Dkan000253.1
Basic Information
- Insect
- Drosophila kanapiae
- Gene Symbol
- stc
- Assembly
- GCA_008042475.1
- Location
- VNJM01000305.1:663192-666679[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 2 1.9e+04 -4.1 1.6 15 19 400 404 399 404 0.81 2 14 0.048 4.4e+02 1.1 2.2 4 11 433 440 432 441 0.91 3 14 5.9e-07 0.0055 16.8 15.1 1 19 445 462 445 462 0.93 4 14 5.1e-07 0.0047 17.0 9.9 1 18 498 515 498 516 0.98 5 14 2 1.9e+04 -6.3 3.9 7 13 520 526 520 527 0.74 6 14 3.5e-09 3.2e-05 23.9 13.6 1 19 556 574 556 574 0.98 7 14 2.4e-05 0.22 11.6 17.0 4 19 622 637 615 637 0.88 8 14 0.059 5.5e+02 0.8 11.6 1 11 677 687 677 699 0.79 9 14 4.8e-10 4.5e-06 26.6 15.5 1 18 704 721 704 722 0.97 10 14 1.7 1.6e+04 -3.9 0.9 6 10 751 755 751 756 0.81 11 14 2 1.9e+04 -8.9 11.5 10 18 769 778 758 779 0.71 12 14 2 1.9e+04 -4.4 1.6 10 13 786 789 784 790 0.79 13 14 1.4e-08 0.00013 21.9 10.9 1 17 815 831 815 837 0.93 14 14 5.2e-07 0.0048 16.9 13.1 1 19 847 866 847 866 0.96
Sequence Information
- Coding Sequence
- ATGGACGAGTATTGGCAGCAGCTGACCAACGGAGGAGGAACAGCCCCTAATGAGTCATCCGTGGTTTACAATGGCCATGGTCACGAGGCGGCGGGGCAAGCGTCTGGCAACGGTGCCAAcaacggcggcaacaacaactatgTGAACTTCAATCAGTTCATCCAACAGCACAACCTGGGCGGTGGATCATCGCCCACTGCCAGCGCTGGAACGATGCAGCATCCGCTGAGCAGCGGCAATAACACGAACTACaacatcggcggcggcggaggagccttcggcctgaatccgcCAGCGGCTCCGCCAGTGAATTCCAACAATTTTGGGCATCAATATTCGCAGCCCATATTTCCATCCTACCAAAATGGCGATGGCGGCGCCTCCTTCACCAGCGGCTATGATGACACCTTTTCGAGTCTGTACACACCGTTTGGCAACAATCCCTTTGACTTCAGCTCCTCCAAGCTGCAGGCCTCGGCCCCCGAATTTGTGCCCAGCCTGGCCAAGCTGAGTCTGAACGAGGCTCCGGCGGAGGCAGTCACGACGCCAAACGGAAACCGGAACATCACTGCCAGCCAAGAGACTGCCGTTAGTGTGACAGGAACTAGGGGAAGCAGCGCATCAGGAGGAGTCTCCGAACGAGGAGACCCCCACCACCACCGTTTAAGCGCTAACAATTACGAAAGAGATCGCGGTGACAGAGACTCACGACCGGGCAGCACCCGGCAGCAGCGTCGCTCCGACTATCGCGATGACCGCGAGGATCGATACGAGCGAAACGATCGAAAGAAAccgcagaagcagcagcgctACGACAATCATCGAAGCAATAAACGAAGGGATGACTGGAATCGCAACAGGGACCGCATCAACGGCTATCCACGGGCCGCCGACGAGCTAGATACGAGCAACGAAAGTGCCCAGCCGTCGCCCGAAAAGCAGCAAacgcagacgcagcagcagcaaatctcCCCACGGAGAGCTCAACCGCCTCCACCGGCGGCCGATAATGAGAAGCTATCGCAGCGGGAGAAACTCATACGCGACATCGAGCAGCGGCGACTGGAATGCCTGGTGTGCGTGGAGGCGATCAAGGCGCATCAGCCGACGTGGTCCTGCCAAAACTGCTACCACGTTCTACACCTCAAGTGCACTGTTACATGGGCGAGCAGCTCGAAGTCGGATTTGGGATGGCGGTGCCCCGCCTGTCAGAATGTCCTCCAAGAAGTGCCGCGCGAGTATCTCTGTTTTTGCGGAAAATTCAAGAACCCGCCGGTGTCCCGCACGGAACTGGCGCACAGCTGCGGCGAGGTTTGCTGCCGTATTGAAGGATGCAGCCATGCTTGCACACTACTCTGCCACCCGGGCCCCTGTCCGCCTTGCCAGGCCAACGTGGTGCGAAGCTGCGGCTGCGGCCGCAGCTCCAAGTCCATGCAGTGCGCCATGAAGGAGGACCTGCTATGCGGCGAGATCTGTGACAAGGCGCTCAATTGTGGCGAGCATCGGTGCCGCGCCGAGTGCCATGCGGGCAAGTGCGCAGCTTGTGCGGAGCAGGTGGAGCAGCACTGTCACTGCGGCAAGCAGGACCGTCAGGTGCTGTGCACGCGCGAGAACCAGGACAAGCGCAGCTACTCGTGCAAGGAGAGCTGCGGGAAGCCACTGCCATGCGGTAACCACAAGTGCAAGGACTCGTGCCACGCAGGCAGCTGCAGGCCCTGCAAGCTGAGTCCCGAACAGATAACCAGCTGTCCGTGCGGTAAGATGCCCGTGCCGGCTGGCCAACGTACGAGCTGCCTGGACCCGATACCAACGTGCGAGGGTATCTGCTCGAGGACACTGCGCTGCGGAAAGCCAGCTCATCCGCATCAGTGCGCCAGCAAGTGCCACCTGGGCCAGTGTCCGCCGTGTCCCAAGCAAACGGCTGTGAAGTGTCGCTGCGGCCACATGGATCAGATGATCAAGTGCCGGCAGTTGTCCACCCGGGCGGACGATGCCCGCTGCAAGCGTCGCTGCACGAAGAAGCGCAGCTGCGGCAAGCACAAATGCAACGCCGAGTGCTGCATCGACATTGATCACGCCTGCCCGTTGCCCTGCAACCGGACGCTGAGCTGCGGCAAGCACAAGTGTGATCAGCCCTGCCATCGGGGCAATTGTCCGCCCTGCTATCGCAGCAGCTTCGAGGAGCTGTACTGCGAGTGCGGGACCGAAGTGATATATCCGCCGGTGCCGTGCGGCACCAAGAAGCCGCTCTGCAAACGGCCCTGCTCGCGTTCCCATCCCTGCGAGCATCCGCCGCAGCACAACTGCCATTCGGCGGCCACATGTCCGCCCTGCATGATATTCACCACCAAGTACTGCCACGGTGGTCACGAGCAGCGCAAGACCATACCCTGCTCGCAGGCCAACTTTAGCTGCGGCTTGGCGTGCGGCAAGCCTTTGCCTTGCGGTCGCCATAAATGCATCAAGCCGTGTCACGAGGGCGCCTGTCAAACCGCTGGCGAGATATGCCGTCAGAGCTGCACCAAGCCGCGAGCGATCTGTGGCCATAAATGTGCCGCTGCCTGTCACGAGGGCGCCTGTCCCGAGACGCCGTGCAAGGAGCTGGTCGAGGTGCAGTGTGAATGCGGCCACCGGAAGCAGAGTCGCAGCTGCCAGGAGCTGGCAAGGGAGCACAGTCGCATAGCCACCGCCCAGTTGGCCTCCTCCATGGCGGAGATGTCGCGCGGAAACTACATGGAGTTGAGCGAGATCCTGGCCCCGGCCAAGTCCAACAAATCAAACCGAACTTTGGACTGCAACGACGAGTGCCGGCTGCTGGAGCGTAATCGTCGCCTGGCTTCTGCTCTGTCTTCGGGTAATCCAGACACCAAACAAAAGTCGTTGACCAAGTACTCGGAGTTTGTGCGCGGCTTTGCGAAGAGGAATCCAGCTCTGACCAAGAGCGTATACGAAACGCTAAGCGATCTGGTgaagctggccaaggagaGCAAGCAGCGTTCGCGGAGCCACTCCTTCCCCACGATGAACCGCGAAAAGAGGCAGTTGGTGCACGAGCTGTGCGAGATATTTGGCATTGAGTCGGTCTCCTACGACAAGGAGCCCAATCGGAATGTGGTGGCCACCGCCCACAAAGAGAGGtgCTGGCAGCCTGCCACGAGCATTATGGAGGTGCTGGCTCGTGAGTCCGGGCAACGTCGCGTCCCTGTGCCCAGCAACAATGCATGgagcttaaaaaaatag
- Protein Sequence
- MDEYWQQLTNGGGTAPNESSVVYNGHGHEAAGQASGNGANNGGNNNYVNFNQFIQQHNLGGGSSPTASAGTMQHPLSSGNNTNYNIGGGGGAFGLNPPAAPPVNSNNFGHQYSQPIFPSYQNGDGGASFTSGYDDTFSSLYTPFGNNPFDFSSSKLQASAPEFVPSLAKLSLNEAPAEAVTTPNGNRNITASQETAVSVTGTRGSSASGGVSERGDPHHHRLSANNYERDRGDRDSRPGSTRQQRRSDYRDDREDRYERNDRKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRAADELDTSNESAQPSPEKQQTQTQQQQISPRRAQPPPPAADNEKLSQREKLIRDIEQRRLECLVCVEAIKAHQPTWSCQNCYHVLHLKCTVTWASSSKSDLGWRCPACQNVLQEVPREYLCFCGKFKNPPVSRTELAHSCGEVCCRIEGCSHACTLLCHPGPCPPCQANVVRSCGCGRSSKSMQCAMKEDLLCGEICDKALNCGEHRCRAECHAGKCAACAEQVEQHCHCGKQDRQVLCTRENQDKRSYSCKESCGKPLPCGNHKCKDSCHAGSCRPCKLSPEQITSCPCGKMPVPAGQRTSCLDPIPTCEGICSRTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGTEVIYPPVPCGTKKPLCKRPCSRSHPCEHPPQHNCHSAATCPPCMIFTTKYCHGGHEQRKTIPCSQANFSCGLACGKPLPCGRHKCIKPCHEGACQTAGEICRQSCTKPRAICGHKCAAACHEGACPETPCKELVEVQCECGHRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPAKSNKSNRTLDCNDECRLLERNRRLASALSSGNPDTKQKSLTKYSEFVRGFAKRNPALTKSVYETLSDLVKLAKESKQRSRSHSFPTMNREKRQLVHELCEIFGIESVSYDKEPNRNVVATAHKERCWQPATSIMEVLARESGQRRVPVPSNNAWSLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00539339;
- 90% Identity
- iTF_00489062;
- 80% Identity
- -