Spec010864.1
Basic Information
- Insect
- Schizotus pectinicornis
- Gene Symbol
- bab2_2
- Assembly
- GCA_951805265.1
- Location
- OX638206.1:10393753-10395581[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-14 8.2e-12 44.8 0.1 2 45 361 404 360 404 0.96 2 2 0.52 3.6e+02 1.1 0.2 6 18 473 486 471 488 0.81
Sequence Information
- Coding Sequence
- ATGTGCGCGGCTCAGCAATATTGTCTCCGATGGAACAACCATCGTTCGAATCTGCTGAACGTCTTTGAGGAACTCCTCCAGAATGAGGCCTTCACCGACGTAACTCTCGCCTGCGAAGGCGGCACAATCAAATGCCACAGAATGGTTTTGGCCGCTTGCTCCCCCTATTTCCAAAACCTCTTCACCGATCTCCCTTGCAAACATCCCGTGGTTGTCCTTAAAGATGTTAAATACGGCGAAATTAAGGCGATTCTCGAATATATGTATCGAGGCGAGGTTAACGTAGCTCAAGACCAACTCGCCGCCTTGCTCAAAGTGGCGGAAGCATTGAAAGTTAAGGGTTTAGTCGAAGAGAATCGGTCGACCGGTAGCAGTTTTTCTAGTAATAGAGAGGATGAACCCATGGACCATTCCCCAACCGGGATTAGCACTTCGAGCGCTCAAAACGTGCACAGTAGTAGCAGCAATACCTCACCGCCTCACTCGTCAAATGCCCACTACAGAAACCCCTATGGTAGCATGTTTCCCGGGAAGTCCGGGAGTATGGATAGGGGATCCAAAATGAATTTGGGTTTGTGGGCGGTGCCAGGGTTATCTATTCCTCCTCATGCTAGTTCTGTTCCTAATCAAACCCACCCCCATTCCGCTTCGACAGCCGCCGCCGCTATGCTAAGTAGTTGCTACGAAGCTGCTAGCGACATGTCGCCGTTGAGGAGGAAGAAACTGTCGAGTCTTCTTATGAACAGGGACACGCCTATTTTGAGAACGGTTCTGGGACAAGGCCAGGTCGAATCCTCTCAACCTGTCAGCTTGGTCTGCCATCCAGACAGTCATGACCAAACCTCGAACGGACCCGACCAGGATCGCCTCGAAAAGCATATGAAGAACGAGCCCTCAGAAGACGCGCAATCTCCTTACACGAACTTCACGGTAATGAACGACGAAGAAGAGAAATCAAAATTGGCAATCCCCTCTTCCTCCCCCCAGTCGTGTTCCAGCGAGATGCGTGGGGTCAGTTCTAGAATTGCAAATTACGTTCCAGCCCAGAAACCTGAATGGAAACGCTACAAGCAATACTCGCGCGACGAAATCATGGCGGCAATAGAAGCGGTGAGAAACGGAATGTCCGCCCTCCAGGCAGCTCGAAATTTCAACGTTCCATCACGTACCCTCTACGATAAAGTCAAGAAGCTTGGCATAACCACGAGTAGGCCTTTCAAGAGAGGCTCCAACGGAAGCCCCGCTTGTTTTCCGTACAGAATGAGCGGAACTAGGTCACCTTACAGCGGTCATTTATCAGAAAGCGACGACCCTCcaacaaacaacaacacgTCATTACTCGAAGCCACTTTCCTCCAGCACGCATTTGAGGGTCGCGGCGGCGACGATAGGGAAGCTTTGGCGGCGATGGCGGTAGCAGCGGCGGCTAATGCCGTGGTTTCCGGACATTCGACGAGTCCTTCGAATCATGGACACGCGACCAGTCCGAGTCCAAGTCCAACTCTAATGAAGTACATGAGGCAAAACAGTATGACGCCGTCTCCTGCGCCTGGAAGCGACCATCATCACAGCGAAACTAACGGCAGCTCGGAGAGGGATCGTGACGAAGAGGACGATCAGGTTGAAGATTTGTCGGTTGGAAGGAAGCACGAATCGCGAGTTATCATGCCTCCGATGAACCAAGTCTCtacgataataaaaaaagaggaACTGTTGAAAGATATCATCAAAGACGAGGCGAGGAGGGAGGTAAGCGTTGAGGAGGCGGAATAA
- Protein Sequence
- MCAAQQYCLRWNNHRSNLLNVFEELLQNEAFTDVTLACEGGTIKCHRMVLAACSPYFQNLFTDLPCKHPVVVLKDVKYGEIKAILEYMYRGEVNVAQDQLAALLKVAEALKVKGLVEENRSTGSSFSSNREDEPMDHSPTGISTSSAQNVHSSSSNTSPPHSSNAHYRNPYGSMFPGKSGSMDRGSKMNLGLWAVPGLSIPPHASSVPNQTHPHSASTAAAAMLSSCYEAASDMSPLRRKKLSSLLMNRDTPILRTVLGQGQVESSQPVSLVCHPDSHDQTSNGPDQDRLEKHMKNEPSEDAQSPYTNFTVMNDEEEKSKLAIPSSSPQSCSSEMRGVSSRIANYVPAQKPEWKRYKQYSRDEIMAAIEAVRNGMSALQAARNFNVPSRTLYDKVKKLGITTSRPFKRGSNGSPACFPYRMSGTRSPYSGHLSESDDPPTNNNTSLLEATFLQHAFEGRGGDDREALAAMAVAAAANAVVSGHSTSPSNHGHATSPSPSPTLMKYMRQNSMTPSPAPGSDHHHSETNGSSERDRDEEDDQVEDLSVGRKHESRVIMPPMNQVSTIIKKEELLKDIIKDEARREVSVEEAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01277622;
- 90% Identity
- iTF_01283298;
- 80% Identity
- iTF_01329913;