Basic Information

Insect: Oryctes borbonicus
Gene Symbol: bab1
Assembly: GCA_902654985.1
Location: LR736857.1:21530478-21598465[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 3.2e-11 5.2e-08 32.5 0.0 1 39 376 415 376 419 0.90

2 4 3.8e-13 6.3e-10 38.6 0.2 1 39 430 468 430 471 0.95

3 4 2.9e-19 4.7e-16 58.2 0.0 1 45 485 530 485 530 0.98

4 4 7.8e-16 1.3e-12 47.2 0.0 1 40 537 577 537 581 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	3.2e-11	5.2e-08	32.5	0.0	1	39	376	415	376	419	0.90
2	4	3.8e-13	6.3e-10	38.6	0.2	1	39	430	468	430	471	0.95
3	4	2.9e-19	4.7e-16	58.2	0.0	1	45	485	530	485	530	0.98
4	4	7.8e-16	1.3e-12	47.2	0.0	1	40	537	577	537	581	0.92

Sequence Information

Coding Sequence: ATGTCCAGTCAGCATTACTGCCTTCGATGGAACAATTACCAGAGCAATATGACCACAGTATTTCATCAACTTCTACAGAATGAAGCGTTTGTCGATGTCACATTAGCATGCAATGATTTGTCGTTGAAGGCTCATAAGGTAGTTCTGTCCGCGTGCTCTTCTTACTTTCAAAAACTTCTCCTGGAGAATCCATGTAAGCATCCCACGATAATAATGCCGCAAGACATCTGCTATGCCGATCTGAAATTCATCATTGAATTCGTATACAAAGGAGAAATCGATGTTTCCCAAGCAGAACTACAGTCGCTACTAAAAACGGCAGATCAACTCAAAATAAAAGGTCTTTGCGAATCACCAGAAGAAAAGGAGAAAACGGACCTCCCACCAGATTTCACATTTGGAGGCAGAGGCTATTCAAAACTACGTAAATTATCCTCACCTAAACAGTTCAAATCAACAGAAAATAACAGAAAGCACAAATACAGGAAGCCCGAACGAAGACGATCGCCAGATTTagagaataaagaaaacaaagacgCTGCTTCTGTAAATCATTCGTCAGATGAAGAAAATGACATGCCAGTAGCTTTGGACGAAGAAAGTCGGAAAAGAAAAGTTAACGAAACCACAAGTAAACCGATTAACATGACTAGTCATGGACCGCTGGCAGAACAgTTCGGTGTGGATAACGATGACTTTCCACCAGAACCACCGGCGCCAACAGCCATTCCCGTAGGAAATATAGAAATGCACGAACACTCACCCACCAGAACGTTACTAacaaattcttcaatacacaGGACAGACTTATCAGATTCGCACAAATTTACCACagacataaaaaaagaaatcgatataAAGTTCGAAACGCTACGATCTTACGATGGAGAGCAATCGATTCTGGATATGGAAGCCACTCGCATGTCTGGCGCAGATCATTCTATGGACAGTCATGAGGATAACGAACAAGGAATGCACACAATGATGATAACCCCTGATATGATGGGTATGATGCCTGGATCTGGTCCTCATACGTTAGATTCTAATTGTGGGGACCTATCTTTAAAAAGTAATGGCCATACAGAGCATGGTGCAAGTAGACACGGAGGAGGACCTAAAACATGGACCCAAGAAGACATGGAATTAGCACTAGATGCcttaaaaaatcacaatatGAGCTTAACAAagGCTTCCGCGACTTATGGCATACCTTCCACTACATTGTGGCAAAGAGCTCACAGGTTAGGTATAGATACGCCTAAAAAAGAAGGACCCACTAAGTCATGGACGGAGGAGAGTTTAAATTCTGCACTGGAAGCGCTAAGAACGGGCACAATATCTGCCAATAAAGCTAGTAAAGCTTATGGTATACCTAGCAgtactttatataaaatagcgAGGAGAGAAGGCATTCGATTAGCAGCTCCATTTAATGCAGCGCCTACGACGTGGACGCCAGAAGACCTAGAAAAAGCCTTAGAATCGATTAGATCCGGCCAAACGTCAGTACAAAAAGCGTCGACAGAATTTGGTATACCCACAGGCACGCTTTATGGAAGATGTAAGCGTGAAGGTATTGAACTTTCTAGGTCCAATCCTACGCCTTGGTCCGAAGATGCGATGGGCGATGCTTTAGAAGCAGTCAGATTGGGCCACATGTCCATTAATCAGGCTGCGATACACTACAATTTACCATATTCTTCTTTGTACGGAAGGTTTAAACGAGGTATAAAATACGAAACCGAAAATTTGGATACGAACTCAGACAGTCAGTCACATTTAGATGCGCAAGTTCATATGATGGATTACTCGACGAACTCACATCAGCAAATTAGCTACCAACAACACCCGCCGAATAGCTGA
Protein Sequence: MSSQHYCLRWNNYQSNMTTVFHQLLQNEAFVDVTLACNDLSLKAHKVVLSACSSYFQKLLLENPCKHPTIIMPQDICYADLKFIIEFVYKGEIDVSQAELQSLLKTADQLKIKGLCESPEEKEKTDLPPDFTFGGRGYSKLRKLSSPKQFKSTENNRKHKYRKPERRRSPDLENKENKDAASVNHSSDEENDMPVALDEESRKRKVNETTSKPINMTSHGPLAEQFGVDNDDFPPEPPAPTAIPVGNIEMHEHSPTRTLLTNSSIHRTDLSDSHKFTTDIKKEIDIKFETLRSYDGEQSILDMEATRMSGADHSMDSHEDNEQGMHTMMITPDMMGMMPGSGPHTLDSNCGDLSLKSNGHTEHGASRHGGGPKTWTQEDMELALDALKNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEESLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRSGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGDALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGIKYETENLDTNSDSQSHLDAQVHMMDYSTNSHQQISYQQHPPNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00980857;
90% Identity: iTF_00433957;
80% Identity: iTF_01120967;