Zimm007469.1
Basic Information
- Insect
- Zonitis immaculata
- Gene Symbol
- bab1
- Assembly
- GCA_037414775.1
- Location
- JAZBGX010002218.1:11101-12930[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-15 3.1e-12 45.7 0.1 3 45 356 398 354 398 0.92 2 2 0.17 2.2e+02 1.4 0.5 6 17 468 480 465 481 0.80
Sequence Information
- Coding Sequence
- ATGTGCGCGGCTCAACAATATTGCCTACGTTGGAATAATCATCGTTCGAATTTATTGACTGTTTTCGATGAACTCCTACAAAATGAGGCATTCACCGATGTGACATTAGCATGCGATGGTGGTGGGCCAATTAAATGCCATCGAATGGTATTGGCGGCATGTTCACCATATTTCCAAAATCTCTTTACCGATTTACCATGTAAACatcctgttgttgttttaaaagaTGTAAAATATGGTGAAATTAAAGCAATACTTGAATATATGTATCGGGGTGAAGTTAATGTTGCCCAAGATCAATTAGCAGCATTATTAAAAGTAGCTGAAGCGCTAAAAGTTAAAGGTTTAGTTGAAGAGAACCGTTCAACTGGGACAAGTTTTTCAAGTCGTGAAGATGAACCAATGGATCAATCACCAACTGGCATATCAACAACACATCAAAATGTACACAGCAGTAGTAGTAATCAATCACCGCCACATTCATCGACAAATCCACATTATAAAAGTCCTTATAGTAGTATTTATTCGGGCAAATCTAGTAGTAACAGAGAATCAAGAATGAATTTACCATTATGGGCAGTACCCGGTTTACCAATGCCATCGAATTCTGTTCCTAATCCAAATCATACTAATACAGCAGCAACAGCTGCCGCTATGTTAAGTAGTTGTTATGAAGCAGCCAGTGATATGTCGCCATTGAGaaggaaaaaattatcaagtcttTTAATGAATCGAGATACACCAATTTTGAGGACGGTTCTAGGCCAAGGACAAGCTGACACCTCGCAACCTGTTAGTTTGGTCTGTCATCCGGATAGTCATGAGCAACAATCGAATGGATCCGAACAGGAACGTATTGAAAAAcATATGAAAAACGAACCTTCAGAAGATGCTCAATCACCTTATACTGATTTTACTGTTATGAAcgatgaagaagaaaaatcgaaattagcAATTCCATCATCATTGCCACAATCCTATACGAATGAAATGCGTAGTTCAGGAATTGCAACTTATGTACCAACACAGAAACCGGAATGGAAACGTTACAAACAATATACAAGAAATGATATAATGTCGGCTATCGAAGCTGTCCGAAATGGTATGTCGGCATTACAAGCTGCACGAAAATATGGTGTACCATCACGTACCCTATATGATAAAGTTAAAAAATTAGGAATAACAACTAGTAGACCATTTAAAAGGGGTTCGAATGGTAGTCCAGCATGTTTTCCATATAGTATAAGTGGAACCGGTTCACCATATAGTGGACATTTATCTGAAAATGACGATCcaccaacaaataataataatacatcatTATTGGATGCATCATTTCTACAGCATGCTTTTGAAGGTCGTAGTAGTGATGATCGTGAAACATTAACAGCAATGGCAGTTGCCGCTGCTGCACATGCTGTTGTTTCCGGTCATTCAACAAGTCCACCAAGTCATACAGCAACTAGCCCAAGTCCAAGTCCAACATTAATGAAATATATGCGACAAAATAGTATGACACCATCACCAGCACCTGGTAGTGATCATCAACATAGCGAAACAAATGGTAGTTCAGAACGTGAacgtgatgatgatgacgatcaAGTTGAAGATTTATCAGTTGGTAGTAGAAAACAAGAATCACGTGTTATTATGCCACCGATGAATCAAGTAtcgacaattattaaaaaagaagaattattaaaagataTGATTAAAGAGGAGGCTAGAAGGGAGGTAAGCGTTGATGAAAcggaataa
- Protein Sequence
- MCAAQQYCLRWNNHRSNLLTVFDELLQNEAFTDVTLACDGGGPIKCHRMVLAACSPYFQNLFTDLPCKHPVVVLKDVKYGEIKAILEYMYRGEVNVAQDQLAALLKVAEALKVKGLVEENRSTGTSFSSREDEPMDQSPTGISTTHQNVHSSSSNQSPPHSSTNPHYKSPYSSIYSGKSSSNRESRMNLPLWAVPGLPMPSNSVPNPNHTNTAATAAAMLSSCYEAASDMSPLRRKKLSSLLMNRDTPILRTVLGQGQADTSQPVSLVCHPDSHEQQSNGSEQERIEKHMKNEPSEDAQSPYTDFTVMNDEEEKSKLAIPSSLPQSYTNEMRSSGIATYVPTQKPEWKRYKQYTRNDIMSAIEAVRNGMSALQAARKYGVPSRTLYDKVKKLGITTSRPFKRGSNGSPACFPYSISGTGSPYSGHLSENDDPPTNNNNTSLLDASFLQHAFEGRSSDDRETLTAMAVAAAAHAVVSGHSTSPPSHTATSPSPSPTLMKYMRQNSMTPSPAPGSDHQHSETNGSSERERDDDDDQVEDLSVGSRKQESRVIMPPMNQVSTIIKKEELLKDMIKEEARREVSVDETE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01277622;
- 90% Identity
- iTF_01566349; iTF_00813637; iTF_00814505; iTF_00814322; iTF_00813822; iTF_00987053; iTF_00987241; iTF_01022328; iTF_01022132; iTF_00841947; iTF_00841765; iTF_00929687; iTF_00929495; iTF_01366431; iTF_01366253;
- 80% Identity
- iTF_01566349;