAATCAACGGATATCCAAGGGCCGTCGACGACTTGGACACGAGCAACGAGAGTGCCCAGCCCTCGCCCGAAAAGCAGCCGCAACATCAGCAAATCTCGCCGAGACGAAACCATCCACCGCCGGCGGATAATGAAAAGCTATCGCAGAGGGAGAAGCTAATCCGCGACATTGAGCAGAGGCGGCTCGAGTGCTTGGTGTGCGTGGAAGCCATCAAAGCGCACCAGCCGACATGGTCGTGCCAGAACTGTTACCACGTTCTGCACCTCAAGTGCACCACCACCTGGGCGAGCAGCTCCAAATCGGAAGTGGGCTGGCGTTGTCCGGCGTGCCAGAATGTGCTGCAGGAGCTGCCGCGCGAGTATCTCTGTTTCTGCGGCAAGCTGAAAAACCCGCCGGTCTCGCGGTCCGAATTGCCGCACAGCTGCGGCGAGGTGTGTTGCCGGATCGAGGGATGCAGTCATGCCTGTACCCTGCTCTGTCACCCGGGCCCATGCCCACCGTGCCAGGCCAATGTGGTTCGCAGCTGTGGATGCGGACGCAGCACCAAGACGATGCAGTGCGCCATGAAGGAGGATCTGCTGTGCGGCGAGATCTGCGACAAGCTGCTCAACTGCGGCGAGCACCGGTGCAAGTCGGAGTGCCATGCAGGAAAGTGCGCTGCCTGCTTGGAGCAGGTGGAGCAGCACTGCCACTGCGGCAAGCAGGACCGCCAGGTGACCTGTACGCGCGAGAGCCAGGACAAGCGAAGCTACTCGTGCAAGGAGAGCTGTGGCAAGCCCCTGCCGTGCGGCAATCACAAGTGCAAGGACTCTTGCCACGCTGGAAGCTGCAGGCCCTGTAAGCTGAGCCCCGACCAGATAACCAGCTGCCCCTGTGGCAAGATGCCTGTGGCGGCCACCCAGCGCACCAGCTGCCTGGACCCCATCCCCACCTGCGAGGGAATCTGCTCGCGGGTCTTGCGCTGCGGCAAGCCGGCCCATCCCCATCAGTGCGGCAGCAAGTGCCACCTGGGCCAGTGTCCACCTTGTCCCAAGCAGACGGCGGTGAAGTGCCGCTGCGGCCACATGGACCAGATGATCAAGTGCCGCCAGCTGTCCACCAGAGCGGACGACGCTCGCTGCAAGCGCCGCTGCACCAAGAAGCGGAGCTGCGGCAAGCACAAGTGCAACGCCGAGTGCTGCATCGACATCGACCACGCTTGTCCGCTGCCCTGCAACCGGACCCTGAGCTGCGGCAAGCACAAGTGCGACCAGCCCTGCCATCGCGGCAACTGCCCGCCCTGCTACCGCAGCAGCTTCGAGGAGCTCTACTGCGAGTGCGGAGCAGAGGTTATCTACCCGCCGGTGCCGTGCGGCACCAAGAAGCCCCTCTGCAAGCGTCCGTGCTCGCGATCGCATCCATGCGAGCATCCGCCGCAACACAATTGCCACTCGGACGCCACTTGTCCGCCCTGCATGCTGTTCACCACCAAGTCTTGCCACGGTGGCCACGAGCAGCGCAAAACCATTCCCTGCTCCCAGGAGAGCTTCAGTTGTGGAATGGCCTGTGCGAAGCCGTTGGCTTGTGGTCGCCACAAGTGCATCAAGCCGTGCCACGAGGGCGCCTGCCAGGCAGCCGGCGACGTTTGCCGTCAGAGCTGCACCAAGCCTCGTCCCACTTGCGGCCACAAGTGCTCAGCACCCTGTCACGAGGGCTCCTGCCCCGAAACGCCCTGCAAGGAGCTAGTGGAGGTACAGTGCGAGTGCGGCAACCGGAAACAGAGTCGCAGCTGCCAGGAGCTGGCTCGCGAGCACAGTCGCATTGCCACGGCTCAGCTGGCCTCATCCATGGCGGAGATGTCCCGGGGAAACTACATGGAGCTCAGCGAGATCTTGGCTCCCTCCAAGGCCAGCAAGTCCAATCGAACCTTGGACTGCAACGATGAGTGCCGACTGTTGGAGCGCAATCGTCGCCTTGCCATGGCACTATCGTCTCGAAATCCAGAGGCTCAGCAAAAGTCCCTGACTAAGTACTCGGAGTTCGTGAAAGGATTCGCTAAGAGGAACCCGGTGCTGACCAAGAGCGTATACGAAACGTTGAGCGACCTCGTTAAGCTGGCCAAGGAGAGCAAGCAGCGGTCCCGCAGCCACTCTTTCCCGACCATGAACCGGGAGAAGAGGCAGTTGGTGCACGAGCTATGCGAGATATTCGGGATAGAATCTGTGTCCTACGACAAGGAGCCCAACCGAAATGTTGTAGCCACGGCGCACAAGGAAAGGTGCTGGTTGCCCGCCACTAGTATCATGGAAGTCCTGGCTCGGGAGTCAGGACAGAGACGCGTCCCTGTACCCAGCAACAATGCATGGAGCTTAAAGAAATAG
Protein Sequence: MAEYWQQLTNGGGGGGGRGAAASDSPVACNGSGPEAVSHSGGGGGNNNYVNFNQFIMQHNLGGGTPNASNSSPGYMQHPLDSGNNMNFAISGGGGAFGLNPPTTATNSNNIEHFFSQPVFPRYQNGDGIASAGFTNSFDLGNPNNGSSSSSTFSNLYTPFGNNPFDFSASKLQASAPEFVPNLAKLSLEEAPVATTNGNSTASPETAIKEMEIPARAGAAKVGAPGGVGAAGGAARPEERGPNSFRQNQNYERERERDRDRERDRDRPRQQRRSDYREDREDRYQRNDRDRDRDRDRDRDRDRDRDRDRKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRAVDDLDTSNESAQPSPEKQPQHQQISPRRNHPPPADNEKLSQREKLIRDIEQRRLECLVCVEAIKAHQPTWSCQNCYHVLHLKCTTTWASSSKSEVGWRCPACQNVLQELPREYLCFCGKLKNPPVSRSELPHSCGEVCCRIEGCSHACTLLCHPGPCPPCQANVVRSCGCGRSTKTMQCAMKEDLLCGEICDKLLNCGEHRCKSECHAGKCAACLEQVEQHCHCGKQDRQVTCTRESQDKRSYSCKESCGKPLPCGNHKCKDSCHAGSCRPCKLSPDQITSCPCGKMPVAATQRTSCLDPIPTCEGICSRVLRCGKPAHPHQCGSKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPLCKRPCSRSHPCEHPPQHNCHSDATCPPCMLFTTKSCHGGHEQRKTIPCSQESFSCGMACAKPLACGRHKCIKPCHEGACQAAGDVCRQSCTKPRPTCGHKCSAPCHEGSCPETPCKELVEVQCECGNRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPSKASKSNRTLDCNDECRLLERNRRLAMALSSRNPEAQQKSLTKYSEFVKGFAKRNPVLTKSVYETLSDLVKLAKESKQRSRSHSFPTMNREKRQLVHELCEIFGIESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWSLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00539339;
90% Identity: iTF_00539339;
80% Identity: -