Spla007012.1
Basic Information
- Insect
- Salpingus planirostris
- Gene Symbol
- bab1
- Assembly
- GCA_949788335.1
- Location
- OX460921.1:4071444-4074320[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-14 2e-11 43.4 0.1 1 45 360 404 360 404 0.97
Sequence Information
- Coding Sequence
- ATGTGCGCGGCACAGCAGTACTGCCTCAGGTGGAACAACCACCGTTCGAACCTGCTGGCCGTCTTCGACGAGCTCCTCCAGAACGAGGCCTTCACCGACGTGACGCTCGCCTGCGACGGCGGCAGCCCCATCAAGTGCCACAGGATGGTCCTGGCCGCCTGCTCCCCCTATTTCCAGAACCTCTTCATCGACCTGCCCTGCAAGCACCCGGTGGTCGTCCTCAAAGACGTCAAGCACGCCGAGATCAAGGCCATCCTCGAGTACATGTACCGGGGCGAGGTGAACGTGGCCCAGGACCAGCTTGCCGCCCTGCTCAAAGTGGCCGAGGCCCTCAAAGTCAAAGGGTTGGTCGAGGAGAACCGCTCCAGCTTCTCGAGCAGGGACGACGAACCGATGGACCACTCGCCCAGCGGCATCAGCACCTCGGACCCGCACCAGAGCGTGCACAGCAGCAGCAACCACTCGCCGCCCCACTCGACCAACGCCCACTACAAGAACCCCTACAACAGCATCTACCCGGGCAAGGGGTTGGACCGGGGCTCGAGGATGAATCTGCCCATGTGGGCCGTGCCGGGGCTGCCGATGCCGACGCACCCGAGCGCCGGCCCCAACCAGAGCCACCCCCAttccgccgccaccgccgccgccgccatgCTGAGCAGCTGCTACGAGGCCGCCAGGGACATGTCCTCCTCCATGCCGTCCCCGCTCAAAGGCAAGAAACTGTCCAGCATCTTGATGAACAGGGATACTCCGATTTTGCGTACGGTCCTCGGGCAGGGACAGGCGGATTCTTCGCAACCGGTCAGTCTGGTCTGCCATCCGGACAGCCACGACCAACAGTCCAACGGGTCGGAAGGACGGCTCGAAAAGCACATGAAAAACGAGCCCTCAGAAGACGCCCAGAGCCCCTACTCCAACTTCACCGTGCTGACCGACGAAGACGAAAAATCAAAACTGGCCATACCCTCCTCCTCCCCACAGTCGTACTCGAGCGAAATCGGCCGAGGGGTGAGTTCCGGAATCGCCACCTACGTCCCTTCCCAAAAACCCGAATGGAAACGCTACAAGCAGTACACGCGCGACGACATAATGTCCGCGATCGAAGCCGTCCGGAACGGCATGTCCGCCCTCCAGGCCGCCAGGAAGTACCACGTGCCCTCCCGAACGCTCTACGACAAAGTCAAGAAACTGGGCATAACCACGAGCCGCCCTTTCAAGCGGGGCTCGAACGGCAGCCCCGCTTGCTTCCCGTACGCCCTCAGCGGCACCGGATCGCCTTATGGGTGCCAATCGGAAAACGACGAAACTCCCACGAACAACATAACGTCCCTTCTGGAAGCGACGTTTCTTCAGCACGGGTTCGAAGGGCGCGGGGGCGATGACAGGGAGGCGCTGGCGGCGATGGCGGCGACTGCCGCCGCCCACGCGGCGGCCTCCGGGCACTCCACTAGCCCCCCGAGCCGCGGGCCTACAAGTCCGAGCCCGAGCCCCACGCTCATGAAGTACATGCGGCACGGGAGTTTGACGCCTTCTCCGGCCGCCGGGAGCGACCACCAGCACAGCGAGACCAACGGGAGTTCGGAGCGCGAGCACGAGGACGACGACCAGGTCGAGGACCTGTCGGTGGGGCGGAAGCACCAGGAGTCGCGCGTCATCATGCCGCCCATGAACCAGGTGTCCACGATCGTGAAGAAGGAGGAGCTGCTGAAGGACATGATCAAGGAGGAGGCGCGGAGGGAGGTGAGCGTCGACGAGACCGAGTAG
- Protein Sequence
- MCAAQQYCLRWNNHRSNLLAVFDELLQNEAFTDVTLACDGGSPIKCHRMVLAACSPYFQNLFIDLPCKHPVVVLKDVKHAEIKAILEYMYRGEVNVAQDQLAALLKVAEALKVKGLVEENRSSFSSRDDEPMDHSPSGISTSDPHQSVHSSSNHSPPHSTNAHYKNPYNSIYPGKGLDRGSRMNLPMWAVPGLPMPTHPSAGPNQSHPHSAATAAAAMLSSCYEAARDMSSSMPSPLKGKKLSSILMNRDTPILRTVLGQGQADSSQPVSLVCHPDSHDQQSNGSEGRLEKHMKNEPSEDAQSPYSNFTVLTDEDEKSKLAIPSSSPQSYSSEIGRGVSSGIATYVPSQKPEWKRYKQYTRDDIMSAIEAVRNGMSALQAARKYHVPSRTLYDKVKKLGITTSRPFKRGSNGSPACFPYALSGTGSPYGCQSENDETPTNNITSLLEATFLQHGFEGRGGDDREALAAMAATAAAHAAASGHSTSPPSRGPTSPSPSPTLMKYMRHGSLTPSPAAGSDHQHSETNGSSEREHEDDDQVEDLSVGRKHQESRVIMPPMNQVSTIVKKEELLKDMIKEEARREVSVDETE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01277622;
- 90% Identity
- iTF_01311658;
- 80% Identity
- iTF_01311658;