Otau001087.1
Basic Information
- Insect
- Onthophagus taurus
- Gene Symbol
- bab2
- Assembly
- GCA_000648695.2
- Location
- NW:388400-442838[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.5e-12 3.2e-09 36.0 0.0 1 39 399 438 399 442 0.90 2 4 4e-13 5e-10 38.6 0.2 1 39 453 491 453 494 0.95 3 4 3e-19 3.8e-16 58.2 0.0 1 45 508 553 508 553 0.98 4 4 8.3e-17 1e-13 50.3 0.0 1 39 560 599 560 603 0.93
Sequence Information
- Coding Sequence
- ATGTCCGGAGGGCAACATTATTGCCTACGATGGAACAATTACCAAAGCAACATGACGAGCGTGTTTCACCAGCTGCTGCAAAATGAGGCCTTCGTTGACGTGACCTTGGCGTGTAATGACCTTTCGCTGAAAGCCCATAAGGTGGTTCTTTCAGCTTGTTctgcatattttcaaaagctCCTATTAGAAAACCCCTGTAAACACCCAACAATCATAATGCCACAAGACGTCTGTTACGCAGATCTGAAATTTATCATCGAGTTCGTGTACAAAGGAGAAATCGATGTTTCGCAGGCGGAATTACAGTCATTACTAAAAACAGCAGatcaacttaaaataaaaggtTTGTGTGAAAATCCGGACGAGAACGAAGATATCGAATCGAGCTTCGCGTTCGAAGGAAGAAGACATAAAATACGACGGATCGGATCTCCTAAACCGCAACATAACAAATCCGTAACGGAAAACAACAACAGGAAACACAAACAGAAAAGGTCGGAAAGGCGGAAATCGCAGGATAAAGAcgataaagaaaattgtaataaagaaaacaatacaGAAAATACCGGTAAAGATGAAGTGAATAACGACGTTGGTTCGGACGAGGAAAATGAGATGCCAATTGCCTTAGACGAAGAGAGTAAGAAGAGGAAACTTACAGAGAGCGAAGAGACCCGCGTTAATATGACTAGTCATGGACCGTTACCTGAACAAACTTTCTCGTTCTCTCAGTTCGGAGTGGATAACGATGATTTCCCACCAGAGCCGCTGGCACCGACTGCTATCCCGGTCGGAAACGTAGACATGCATGACCACTCTCCCACTAGAACATTGCTGACTAACTCTTCAATCGATAGGACTGACCTATCagATTCCACCGTGAAATATTgcgatattaaaaaagaatctagtagtattaatattaaattggaGGCTCTTCAATCGTACGATGATGATCAATCTTTATTGGAAATGGATAGTAGTCGAATATCGGGTCATGATCATTCCATGGATAGTGTGGATGAGGGAAAACCTGAATTACACACGATGATGATAACACCCGAATTATTAGGGATGATGCCACCAACAGGTCCTCATGGATTagATTGTAGTTTAGATTCTTCCTCAATAAAAAGTAACGGCCATTCGGATCATCCTTCAGGACGGGGACACGGCGGTGGGCCAAAAACATGGACTCAAGAAGACATGGAATTAGCTTTAGACGCGTTGAGAAACCACAATATGAGTTTAACGAAAGCATCGGCAACTTACGGAATCCCATCGACGACGTTATGGCAACGAGCTCATCGATTGGGAATAGATACCCCTAAAAAGGAAGGTCCGACGAAATCCTGGACGGAGGAAAGTTTAAATTCCGCACTGGAAGCTTTAAGAACGGGAACGATTTCCGCGAATAAAGCCAGTAAAGCTTACGGTATTCCAAGCAGCACCTTGTACAAAATAGCACGGAGAGAAGGGATACGATTGGCGGCGCCGTTTAATGCGGCACCTACAACATGGACCCCGGAAGATTTAGAAAAAGCTTTAGAATCCATAAGATCTGGGCAAACGTCCGTGCAGAAAGCTTCGACTGAATTTGGGATTCCAACGGGGACGTTATACGGAAGGTGTAAAAGAGAAGGGATCGAATTAAGTAGGTCTAATCCTACACCTTGGTCTGAAGACGCTATGGGCGAAGCGTTAGAAGCAGTCAGATTGGGTCACATGTCGATTAATCAAGCAGCGATTCATTATAACCTGCCGTATTCGTCGTTATATGGCCGATTTAAAAGGGGGATTAAATACGAAGCTGAATGCATAGATGGAAATTCGGATAGTCAATCAAACTTGGATGCTCAAAGTCACATGATGGAGTACAGTAATAACTCGCACCATCAAATACAGTACCAACATCATCCGCCAAATAGCTGA
- Protein Sequence
- MSGGQHYCLRWNNYQSNMTSVFHQLLQNEAFVDVTLACNDLSLKAHKVVLSACSAYFQKLLLENPCKHPTIIMPQDVCYADLKFIIEFVYKGEIDVSQAELQSLLKTADQLKIKGLCENPDENEDIESSFAFEGRRHKIRRIGSPKPQHNKSVTENNNRKHKQKRSERRKSQDKDDKENCNKENNTENTGKDEVNNDVGSDEENEMPIALDEESKKRKLTESEETRVNMTSHGPLPEQTFSFSQFGVDNDDFPPEPLAPTAIPVGNVDMHDHSPTRTLLTNSSIDRTDLSDSTVKYCDIKKESSSINIKLEALQSYDDDQSLLEMDSSRISGHDHSMDSVDEGKPELHTMMITPELLGMMPPTGPHGLDCSLDSSSIKSNGHSDHPSGRGHGGGPKTWTQEDMELALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEESLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRSGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGIKYEAECIDGNSDSQSNLDAQSHMMEYSNNSHHQIQYQHHPPNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00980857;
- 90% Identity
- iTF_01097346; iTF_01098612;
- 80% Identity
- iTF_01098612;