Basic Information

Insect: Asbolus verrucosus
Gene Symbol: bab2
Assembly: GCA_004193795.1
Location: QDEB01097367.1:12846-14675[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 1.2 2.9e+03 -2.2 0.1 25 40 168 183 166 186 0.72

2 3 2.5e-15 6.1e-12 44.8 0.1 2 45 380 423 379 423 0.93

3 3 0.066 1.6e+02 1.8 0.2 6 18 492 505 490 507 0.81

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	1.2	2.9e+03	-2.2	0.1	25	40	168	183	166	186	0.72
2	3	2.5e-15	6.1e-12	44.8	0.1	2	45	380	423	379	423	0.93
3	3	0.066	1.6e+02	1.8	0.2	6	18	492	505	490	507	0.81

Sequence Information

Coding Sequence: ATGTGTGCAGCTCAGCAGTACTGCCTGAGGTGGAACAACCACCGTTCGAATCTACTGACTGTGTTCGACGAACTCCTTCAGAACGAAGCTTTCACCGACGTAACTCTCGCCTGCGAAGGTGGCAACCCAATAAAATGCCATCGGATGGTTCTAGCCGCCTGTTCGccgtattttcaaaatctttttacGGACCTACCGTGTAAGCATCCCGTGGTGGTTCTGAAGGATGTCAAGTACACAGAAATCAAAGCGATACTGGAGTACATGTACAGAGGCGAAGTGAATGTTGCACAAGATCAGCTCGCTGCCTTGCTCAAAGTGGCTGAAGCCTTGAAAGTTAAGGGTCTAGTTGAAGAGAACAGATCCAGCGGTACAAGTTTTTCGTGTAATCGGGATGAGGAGCCTATGGAACACTCGCCCACTGGTACTAGCAATTCGAATTCTAGTATTCAGAATGTCCACAGCAGCAGCAATAATTCGCCTCCACATTCTACGAGTAGCCATTACAAAAATCCTTATAGCAGTCTGTATACGGGGAAGTCGGGAAGCATCGATCGAAATTCTCGAATGAATCTACCGATTTGGGCAGTACCTGGATTGCCCATACCGCCTCATTCGAATACTGTTCCTAATCAAAATCATCCACACGCTGCGGCCACTGCTGCAGCTGCTATGTTAAGTAGTTGTTACGAAGCCGCGACTGATATGTCTCCTTTGAGGAGAAAAAAGTTGTCGAGTCTTCTGATGAATAGGGACACTCCTATTTTGAGGACTGTTCTAGGACAAGGTCAAGCCGATTCATCGCAACCTGTCAGCTTAGTTTGCCATCCAGACAGTCACGATCAACAATCAAACGGACCGGATCAAGAGCGTATGGAAAAGGTAAATATATTCCCAATATCGCAATCGAGAATACTTGAATCGATTTTGCAGCACTTGAAGAACGAACCCTTGGAAGATGCCCAGTCTCCTTACACGGATTTCACGGTTATGAACGACGAAGAagacaaatcaaaattggcaATTCCGTCCTCTTCCCCCCAATCATATTCGAACGAAATGCGAGCGGTCTCGTCAGGGATCGCCACCTACGTCCCAACCCAGAAACCCGAGTGGAAGCGTTACAAGCAATACACCAGACAAGACATCCTGTCAGCCATCGACGCAGTACGCAACGGAATGTCCGCCCTCCAAGCCGCTCGGAAGTACGGAGTCCCGTCGAGGACCCTCTACGACAAGGTAAAGAAACTGGGAATCACGACGAGTCGGCCGTTTAAGCGAGGCTCGAACGGGAGTCCAGCGTGTTTTCCTTACGGCCTCAGCGGGACAGGATCGCCGTACGGCGGTCACATGTCCGAAACCGACGATCCTCCGACCAACAACAACACGTCCCTCTTGGAAGCGACATTTTTGCAGCACGCCTTCGAAAGCCGCGGAGGAGACGACAGAGAGGCCTTGGCGGCCATGGCGGTTGCGGCGGCTGCTCACGCCGTGGTCTCGGGGCACTCGACGAGTCCCTCGAACCACGGTCACGCGACGAGCCCCAGCCCCAGCCCCACCCTGATGAAGTACATGAGGCAGAACAGTCTGACGCCGTCCCCGGCTCCGGGAAGCGAGCACCACCACAGCGAGACCAACGGGAGCTCCGAACGAGATCGCGACGAAGACGACGACCAAGTGGAGGACCTGTCCGTGGGGAGGAAGCAGGAGTCGCGGGTTATAATGCCTCCGATGAACCAGGTGTCGACGATTATGAAGAAGGAGGAGCTGTTGAAGGACATAATCAAAGAGGAGGGCAGAAGGGAGATTAGCGTCGAGGAGACGGAATAG
Protein Sequence: MCAAQQYCLRWNNHRSNLLTVFDELLQNEAFTDVTLACEGGNPIKCHRMVLAACSPYFQNLFTDLPCKHPVVVLKDVKYTEIKAILEYMYRGEVNVAQDQLAALLKVAEALKVKGLVEENRSSGTSFSCNRDEEPMEHSPTGTSNSNSSIQNVHSSSNNSPPHSTSSHYKNPYSSLYTGKSGSIDRNSRMNLPIWAVPGLPIPPHSNTVPNQNHPHAAATAAAAMLSSCYEAATDMSPLRRKKLSSLLMNRDTPILRTVLGQGQADSSQPVSLVCHPDSHDQQSNGPDQERMEKVNIFPISQSRILESILQHLKNEPLEDAQSPYTDFTVMNDEEDKSKLAIPSSSPQSYSNEMRAVSSGIATYVPTQKPEWKRYKQYTRQDILSAIDAVRNGMSALQAARKYGVPSRTLYDKVKKLGITTSRPFKRGSNGSPACFPYGLSGTGSPYGGHMSETDDPPTNNNTSLLEATFLQHAFESRGGDDREALAAMAVAAAAHAVVSGHSTSPSNHGHATSPSPSPTLMKYMRQNSLTPSPAPGSEHHHSETNGSSERDRDEDDDQVEDLSVGRKQESRVIMPPMNQVSTIMKKEELLKDIIKEEGRREISVEETE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01277622;
90% Identity: iTF_01409879;
80% Identity: iTF_00167722;