Cang011466.1
Basic Information
- Insect
- Cynaeus angustus
- Gene Symbol
- bab2
- Assembly
- GCA_030157275.1
- Location
- CM058063.1:552966-557152[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-14 5.6e-11 42.3 0.0 2 45 362 405 361 405 0.93 2 2 0.14 2.4e+02 1.9 0.2 6 18 471 484 469 486 0.81
Sequence Information
- Coding Sequence
- ATGTGTGCAGCTCAGCAATACTGCCTCCGGTGGAACAACCACCGCTCGAatttattaacagtttttgACGAACTCCTCCAAAACGAAGCATTCACCGATGTAACCCTCGCTTGCGAAGGCGGCAATCCTATAAAATGCCATCGAATGGTCTTAGCCGCTTGCTCCCCGTATTTCCAGAGCCTCTTCACGGATCTACCATGCAAGCATCCCGTGGTAGTCCTCAAAGACGTCAAATACACCGAAATCAAAGCCATATTAGAATACATGTACCGCGGAGAAGTAAACGTTGCTCAAGATCAGCTTGCAGCTTTGCTCAAAGTAGCCGAAGCGCTCAAAGTTAAAGGCTTAGTCGAAGAAAACAGATCCAGCGGTGCTAGTTTCTCTTGCAGAGACGAAGAACCGATGGAGCACTCTCCTACGGGAACTAGCAACTCGAATTCTAGTATCCAGAACGTGCATAGTAGCAGTAACAATTCGCCGCCTCATTCTACGAATAGCCATTATAAGAGTCCTTACGGTGGGATGTACTCCGGGAAGTCCGGGAGTATGGAGAGGAATTCACGGATGAATTTACCGATGTGGGCGATTCCCGGATTGCCTATTCCTCCACATTCTAATACTGTTCCTAATCAAAATCATCCTCATGCTGCTGCAACGGCTGCGGCGGCCATGTTGAGCAATTGTTACGAAGCGGCGACGGACATGTCGCCTTTGAGAAGGAAGAAATTGTCAAGTCTTCTTATGAATAGAGACACTCCTATTTTGAGGACTGTTCTAGGACAAGGTCAAGCCGATTCATCGCAACCTGTGAGTTTAGTGTGTCATCCGGACAGCCATGATCAACAATCAAACGGACCGGACCCAGAACGCATGGACAAGCACTTGAAAAGCGAGCCCTCCGAGGACGCCCAATCCCCCTACACCGACTTCACAATGATCAACGACGaggaagaaaaatcaaaactagCAATTCCGTCCTCTTCTCCCCAATCCCACTCGAACGAAATGCGAGCCGTCTCCTCCGGAATCGCCACCTACGTCCCCACTCAGAGGCCCGAATGGAAACGTTACAAGCAATACACTCGCCAAGACATCCTCTCGGCCATCGACTCGGTCCGAAACGGGATGTCCGCGCTCCAAGCCGCTAAAAAGTACGGCGTTCCTTCCAGGACTCTCTACGACAAAGTGAAGAAGTTGGGGATAACGACCAGCCGACCTTTCAAACGCGGCTCCAACGGGAGTCCCGCCTGTTTCCCTTACGGCCTCAGCGGCACCGGCTCCCCGTACATGTCGGAGAACGACGAGACTCCTACCAACAACAACACTTCGTTGTTGGAAGCGACGTTCTTGCAGCACGCGTTCGAGAGTCGCGGAGGCGACGATCGAGAGGCTCTGGCGGCGATGGcggtggcggcggcggcgCACGCGGTCGTCTCGGGCCACTCCACGAGTCCCTCGAACCACGGCCACGCCACGAGTCCCAGTCCGAGTCCCACTTTGATGAAGTACATGAGACAGAGCAGTTTGACTCCTTCGCCGGCGCCTCACAGCGAGACGAACGGGAGTTCGGAGAGAGAGcgcgacgacgacgacgaccaAGTGGAGGACCTGTCCGTCGGAAGGAAACAAGAATCGCGCGTGATCATGCCTCCGATGAACCAAGTGTCGACGATAATGAAGAAGGAGGAGCTGCTGAAAGACATCATCAAGGAGGAGGCGCGCCGGGAGATAAGCGTGGAGGAGGCGGAGTAG
- Protein Sequence
- MCAAQQYCLRWNNHRSNLLTVFDELLQNEAFTDVTLACEGGNPIKCHRMVLAACSPYFQSLFTDLPCKHPVVVLKDVKYTEIKAILEYMYRGEVNVAQDQLAALLKVAEALKVKGLVEENRSSGASFSCRDEEPMEHSPTGTSNSNSSIQNVHSSSNNSPPHSTNSHYKSPYGGMYSGKSGSMERNSRMNLPMWAIPGLPIPPHSNTVPNQNHPHAAATAAAAMLSNCYEAATDMSPLRRKKLSSLLMNRDTPILRTVLGQGQADSSQPVSLVCHPDSHDQQSNGPDPERMDKHLKSEPSEDAQSPYTDFTMINDEEEKSKLAIPSSSPQSHSNEMRAVSSGIATYVPTQRPEWKRYKQYTRQDILSAIDSVRNGMSALQAAKKYGVPSRTLYDKVKKLGITTSRPFKRGSNGSPACFPYGLSGTGSPYMSENDETPTNNNTSLLEATFLQHAFESRGGDDREALAAMAVAAAAHAVVSGHSTSPSNHGHATSPSPSPTLMKYMRQSSLTPSPAPHSETNGSSERERDDDDDQVEDLSVGRKQESRVIMPPMNQVSTIMKKEELLKDIIKEEARREISVEEAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01277622;
- 90% Identity
- iTF_01409879;
- 80% Identity
- iTF_00415217;