Pful021914.1
Basic Information
- Insect
- Pycnomerus fuliginosus
- Gene Symbol
- bab1
- Assembly
- GCA_963924575.1
- Location
- OZ004622.1:6341913-6352293[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.1e-13 6.4e-11 42.7 0.1 1 45 343 387 343 387 0.97
Sequence Information
- Coding Sequence
- ATGTGCGCAGCCCAACAATACTGCCTGAGGTGGAACAACCACCGCTCGAATTTGCTCACCGTCTTCGACGAGCTGCTGCAAAACGAAGCCTTCACCGACGTGACTCTCGCCTGCGAAGGGGGCAACTCCATAAAATGCCACCGCATGGTTCTAGCAGCTTGTTCTCCGtatttccaaaatttgttcacgcGACTGCCGTGCAAACACCCCGTCGTAGTTTTAAAAGACGTCAaatacacggaaatcaaagcgATATTAGAGTACATGTACAGGGGGGAGGTAAACGTGGCTCAGGATCAACTTGCGGCTTTGCTTAAAGTAGCAGAAGCTCTTAAAGTCAAAGGATTAGTGGAGGAAAACAGATCTGGAGCTACGAGTTTTTCGAGCAGTAGGGAGGATGAACCCATGGACCATTCTCCCAGCGGTATTCCTAGTTCTTCTAGTGTGCAAAATGTACATAGCAGCAGCAATAACTCACCACCGCACTCGACGAATTCTCCCTACAAAAACTCCTACAGCAATATCTATCCTGGAAAATCCAGCAATATGGATAGAAGCTCCAGGATGAACGTGCCCATATGGGCAGTTCCGGGACTGCCCATCCCCCCTCATTCCACCTCAGCCCCGAATATGTTGAGTAGCTACTACGAAACTGCCAGTGACATGTCTCCATTGAGGAGGAAAAAATTATCCAGTCTTCTCATGAACAGGGACACTCCTATTTTGAGAACTGTTTTGGGTCAAGGACAGGCGGATTCTTCTCAACCCGTTAGCTTGGTTTGTCATCCGGACAGTCACCAGCAGCAGTCGAACGGACCTGAGGATCGTACGGAAAAACACATCAAAAACGAGCCCTCAGAAGACGCCCAATCGCCCTACACCGACTTTCGGGTGATGAACGACGACGACGACAAATCCAAACTCGCAATACCCTCCTCTTCCCCGCAGTCCTACTCCGTTTCCACGGGCATCGCGACTTACGTCCCCTCAACGCAAAAACCCGAATGGAAACGATACAAGCAATACACCCGCGACGACATAATGTCCGCCATAGAAGCCGTGCGAAACGGAATGTCCGCCCTTCAGTCCGCTCGAAAATACGGTGTCCCCTCGCGGACACTTTACGACAAAGTCAAAAAACTGGGCATAACGACGAGTCGCCCTTTTAAGAGGGGTTCCAACGGTAGTCCGGCCTGCTTCCCTTACGGCCTCAGCGGCACTGGGTCCCCCTACGGCGGACATTTGTCGGAAAACGACGACACGTTAACGAACAACAACACGTCGCTGCTGGAAGCGACTTTTTTGCAGCACGCGTTTGAGGGTCGCGGGGGCGACGATAGGGAGGCTTTGGCGgcgatggcggtggcggcggcgGCCCATGCGGCTGTTTCGGGACATTCGACGAGTCCTTCAAATCCGGGACATGCGACGAGTCCGAGTCCGAGTCCCACGTTGTTGAAATACATGAGGCAGTGCAGTATGACGCCGTCGCCAGCCACAGGAAGCGACCACCATCACAGCGAGACCAATGGCAGTTCGGAAAGGGATCGCGATGATGACGATGACCAAGTCGAGGACTTGTCGGTGGGGAGGAAGCAGGAGAGTCGGGTGATAATGCCCCCCATGAACCAGGTATCGACGATAATGAAGAAGGAGGAGCTGCTGAAGGAAATAATCAAAGACGAGGCGCGAAGAGAGGTAAGCCTCGAGGAGGCGGAATAG
- Protein Sequence
- MCAAQQYCLRWNNHRSNLLTVFDELLQNEAFTDVTLACEGGNSIKCHRMVLAACSPYFQNLFTRLPCKHPVVVLKDVKYTEIKAILEYMYRGEVNVAQDQLAALLKVAEALKVKGLVEENRSGATSFSSSREDEPMDHSPSGIPSSSSVQNVHSSSNNSPPHSTNSPYKNSYSNIYPGKSSNMDRSSRMNVPIWAVPGLPIPPHSTSAPNMLSSYYETASDMSPLRRKKLSSLLMNRDTPILRTVLGQGQADSSQPVSLVCHPDSHQQQSNGPEDRTEKHIKNEPSEDAQSPYTDFRVMNDDDDKSKLAIPSSSPQSYSVSTGIATYVPSTQKPEWKRYKQYTRDDIMSAIEAVRNGMSALQSARKYGVPSRTLYDKVKKLGITTSRPFKRGSNGSPACFPYGLSGTGSPYGGHLSENDDTLTNNNTSLLEATFLQHAFEGRGGDDREALAAMAVAAAAHAAVSGHSTSPSNPGHATSPSPSPTLLKYMRQCSMTPSPATGSDHHHSETNGSSERDRDDDDDQVEDLSVGRKQESRVIMPPMNQVSTIMKKEELLKEIIKDEARREVSLEEAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01278274; iTF_01283298; iTF_01329710; iTF_01329913; iTF_01283516; iTF_00870676; iTF_00870484; iTF_01409879; iTF_01410096; iTF_00813637; iTF_00814505; iTF_00814322; iTF_00813822; iTF_00987053; iTF_00987241; iTF_00929687; iTF_00929495; iTF_01022328; iTF_01022132; iTF_00841947; iTF_00841765; iTF_01567751; iTF_01568133; iTF_00752873; iTF_00752874; iTF_00753082; iTF_00753083; iTF_00167722; iTF_00167590; iTF_01480047; iTF_01480238; iTF_00415217; iTF_00414986; iTF_01566165; iTF_01566349; iTF_01481015; iTF_01480786; iTF_01311480; iTF_01311658; iTF_00639646; iTF_00639458; iTF_01366431; iTF_01366253;
- 90% Identity
- iTF_01278274;
- 80% Identity
- iTF_01278274;