Oere091102.1
Basic Information
- Insect
- Osmoderma eremita
- Gene Symbol
- -
- Assembly
- GCA_031763485.1
- Location
- JARFOC010111144.1:2542-11643[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.6e-10 2.2e-07 32.8 0.0 1 39 282 321 282 325 0.90 2 4 1.9e-12 2.6e-09 38.9 0.2 1 39 336 374 336 377 0.95 3 4 1.4e-18 1.9e-15 58.5 0.0 1 45 391 436 391 436 0.98 4 4 3.5e-16 4.9e-13 50.8 0.0 1 40 443 483 443 487 0.92
Sequence Information
- Coding Sequence
- TCTCTTTTAAAAACGGCAGATCAACTGAAAATAAAAGGTCTCTGCGAGGCCCCAGAAGAGAAGGACAGCCCGGAGGAATCCTCAGAGTTCTCATTCGGGGGCAGAGGCCATTCAGCAAAGATCCGCAAAATATCATCGCCCAAACATCTAAAAGCAACTGAGAACAACAGGAAACACAAATACAGGAAACCTGAAAGAAGAAAGTCACCGGATCAAGAagacaaagaaaacaaagacgCTGCTCTAGGAAATAATACGTCAGACGAAGAAAATGACATGCCAGTAGCTTTGGATGAGGAAAGTCGAAAACGAAAAACAAGCGAAACTATAAGTAAACCGATGAACATGACCAGTCATGGCCCGCTGGCCGAACAGACTTTCTCATTCTCTCAGTTCGGTGTGGATAACGATGACTTTCCACCAGAACCACAGGCGCCAAGAGCCATTCCCGTAGGAAATATAGAAATGCACGAACACTCACCCACCAGAACGTTACTAACAAATTCTTCAATACATAGGACAGACTTATCAGATTCGCATAAATTTACCTcggaaataaagaaagaaatcatCGATATAAAGTTCGAAACCCTGCGATCGTACGATGGCGAACAATCACTTTTAGACATGGAAGCCTCCCGACTGTCAGGTGCAGATCATTCCATGGACAGTCACGAAGATAACGAGCACGGGATGCACACGATGATGATAACTCCTGATATGATGGGAATGATGCCAGGATCGGGCCATCACGCATTAGATTCTAATTGTGGGGAATTGTCTCTAAAGAACAACGGTCATACAGAGCACGCCGGCAGGCATGGAGGAGGACCCAAAACATGGACTCAAGAGGATATGGAACTAGCATTAGACGCCTTAAAAAATCATAACATGAGCTTAACTAagGCTTCCGCGACCTACGGCATTCCATCTACAACCTTATGGCAAAGAGCGCATCGACTGGGAATAGATACACCGAAAAAAGAAGGTCCTACGAAATCGTGGACAGAAGAGAGTCTCAATTCCGCCTTAGAAGCTCTTAGAACGGGGACGATATCTGCCAACAAAGCCAGCAAAGCTTACGGCATACCCAGCAGTACCTTGTATAAAATAGCCAGGCGAGAAGGAATTCGACTTGCCGCACCATTCAACGCAGCCCCTACGACGTGGACGCCAGAGGACTTGGAAAAGGCCTTGGAATCCATACGATCTGGTCAGACGTCGGTACAGAAAGCTTCGACAGAATTTGGTATACCTACTGGAACACTATATGGCAGATGCAAAAGGGAAGGTATAGAGCTCTCGAGATCAAATCCGACCCCATGGTCTGAAGATGCGATGGGAGAAGCTTTAGAAGCAGTAAGATTGGGCCACATGTCTATAAATCAAGCAGCAATCCATTATAACCTACCGTACTCGTCTCTGTATGGAAGATTCAAAAGAGGTATTAAATACGAAACGGAGGCTTTGGACGCGAATTCGGACAGCCAATCAAATTTAGACACGCAAATTCATATGATGGAGTATTCTACAAATTCACACCAACAGATGACCTATCAACAACATCCGCCGAATAGCTGA
- Protein Sequence
- SLLKTADQLKIKGLCEAPEEKDSPEESSEFSFGGRGHSAKIRKISSPKHLKATENNRKHKYRKPERRKSPDQEDKENKDAALGNNTSDEENDMPVALDEESRKRKTSETISKPMNMTSHGPLAEQTFSFSQFGVDNDDFPPEPQAPRAIPVGNIEMHEHSPTRTLLTNSSIHRTDLSDSHKFTSEIKKEIIDIKFETLRSYDGEQSLLDMEASRLSGADHSMDSHEDNEHGMHTMMITPDMMGMMPGSGHHALDSNCGELSLKNNGHTEHAGRHGGGPKTWTQEDMELALDALKNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEESLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRSGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGIKYETEALDANSDSQSNLDTQIHMMEYSTNSHQQMTYQQHPPNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00980857;
- 90% Identity
- iTF_00307489;
- 80% Identity
- -