Basic Information

Insect: Drosophila tsacasi
Gene Symbol: stc
Assembly: GCA_018904565.1
Location: JAEIHY010019636.1:23978-27516[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 2.2e+04 -4.1 1.6 15 19 401 405 400 405 0.81

2 14 0.048 5.3e+02 1.1 2.2 4 11 434 441 433 442 0.91

3 14 5.9e-07 0.0066 16.7 15.1 1 19 446 463 446 463 0.93

4 14 1.1e-05 0.12 12.7 8.9 1 18 499 516 499 517 0.95

5 14 2 2.2e+04 -6.3 3.9 7 13 521 527 521 528 0.74

6 14 3.5e-09 3.9e-05 23.9 13.6 1 19 557 575 557 575 0.98

7 14 2.4e-05 0.27 11.6 17.0 4 19 623 638 616 638 0.88

8 14 0.059 6.6e+02 0.8 11.6 1 11 678 688 678 700 0.79

9 14 4.8e-10 5.3e-06 26.6 15.5 1 18 705 722 705 723 0.97

10 14 1.7 1.9e+04 -3.9 0.9 6 10 752 756 752 757 0.81

11 14 2 2.2e+04 -8.9 11.5 10 18 770 779 759 780 0.71

12 14 2 2.2e+04 -4.4 1.5 9 13 786 790 785 791 0.79

13 14 1.1e-08 0.00012 22.3 10.9 1 17 816 832 816 838 0.89

14 14 8e-07 0.0089 16.3 13.6 1 19 848 867 848 867 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	2.2e+04	-4.1	1.6	15	19	401	405	400	405	0.81
2	14	0.048	5.3e+02	1.1	2.2	4	11	434	441	433	442	0.91
3	14	5.9e-07	0.0066	16.7	15.1	1	19	446	463	446	463	0.93
4	14	1.1e-05	0.12	12.7	8.9	1	18	499	516	499	517	0.95
5	14	2	2.2e+04	-6.3	3.9	7	13	521	527	521	528	0.74
6	14	3.5e-09	3.9e-05	23.9	13.6	1	19	557	575	557	575	0.98
7	14	2.4e-05	0.27	11.6	17.0	4	19	623	638	616	638	0.88
8	14	0.059	6.6e+02	0.8	11.6	1	11	678	688	678	700	0.79
9	14	4.8e-10	5.3e-06	26.6	15.5	1	18	705	722	705	723	0.97
10	14	1.7	1.9e+04	-3.9	0.9	6	10	752	756	752	757	0.81
11	14	2	2.2e+04	-8.9	11.5	10	18	770	779	759	780	0.71
12	14	2	2.2e+04	-4.4	1.5	9	13	786	790	785	791	0.79
13	14	1.1e-08	0.00012	22.3	10.9	1	17	816	832	816	838	0.89
14	14	8e-07	0.0089	16.3	13.6	1	19	848	867	848	867	0.96

Sequence Information

Coding Sequence: ATGGACGAGTATTGGCAGCAGCTGACCAACGGTGGCGTTCGTGGAGGAGCAGCCACCAACGGTCATGGTCACGAGGCAGCGGCTCAAGCTGCGGGAAACAGCGCCAGCGGAGCTACTACCAGTGGCAACAGCAACAACAACTATGTGAACTTTAATCAGTTCATTCAGCAGCACAACCTGGGCGGAGGATCATCGCCTACTCCCAGCGCCGGAACAATGCAGCACCCACTGAGCAGCGGCAATAACACTAACTACAACATCGGCGGCGGAGGAGGAGCCTTCGGCCTGAATCCGCCAGTGGCTTCCACAGGGAGTTCCAACAGCTTTGGGCATCTATATTCACAGCCCATGTTTCCATCGTACCAAAATGGCGATGGCACCGCCTCCTTTAGTAACAACTATGATGACACCTTTTCGAATCTGTATACGCCGTTCGGCAACAACCCCTTCGACTTCAGCTCTTCCAAGCTGCAGGCCTCAGCCCCCGAATTTGTGCCCAATCTGGCCAAGCTGAGTCTGAACGAGGTGCCGGCGGCGGCGGCGGCTACGACGCCAAACGGGAACAGGAACATCACTGCCAGCCAAGAAACTGCCATTAGTGTGACGGGAACGAGGGCGCCACAACCGGGGAGAAGCGGTGGATCAGGAGGAGGAGAGCCTCACCACCTTCGCTTATCCGCCAACAATTACGAAAGAGATCGCGGTGACAGAGACTCGCGACCGGGAAGTACCAGGCAGCAGCGTCGCTCCGACTACCGCGACGACCGCGAGGATCGATACGAGCGAAACGATCGCAAGAAGCCCCAGAAGCAGCAGCGCTACGACAATCATAGAAGCAACAAACGAAGGGACGATTGGAACCGCAACAGGGACCGCATCAACGGTTTTCCCCGGGCCGCCGACGAGCTGGACACGAGCAACGAGAGTGCTCAGCCGTCGCCCGAAAAGCAGCAAACGACGCAGCAGCAGGTATCTCCGCGAAGAACTGTGCCGCCTCCACCGGCGGCGGATAATGAGAAGCTATCGCAGCGGGAGAAACTCATACGCGATATCGAGCAGCGGCGCCTCGAGTGCCTCGTGTGCGTGGAGGCCATCAAGGCGCATCAGCCGACGTGGTCCTGCCAGAACTGCTACCACGTTCTCCACCTCAAGTGCACTATTACCTGGGCGAGCAGCTCCAAGTCAGATGTCGGCTGGCGGTGCCCCGCCTGTCAGAATGTCCTCCAAGAGCTGCCGCGCGAGTATCTCTGCTTTTGCGGAAAACTCAAGAACCCGCCGGTGTCGCGCACAGAGCTGGCCCACAGCTGCGGCGAGGTTTGTTGCCGGATCGAGGGCTGCAGCCATGCGTGCACACTTCTATGCCACCCGGGACCCTGTCCACCGTGCCAGGCCAATGTAGTGCGCAGCTGTGGCTGCGGCCGCAGCTCGAAGACCATGCAGTGCGCCATGAAAGAAGATCTCCTCTGTGGCGAGATCTGCGACAAGCTGCTCAACTGTGCCGAGCATCGGTGTCTCGCCGAGTGTCACCCGGGCAAGTGTGCTGCTTGTGCGGAACAGGTGGAGCAGCACTGTCACTGCGGCAAGCAGGAGCGCCAGGTGCAGTGCACGCGCGAGAACCAGGACAAGCGCAGCTACTCGTGCAAGGAGAGTTGCGGGAAGCCCCTGCCCTGCGGTAACCACAAGTGCAAGGACTCTTGCCACGCGGGAAGCTGTAGGCCTTGTAAGCTAAGTCCCGAACAGATAACCAGCTGTCCTTGCGGCAAGATGCCGGTGCCGGCTGCCCAACGCTCGAGCTGCCTAGATCCCATACCAACTTGCGAGGGAATCTGTTCGAGGACGCTGCGCTGCGGCAAGCCGGCGCATCCCCATCAATGCGCCAGCAAGTGTCACTTGGGCCAGTGCCCGCCGTGTCCCAAGCAAACGGCTGTCAAGTGTCGCTGCGGCCACATGGATCAGATGATCAAGTGCCGGCAGTTGTCCACTCGGGCAGACGATGCCCGCTGCAAGCGACGCTGCACGAAGAAGCGCAGCTGCGGCAAGCACAAGTGCAACGCGGAGTGTTGCATCGACATCGATCATGCCTGCCCGCTGCCCTGCAACCGCACTCTGAGCTGCGGCAAGCACAAGTGCGACCAGCCCTGCCACCGCGGCAACTGTCCGCCGTGCTACCGCAGCAGCTTCGAGGAGCTCTACTGCGAGTGCGGGGCCGAAGTGATATATCCGCCGGTACCGTGTGGCACCAAGAAGCCGCTCTGCAAGCGACCCTGCTCGCGGTCGCATCCCTGCGAGCATCCGCCGCAGCACAACTGCCACTCGGCGGCCACCTGTCCGCCCTGCATGATTTTTACCACAAAGTTTTGCCACGGCGGTCACGAGCAGCGCAAGACTATTCCCTGCTCGCAGGCAAACTTCAGTTGTGGCCTGGCGTGCGGCAAGCCCTTGCCATGTGGCCGTCATAAGTGCATCAAGCCGTGCCACGAGGGGGCCTGTCAGAGTGCCGGCGAGGTGTGCCGGCAGAGCTGCACCAAGCCGCGGACGCTCTGCGGCCACAAGTGTGCCGCTTCCTGTCACGAAGGTGCCTGTCCCGAGACGCCGTGCAAGGAGCTGGTGGAGGTTCAGTGCGAGTGCGGCCACCGAAAGCAGAGTCGCAGCTGCCAGGAGCTAGCCAGGGAGCACAGTCGGATTGCCACCGCCCAGCTGGCCTCCTCCATGGCGGAGATGTCGCGCGGCAACTACATGGAGCTGAGCGAGATTCTGGCCCCGGCCAAGACCAGCAAATCGAACCGAACGCTGGACTGCAACGACGAGTGTCGTCTGCTGGAGCGTAATCGCCGCCTGGCGTCTGCTCTGTCGTCGGGCAACCCGGACACGAAGCAAAAGTCGCTGACCAAGTACTCGGAGTTTGTCCGCGGCTTTGCCAAGAGGAATCCGGCTTTGACCAAGAGCGTGTACGAGACGCTGAGCGATCTGGTGAAGCTGGCCAAGGAGAGCAAGCAGCGGTCGCGGAGCCACTCCTTCCCCACGATGAACCGCGAGAAGAGGCAACTGGTGCACGAGCTATGTGAGATATTTGGCATTGAATCGGTCTCATACGACAAGGAGCCCAATAGGAATGTTGTGGCCACGGCCCACAAGGAGAGGTGCTGGTTGCCTGCCACGAGCATCATGGAGGTGCTGGCTCGTGAGTCTGGACAACGTCGAGTCCCCGTGCCCAGCAACAATGCATGGAGCTTAAAGAAATAG
Protein Sequence: MDEYWQQLTNGGVRGGAATNGHGHEAAAQAAGNSASGATTSGNSNNNYVNFNQFIQQHNLGGGSSPTPSAGTMQHPLSSGNNTNYNIGGGGGAFGLNPPVASTGSSNSFGHLYSQPMFPSYQNGDGTASFSNNYDDTFSNLYTPFGNNPFDFSSSKLQASAPEFVPNLAKLSLNEVPAAAAATTPNGNRNITASQETAISVTGTRAPQPGRSGGSGGGEPHHLRLSANNYERDRGDRDSRPGSTRQQRRSDYRDDREDRYERNDRKKPQKQQRYDNHRSNKRRDDWNRNRDRINGFPRAADELDTSNESAQPSPEKQQTTQQQVSPRRTVPPPPAADNEKLSQREKLIRDIEQRRLECLVCVEAIKAHQPTWSCQNCYHVLHLKCTITWASSSKSDVGWRCPACQNVLQELPREYLCFCGKLKNPPVSRTELAHSCGEVCCRIEGCSHACTLLCHPGPCPPCQANVVRSCGCGRSSKTMQCAMKEDLLCGEICDKLLNCAEHRCLAECHPGKCAACAEQVEQHCHCGKQERQVQCTRENQDKRSYSCKESCGKPLPCGNHKCKDSCHAGSCRPCKLSPEQITSCPCGKMPVPAAQRSSCLDPIPTCEGICSRTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPLCKRPCSRSHPCEHPPQHNCHSAATCPPCMIFTTKFCHGGHEQRKTIPCSQANFSCGLACGKPLPCGRHKCIKPCHEGACQSAGEVCRQSCTKPRTLCGHKCAASCHEGACPETPCKELVEVQCECGHRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPAKTSKSNRTLDCNDECRLLERNRRLASALSSGNPDTKQKSLTKYSEFVRGFAKRNPALTKSVYETLSDLVKLAKESKQRSRSHSFPTMNREKRQLVHELCEIFGIESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWSLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00539339;
90% Identity: iTF_00489062;
80% Identity: -