Tmol016769.1
Basic Information
- Insect
- Tenebrio molitor
- Gene Symbol
- bab2
- Assembly
- GCA_963966145.1
- Location
- OZ014543.1:10403280-10405107[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-15 1.4e-12 47.7 0.1 1 45 360 404 360 404 0.97 2 2 0.56 2.9e+02 1.9 0.2 6 18 473 486 471 488 0.81
Sequence Information
- Coding Sequence
- ATGTGCGCAGCTCAGCAGTACTGCCTTAGGTGGAACAACCACCGTTCGAATTTACTAACCGTGTTTGACGAACTCCTTCAGAACGAAGCTTTCACCGATGTAACGCTTGCCTGCGAAGGTGGCAATCCTATAAAATGTCATCGAATGGTTCTAGCCGCCTGTTCCCCCTATTTCCAGAACCTCTTTACGGATCTGCCGTGCAAGCATCCCGTCGTGGTATTAAAAGACGTAAAGTACGTCGAAATCAAAGCGATCCTGGAGTACATGTACAGAGGTGAAGTGAACGTTGCCCAGGATCAACTCGCCGCTTTGCTCAAAGTTGCTGAGGCCCTGAAAGTCAAAGGTCTCGTAGAGGAGAATAGATCCAGCGGTACAAGTTTTTCTTGTAATAGAGATGAAGAACCGATGGAGCATTCACCTACTGGGACCAGCAATTCGAATTCTAGTATTCAAAATGTGCACAGCAGCAGCAATAATTCTCCGCCGCATTCTACGAATAATCATTACAAGAGTCCTTATAGTAGTATGTACGGGGGGAAATCTGGGAGTATGGATAGAAACTCTCGAATGAATCTACCCATATGGGCAGTACCTGGTTTGCCCATACCGCCTCATTCTAATACTGTTCCTAATCAAAATCATCCCCATGCTGCAGCTACCGCTGCAGCCGCCATGTTGAGCAGTTGCTACGAAGCTGCTACTGATATGTCTCCACTGAGGCGGAAAAAACTATCCAGTCTCTTGATGAATAGAGACACTCCTATTTTGAGGACTGTTCTAGGACAAGGTCAAGCAGATTCGTCGCAACCTGTCAGCCTAGTTTGTCATCCGGACAGTCATGATCAACAATCGAACGGACCCGAGCGTATGGAAAAGCACTTGAAGAATGAACCCTCCGAAGACGCGCAGTCCCCGTACACGGATTTCACGGTGATGAACGACGaagaagaaaaatcaaaattagcGATTCCGTCCTCTTCTCCCCAATCTTACACCAACGAAATGCGAGCGGTGTCTTCGGGGATTGCGACCTACGTCCCGAATCAAAAACCCGAATGGAAACGGTACAAGCAATACACCAGAGAAGACATTCTGTCGGCGATTGACGCCGTGCGAAACGGTATGTCCGCGCTTCAAGCCGCGCGAAAATACGGAGTCCCGTCGAGGACCCTCTACGACAAGGTGAAGAAGCTCGGCATCACGACGAGTCGGCCGTTCAAGAGGGGGTCCAACGGGAGCCCGGCGTGTTTTCCTTACGGACTGAGCGGGACAGGGTCCCCGTACGGGGGACACATGTCCGAGACCGACGACCCCCCGACCAACAACAATACGTCTCTCCTGGATGCGACCTTCTTGCAGCACGCTTTCGAGAGCCGCGGAGGAGACGATCGGGAGGCTCTGGCGGCGATGGCGGTTGCGGCAGCAGCACACGCCGTGGTCTCGGGTCATTCGACGAGTCCCTCCAACCACGGGCACGCCACGAGCCCCAGTCCGAGTCCCACTTTGATGAAGTACATGCGACAGAACAGTCTGACGCCGTCGCCGGCTCCCGGAAGCGAGCACCATCACAGCGAGACCAACGGGAGCTCCGAGAGGGAGCGCGACGATGACGACGACCAAGTCGAGGATTTGTCGGTCGGGAGGAAGCCGGAATCACGTGTGATAATGCCTCCGATGAATCAGGTGTCGACGATAATGAAGAAGGAGGAGTTGTTGAAAGACATCATCAAGGAGGAGGCCAGGAGGGAGATAAGCGTCGAAGAGGCGGAATAG
- Protein Sequence
- MCAAQQYCLRWNNHRSNLLTVFDELLQNEAFTDVTLACEGGNPIKCHRMVLAACSPYFQNLFTDLPCKHPVVVLKDVKYVEIKAILEYMYRGEVNVAQDQLAALLKVAEALKVKGLVEENRSSGTSFSCNRDEEPMEHSPTGTSNSNSSIQNVHSSSNNSPPHSTNNHYKSPYSSMYGGKSGSMDRNSRMNLPIWAVPGLPIPPHSNTVPNQNHPHAAATAAAAMLSSCYEAATDMSPLRRKKLSSLLMNRDTPILRTVLGQGQADSSQPVSLVCHPDSHDQQSNGPERMEKHLKNEPSEDAQSPYTDFTVMNDEEEKSKLAIPSSSPQSYTNEMRAVSSGIATYVPNQKPEWKRYKQYTREDILSAIDAVRNGMSALQAARKYGVPSRTLYDKVKKLGITTSRPFKRGSNGSPACFPYGLSGTGSPYGGHMSETDDPPTNNNTSLLDATFLQHAFESRGGDDREALAAMAVAAAAHAVVSGHSTSPSNHGHATSPSPSPTLMKYMRQNSLTPSPAPGSEHHHSETNGSSERERDDDDDQVEDLSVGRKPESRVIMPPMNQVSTIMKKEELLKDIIKEEARREISVEEAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01277622;
- 90% Identity
- iTF_01410096; iTF_01567751; iTF_01568133; iTF_00752873; iTF_00752874; iTF_00753082; iTF_00753083; iTF_00167722; iTF_00167590; iTF_01480047; iTF_01480238; iTF_00415217; iTF_00414986; iTF_00870676; iTF_00870484; iTF_01481015; iTF_01480786;
- 80% Identity
- iTF_01410096;