Osag006232.1
Basic Information
- Insect
- Onthophagus sagittarius
- Gene Symbol
- -
- Assembly
- GCA_036711965.1
- Location
- JASERS010000001.1:91526430-91545436[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 7e-12 1e-08 36.2 0.0 1 39 328 367 328 371 0.90 2 4 1.1e-12 1.6e-09 38.8 0.2 1 39 382 420 382 423 0.95 3 4 8.3e-19 1.2e-15 58.4 0.0 1 45 437 482 437 482 0.98 4 4 2.3e-16 3.3e-13 50.5 0.0 1 39 489 528 489 532 0.93
Sequence Information
- Coding Sequence
- ATGAAGCAGAATAGAACGATTTATTGTTTGCAAGACATATTTCGAGAGTCTCGACTCTCTTCTTTGTCTCCACAGATAACATTACACTCATCAtCGTTATTAAAAACAGCGGatcaactaaaaataaaagGTTTGTGCGAGAATCCGGACGAGAACGAGGACGTCGAATCGAGCTTCGCGTTCGAAGGAAGAAGACACAAAATACGACGGATCGGATCTCCTAAGCCGCAACACAACAAATCCGTAACGGAAAGCAACAACAGGAAACACAAGCAGAAACGGGCGGAAAGGCGGAAATCGCAGGATAAGGACGATAAGGAAAATTGCAATAAAGAGAATAACACGGAAAATACCGGTAAAGATGAAGTGAATAACGACGTCGGTTCGGACGAGGAAAATGAGATGCCAATTGCCTTAGACGAGGAGAGTAAGAAGAGGAAACTTACGGAGAGTGAAGAGACCCGCGTTAATATGACTAGTCATGGACCGTTACCTGAACAAACTTTCTCGTTCTCTCAGTTCGGAGTGGATAACGATGATTTCCCACCAGAGCCGCTGGCACCGACTGCTATCCCGGTCGGAAACGTAGACATGCATGACCACTCTCCCACTAGAACATTGCTGACTAACTCTTCAATCGATAGGACTGACCTATCagATTCGACCGTAAAATATTGCGACATCAAAAAAGAATCTAGcagtattaatattaaattggaGGCTCTTCAATCGTACGATGACGACCAATCTTTATTGGAAATGGATGGGAGTCGGATATCGGGGCATGATCACTCAATGGATAGCGTAGATGAGGGGAAACCTGAGTTACACACGATGATGATAACCCCCGAGTTATTAGGGATGATGCCCCCGACGGGACCTCATGGATTAgATTGTAGTTTAGATTCCTCCTCAATAAAAAGTAACGGCCATTCGGATCATCCTTCGGGACGGGGACACGGTGGCGGGCCAAAAACTTGGACGCAAGAAGACATGGAATTAGCTTTAGACGCCCTCAGAAACCACAATATGAGCCTAACAAAAGCATCCGCAACTTACGGAATCCCATCGACGACGTTATGGCAACGAGCCCATCGATTGGGGATAGACACCCCGAAAAAGGAGGGTCCGACGAAATCCTGGACGGAGGAAAGTTTAAATTCCGCGCTGGAGGCTTTAAGAACAGGAACGATTTCCGCGAATAAAGCCAGTAAAGCTTACGGTATTCCGAGCAGCACCTTGTACAAAATAGCGCGGAGAGAAGGGATCCGATTGGCCGCACCGTTTAACGCGGCGCCCACGACGTGGACCCCGGAAGATTTAGAAAAAGCTTTAGAATCCATAAGATCTGGCCAAACGTCCGTGCAGAAAGCTTCGACCGAATTTGGGATTCCAACGGGGACGTTATACGGAAGGTGTAAAAGGGAAGGGATCGAATTAAGTAGATCTAATCCTACGCCTTGGTCTGAAGATGCTATGGGCGAAGCGTTAGAAGCAGTCAGATTGGGCCACATGTCGATTAACCAAGCTGCAATTCACTACAACCTCCCATACTCGTCATTATACGGCCGATTTAAAAGGGGAATTAAATACGAGGCTGAATGCATAGACGGAAATTCGGATAGTCAATCAAACTTGGATGCTCAAAGTCACATGATGGAGTACAGTAATAATTCGCACCATCAAATACAGTACCAACATCACCCGCCAAATAGCTGA
- Protein Sequence
- MKQNRTIYCLQDIFRESRLSSLSPQITLHSSSLLKTADQLKIKGLCENPDENEDVESSFAFEGRRHKIRRIGSPKPQHNKSVTESNNRKHKQKRAERRKSQDKDDKENCNKENNTENTGKDEVNNDVGSDEENEMPIALDEESKKRKLTESEETRVNMTSHGPLPEQTFSFSQFGVDNDDFPPEPLAPTAIPVGNVDMHDHSPTRTLLTNSSIDRTDLSDSTVKYCDIKKESSSINIKLEALQSYDDDQSLLEMDGSRISGHDHSMDSVDEGKPELHTMMITPELLGMMPPTGPHGLDCSLDSSSIKSNGHSDHPSGRGHGGGPKTWTQEDMELALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEESLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRSGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGIKYEAECIDGNSDSQSNLDAQSHMMEYSNNSHHQIQYQHHPPNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00980857;
- 90% Identity
- iTF_01098411;
- 80% Identity
- -