Caur005874.1
Basic Information
- Insect
- Cetonia aurata
- Gene Symbol
- -
- Assembly
- GCA_949128085.1
- Location
- OX421882.1:45350732-45367890[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1e-09 1.5e-07 32.6 0.0 1 39 335 374 335 378 0.90 2 4 1.2e-11 1.8e-09 38.7 0.2 1 39 389 427 389 430 0.95 3 4 9.1e-18 1.4e-15 58.3 0.0 1 45 444 489 444 489 0.98 4 4 2.3e-15 3.4e-13 50.7 0.0 1 40 496 536 496 540 0.92
Sequence Information
- Coding Sequence
- ATGGAATATTTCCAACAAACTGAAATTGGTAAATATCTCCAATACATTTTTGGCCTTCCATTTTTGGAACCAACTGCTGTGGGGGATTGCTTCGCCTTAGACTTCGCCGAAATTCAACCCGACAACAAGAAAGTTAGCGATTTTGCGGATTATCTGTCTCTTTTAAAAACGGCAGATCAACTGAAAATAAAAGGTCTCTGCGAATCCCCAGAAGAGAAGGACACTCCGGACGAATCCTCAGAGTTTACATTCGGGGGCAGAGGCCATCCAGCAAAGGTCCGAAAAATATCATCGCCCAAACATCTAAAAGGAACGGAGAATAATAGGAAACACAAATACAGGAAACCTGAGAGGAGAAAGTCGCCGGATCAAGAAGACAAAGAGAACAAGGACGCCGTTCTAGAGAATCATACGTCAGACGAAGAAAATGACATGCCAGTAGCTTTAGACGAGGAAAGTCGAAAACGAAAACTGAGCGAAACAATAAGTAAACCAATTAACATGACCAGCCATGGTCCACTGGCAGAGCAGACTTTCTCATTCTCTCAGTTCGGTGTGGATAACGATGACTTTCCACCAGAACCACAGGCGCCAAGAGCCATTCCCGTAGGAAATATAGAAATGCACGAACACTCACCCACCAGAACGTTACTAACAAACTCTTCAATACATAGGACAGACTTATCAGATTCACACAAATTCACGTccgaaataaagaaagaaatcatCGACATAAAATTCGAAACGCTGCGATCATACGATGGCGAACAGTCCATTTTGGACATGGAAGCCTCTCGATTGTCAGGTCCCGATCATTCCATGGATAGTCACGAGGATAACGAGCATGGAATGCACACGATGATGATCACGCCTGACATGATGGGAATGATGCCGGGATCTGGCCTCCACGCGTTAGATTCGAATTGTGGGGAACTGTCTCTGAAGAGCAACGGTCATACAGAGCATACCAGCGGTAGGCATGGAGGTGGACCAAAGACATGGACGCAAGAGGATATGGAATTAGCTTTAGATGCCTTAAAAAATCATAATATGAGTTTAACTAAGGCTTCCGCCACCTACGGCATTCCTTCAACAACATTATGGCAAAGAGCTCATCGACTAGGAATAGATACCCCAAAAAAAGAAGGTCCAACGAAATCATGGACGGAAGAAAGTCTGAATTCCGCCCTAGAAGCGCTTAGAACTGGAACGATATCCGCCAATAAAGCCAGTAAAGCATACGGCATACCCAGCAGTACCTTGTATAAGATAGCCAGACGAGAAGGAATTCGACTTGCGGCACCATTCAATGCTGCGCCTACGACGTGGACACCGGAAGACCTCGAGAAAGCCTTAGAATCCATACGCTCTGGTCAAACGTCGGTACAGAAAGCCTCCACAGAATTCGGAATACCCACTGGAACCTTATATGGCAGATGCAAAAGAGAAGGTATAGAGCTCTCGAGATCGAATCCAACTCCATGGTCTGAGGATGCAATGGGGGAAGCGTTGGAAGCAGTCAGATTAGGCCACATGTCCATAAATCAAGCTGCAATACACTACAACCTACCATACTCATCTCTATACGGACGATTTAAACGAGGCATTAAATACGAAACGGAAGCATTGGACGCAAATTCGGATAGTCAGTCACATTTAGACAGCCAAATTCACATGATGGAATATTCTACAAATTCACACCAGCAAATGCCCTATCAGCAACATCCATCGAATagctga
- Protein Sequence
- MEYFQQTEIGKYLQYIFGLPFLEPTAVGDCFALDFAEIQPDNKKVSDFADYLSLLKTADQLKIKGLCESPEEKDTPDESSEFTFGGRGHPAKVRKISSPKHLKGTENNRKHKYRKPERRKSPDQEDKENKDAVLENHTSDEENDMPVALDEESRKRKLSETISKPINMTSHGPLAEQTFSFSQFGVDNDDFPPEPQAPRAIPVGNIEMHEHSPTRTLLTNSSIHRTDLSDSHKFTSEIKKEIIDIKFETLRSYDGEQSILDMEASRLSGPDHSMDSHEDNEHGMHTMMITPDMMGMMPGSGLHALDSNCGELSLKSNGHTEHTSGRHGGGPKTWTQEDMELALDALKNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEESLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRSGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGIKYETEALDANSDSQSHLDSQIHMMEYSTNSHQQMPYQQHPSNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00980857;
- 90% Identity
- iTF_01123598;
- 80% Identity
- -