Eagr016880.1
Basic Information
- Insect
- Eledona agricola
- Gene Symbol
- bab1
- Assembly
- GCA_964023215.1
- Location
- OZ026860.1:15663120-15664902[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2e-15 4.6e-12 45.8 0.1 1 45 350 394 350 394 0.97 2 3 0.1 2.4e+02 1.9 0.2 6 18 463 476 461 478 0.81 3 3 0.64 1.5e+03 -0.6 0.1 28 39 487 498 487 500 0.89
Sequence Information
- Coding Sequence
- ATGTGCGCGGCGCAGCAATACTGTCTCCGGTGGAACAACCACCGCTCAAATCTCCTAACCGTGTTCGACGAGCTCCTCCAGAACGAAGCCTTCACGGACGTGACTCTCGCGTGTGATGGCGGCAGCCCCATCAAGTGCCACCGCATGGTCTTGGCCGCCTGTTCCCCCTATTTCCAAAACCTCTTCACCGACCTGCCATGCAAGCACCCAGTCGTGGTGCTCAAAGACGTCAAGTACGCGGAGATCAAAGCAATTTTGGAATACATGTACCGCGGCGAGGTGAACGTGGCCCAAGACCAGCTCGCCGCATTGCTCAAAGTCGCGGAGGCGCTCAAAGTCAAAGGGCTGGTGGAGGAGAGTAGGTCCAGCAGGACGAGTTTCTCGTGCAAGCGGGAGGACGAGTCCTCGGAGCACTCCCCCACGAGTGTGCAGAACGTGCACAGCAGTAGTAATAACTCCCCGCCGCATTCTACGAACGCGCATTATAAAAGTCCCTACAGCGGCATGTACGTGGGGAAGAACGTCGAGCGGAATTCCAGGATTAATCTGCCGATTTGGGCCGTTCCCGGTCTGCCGATTCCGCCTCACTCCAGCAACGCTCCGAGTCAGAATCATCCACATGCTGCAGCCACGGCGGCGGCGGCGATGCTCAGCAGTTGCTACGAGGCCGCCACTGACATGTCCCCGCTGAAGAGGAAGAAGCTTTCCAGCTTGTTGATGAACAGAGACACGCCGATCTTGAGGACCGTACTGGGTCAGGGCCAAGCTGATTCATCCCAGCCAGTGAGTCTCGTCTGCCATCCCGACAGCCACAACTTGCAGTCGAACGGCCCCCCCGACTTCGAAGGAATGGAAAAGCACTTGAAAAACGAACCTTCCGAAGACGCTCAATCTCCGTACACCGACTTCGCCGTCATGAACGACGACGGAGACAAATCGAAACTGGCAGTTCCGTCCTCGTCGCCTCAATCCTACTCGAACGTGTCCTCGGGCATCGCCACCTACGTCCCCGCACAGAAGCCCGAATGGAAACGTTACAAACAATACACCAGAGAGGACATCCTCTCCGCGATAGACGCCGTCCGTAACGGGATGTCCGCGCTTCAGGCGGCTCGCAAGTACAACGTGCCCTCCCGGACCCTCTACGATAAGGTGAAGAAGCTGGGTATCACCACGAGCCGCCCCTTCAAGAGGGGTTCAAACGGGAGTCCGGCGTGTTTTCCGTACGGTCTGAGCGGAACCGGTTCGCCGTACGGAGGAAACATGTCCGAGAGCGACGAGGCTCCGACCAACAACAACACCTCGCTTCTGGAGGCCACGTTTCTGCAGCACGCGTTCGAAGGTCGAGGCGGCGAAGACAGGGAGGCTCTGGCGGCGATGGCCGTGGCCGCAGCAGCTCACGCCGTCGTCTCCGGCCACTCGACCAGTCCCTCGAACCACGGCCATCCCACGAGCCCCATCCCCAGCCCCACGCTCTTGAAATACATCCGACAGAGCAGTTTGACGCCGAGTCCGGCGGCGGGGAGCGAACATCACCACAGCGAAACGAACGGCAGCTCGGAACGGGAACGCGACGACGACGACCAAGTGGAGGACCTGTCGGTCGGACGGAAGCAGGTTATCATGCCGCCCATGAACCAGGTGTCGACAATAATGAAAAAGGAAGAGTTGTTGAAGGAGATGATAGCGGAGGAGAGTCGGCGAGAGATGGCCGTCGAGGATGCCGAATAA
- Protein Sequence
- MCAAQQYCLRWNNHRSNLLTVFDELLQNEAFTDVTLACDGGSPIKCHRMVLAACSPYFQNLFTDLPCKHPVVVLKDVKYAEIKAILEYMYRGEVNVAQDQLAALLKVAEALKVKGLVEESRSSRTSFSCKREDESSEHSPTSVQNVHSSSNNSPPHSTNAHYKSPYSGMYVGKNVERNSRINLPIWAVPGLPIPPHSSNAPSQNHPHAAATAAAAMLSSCYEAATDMSPLKRKKLSSLLMNRDTPILRTVLGQGQADSSQPVSLVCHPDSHNLQSNGPPDFEGMEKHLKNEPSEDAQSPYTDFAVMNDDGDKSKLAVPSSSPQSYSNVSSGIATYVPAQKPEWKRYKQYTREDILSAIDAVRNGMSALQAARKYNVPSRTLYDKVKKLGITTSRPFKRGSNGSPACFPYGLSGTGSPYGGNMSESDEAPTNNNTSLLEATFLQHAFEGRGGEDREALAAMAVAAAAHAVVSGHSTSPSNHGHPTSPIPSPTLLKYIRQSSLTPSPAAGSEHHHSETNGSSERERDDDDQVEDLSVGRKQVIMPPMNQVSTIMKKEELLKEMIAEESRREMAVEDAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01277622;
- 90% Identity
- iTF_00639646;
- 80% Identity
- iTF_00639646;