Mpro011887.1
Basic Information
- Insect
- Melinopterus prodromus
- Gene Symbol
- -
- Assembly
- GCA_964023965.1
- Location
- OZ030390.1:88174987-88190500[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.8e-11 1.1e-08 36.3 0.0 1 39 285 324 285 328 0.90 2 4 1.7e-12 9.9e-10 39.6 0.1 1 39 339 377 339 380 0.95 3 4 2.1e-18 1.3e-15 58.5 0.0 1 45 394 439 394 439 0.98 4 4 5.3e-16 3.2e-13 50.8 0.0 1 40 446 486 446 490 0.92
Sequence Information
- Coding Sequence
- ATGTCGCTCCTCAAGACGGCAGATcaattgaaaataaaagggCTGTGCGAATCGCCGGAGGAGGACGACGACGCGGCGGACAGTTTCGCATTCGACGGTAGGAAGCACAACAAAATCCGAAGAATCGTCTCGCCGAAGCCACACTACAAAGTAACCGAGAACAGTAGGAAACACAAGTACAGGAGGCCGGAGAGGAGACGATCGCCGGAGAACCAGGAGGACAAGGAGAACAACAACAAGGACAATGCCGCCGTACTGAACAACAATTCGTCCGAAGACGAGAATGAGATGCCAATAGCTTTGGATGAGGAGAGCAGGAAACGAAAGCTGAGCGAATCGCAGACTAAACCCATTAACATGACTAGTCATGGGCCATTGGCGGAACAGACTTTCTCATTCTCTCAGTTCGGAGTGGATAACGATGATTTTCCACCGGAACCGCCGGCTCCGACCGCTATCCCTGTCGGGAACGTAGACATGCATGACCACTCTCCCACTAGAACATTACTCACTAACTCCTCAATGCATAGGACTGATCTATCAGATTCAATCGTTAAGTATGTTGATATTAAAAAGGAGGCGGACATCAAGTTCGAAACGCTGCGAGGATACGACCGCGAACCGTCCATATTGGACATGGAGGCGTCGCAGATGTCCGGAGCCGACCATTCCATGGACAGCCATGATGACACGAAGCCCGAACTTCATACCATGATGATTACCCCGGAATTAATGGGCATGATGCCGCATTCGCTTCAACACGGACTagATTCTGGAGATGCTCATTTGAAGAGTAATGGCCATTCGGATCATTCAGGTGGTAGAGCACATGGTGGGGGGCCGAAGACATGGACACAGGAGGATATGGAACTGGCCTTAGATGCACTTAGAAACCACAATATGAGTTTAACAAAGGCATCAGCAACATATGGAATTCCTTCCACGACGTTATGGCAACGTGCGCATAGGTTAGGTATAGATACTCCGAAAAAAGAAGGTCCAACCAAATCATGGACGGAAGAGAATTTGAATTCTGCGCTGGAAGCGTTACGAACGGGAACTATTTCGGCGAACAAGGCCAGTAAAGCCTATGGTATCCCTAGCAGTACTCTGTATAAAATTGCGAGGCGGGAAGGAATTCGACTGGCGGCTCCCTTCAATGCTGCACCCACCACCTGGACTCCGGAAGATCTGGAAAAAGCTTTGGAATCTATTCGCTCTGGACAGACGTCTGTTCAAAAAGCATCGACTGAATTTGGAATTCCAACGGGTACGCTTTATGGACGATGTAAGAGAGAGGGTATCGAGTTGTCAAGGTCAAATCCAACGCCATGGTCGGAAGATGCCATGGGCGAGGCGTTAGAAGCTGTGAGATTAGGTCATATGTCAATAAACCAAGCTGCCATACACTACAATTTACCATACTCATCACTTTACGGCCGGTTCAAGCGAGGCATAAAGTATGAAACCGACAACATAGACGCAAACTCGGACAGCCAGTCTCATCTAGATGCTCAATCGCATATGATGGATTACTCCAACTCCCATCAGCAGATTCAGTATCAGCAGCATCCATCGAACAGCTGA
- Protein Sequence
- MSLLKTADQLKIKGLCESPEEDDDAADSFAFDGRKHNKIRRIVSPKPHYKVTENSRKHKYRRPERRRSPENQEDKENNNKDNAAVLNNNSSEDENEMPIALDEESRKRKLSESQTKPINMTSHGPLAEQTFSFSQFGVDNDDFPPEPPAPTAIPVGNVDMHDHSPTRTLLTNSSMHRTDLSDSIVKYVDIKKEADIKFETLRGYDREPSILDMEASQMSGADHSMDSHDDTKPELHTMMITPELMGMMPHSLQHGLDSGDAHLKSNGHSDHSGGRAHGGGPKTWTQEDMELALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRSGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGIKYETDNIDANSDSQSHLDAQSHMMDYSNSHQQIQYQQHPSNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00137831; iTF_00956226; iTF_01120967; iTF_01120787; iTF_00956411; iTF_00433957; iTF_01252616; iTF_01098411; iTF_01097346; iTF_01098612; iTF_01123598; iTF_00307489; iTF_00137106; iTF_00136753; iTF_01498999; iTF_01498797; iTF_00740732; iTF_01258206; iTF_01257885; iTF_00465907; iTF_00464578; iTF_00465076; iTF_00466523; iTF_00626975;
- 90% Identity
- iTF_00137831; iTF_00137106; iTF_00136753;
- 80% Identity
- -