Dtit022309.1
Basic Information
- Insect
- Dynastes tityus
- Gene Symbol
- -
- Assembly
- GCA_029618875.2
- Location
- JAROYD020000005.1:4008694-4024610[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.5e-10 1.3e-07 32.8 0.0 1 39 294 333 294 337 0.90 2 4 5.4e-12 1.6e-09 39.0 0.2 1 39 348 386 348 389 0.95 3 4 4e-18 1.2e-15 58.6 0.0 1 45 403 448 403 448 0.98 4 4 0.28 83 4.6 0.0 1 13 455 467 455 471 0.90
Sequence Information
- Coding Sequence
- ATGTACAATAGTCTACCAAGACCTCCAGATGACATGAAATCTCTACTAAAAACGGCAGATCAACTCAAAATAAAAGGCCTTTGCGAATCACCAGAAGAAAAGGAGAAAACGGACCATCCACCAGATTTCACATTTGGAGGCAAAGGCTATTCGAAGCTACGTAAATTATCCTCACCTAAACAGTTCAAATCAACAGAAAATAACAGAAAGCACAAATACAGAAAACCCGAACGAAGACGATCGCCAGATCTAgagaataaagaaaacaaagacgCTACTTCTGTAAATCATTCGTCAGATGAAGAAAATGACATGCCAGTAGCTTTGGACGAAGAAAGTCGGAAAAGAAAACTTAGCGAAACCACGAGTAAAGCGATTAACATGACTAGTCATGGACCGCTGGCAGAACAGACTTTCTCATTCTCTCAGTTCGGTGTGGATAACGATGACTTTCCACCAGAACCACCAGCGCCAACAGCCATTCCTGTAGGAAATATAGAAATGCACGAACACTCGCCCACCAGAACGTTACTAACAAATTCTTCAATACACAGGACAGACTTATCAGATTCGCACAAATTTACCACagacataaaaaaagaaatcgatatAAAGTTCGAAACGCTGCGATCGTACGATGGAGAGCAATCGATTTTGGACATGGAAGCCACTCGCATGTCTGGCGCTGACCATTCTATGGACAGTCATGAGGATAACGAACAAGGAATGCACACGATGATGATAACCCCTGATATGATGGGTATCATGCCTGGATCTGGCCCTCATACATTAGATTCTAATTGTGGGGATCTATCTTTAAAAAGTAATGGCCATACGGAGCACGGCGCAGGTAGACACGGAGGAGGACCCAAAACGTGGACCCAGGAAGATATGGAACTAGCACTAGATGCCTTAAAAAATCACAATATGAGTTTGACAAAGGCTTCCGCAACTTATGGCATACCTTCCACTACTTTGTGGCAAAGAGCTCACAGGTTAGGTATAGACACGCCTAAAAAAGAGGGACCCACTAAGTCATGGACGGAGGAGAGTCTAAATTCTGCATTGGAAGCGCTAAGAACGGGGACAATATCTGCCAATAAAGCTAGTAAAGCTTATGGTATACCTAGCAGTACTTTATATAAAATAGCGAGGCGAGAGGGTATTCGATTAGCTGCCCCGTTTAATGCGGCGCCTACAACGTGGACGCCAGAGGACCTAGAAAAAGCCTTAGAATCGATTAGATCCGGCCAAACGTCAGTACAAAAAGCATCGACAGAATTTGGTATACCTACAGGCACGCTTTATGGAAGATGTAAGCGTGAAGGTATTGAACTTTCCAGGTCAAATCCTACGCCCTGGTCCGAAGATGCGATGGGCGAAGCTTTAGAAGCAGTCAGGCCATTGTCCAATGTACATTGGTTTCCGGACTACAACAGCATAGGCTTTTACATTTGGTGTTGCATGTCAACAGTTTACCTAAACCTCGAAGCAGTATGCAGCGCCAAACGTAGCAACCTAGAGAAAGTCTGA
- Protein Sequence
- MYNSLPRPPDDMKSLLKTADQLKIKGLCESPEEKEKTDHPPDFTFGGKGYSKLRKLSSPKQFKSTENNRKHKYRKPERRRSPDLENKENKDATSVNHSSDEENDMPVALDEESRKRKLSETTSKAINMTSHGPLAEQTFSFSQFGVDNDDFPPEPPAPTAIPVGNIEMHEHSPTRTLLTNSSIHRTDLSDSHKFTTDIKKEIDIKFETLRSYDGEQSILDMEATRMSGADHSMDSHEDNEQGMHTMMITPDMMGIMPGSGPHTLDSNCGDLSLKSNGHTEHGAGRHGGGPKTWTQEDMELALDALKNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEESLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRSGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRPLSNVHWFPDYNSIGFYIWCCMSTVYLNLEAVCSAKRSNLEKV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00980857;
- 90% Identity
- iTF_00433957;
- 80% Identity
- -