Dalb032074.1
Basic Information
- Insect
- Dermolepida albohirtum
- Gene Symbol
- -
- Assembly
- GCA_031893035.1
- Location
- JAVIWB010006067.1:174383-199490[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.7e-11 5.8e-08 33.4 0.0 1 39 294 333 294 337 0.90 2 4 1.3e-12 1.1e-09 38.9 0.2 1 39 348 386 348 389 0.95 3 4 9.8e-19 8.5e-16 58.5 0.0 1 45 403 448 403 448 0.98 4 4 2.6e-16 2.2e-13 50.7 0.0 1 40 455 495 455 499 0.93
Sequence Information
- Coding Sequence
- ATGCCGGATATAACGGAAGAGTACCAGtcACTGTTAAAAACGGCAgaccaattaaaaataaaaggccTCTGCGAATCGCCGGAGGAAAGAGATAACTCGGACCAACCACCAGATTTCACATTCGGAGGCAGAGGCTATTCGAAAGTCCGCAAAATTGCATCACCTAAACTGTTCAAATCCACagaaaataacagaaaacaCAAATACAGGAAACCGGAAAGAAGAAGATCGCCAGATCATCAggaagaaaataaagagaacAAAGACGCCATTCCATCAAATCATCCGTCAGATGAAGAAAATGACATGCCAGTAGCCTTGGATGAGGAAAGCAGAAAAAGGAAACTAAGCGAAACCATAAGTAAACCGATTAACATGACTAGTCATGGTCCACTGGCAGAACAGACTTTCTCATTCTCTCAGTTCGGTGTGGATAATGATGACTTTCCACCAGAACCACCGGCGCCAACAGCCATTCCCGTAGGAAATATAGAAATGCACGAACACTCACCCACAAGAACGTTACTAACTAACTCTTCAATACATAGGACAGACTTATCAGatTCACACAAATTTTCTGTGGATATAAAGAAGGAAATTATCGATATAAAATTCGAAACCCTTCGATCATACGATGGCGAACAGTCCATATTGGACATGGAAGCCACTCAGATGTCCGGGGCTGATCATTCCATGGACAGCCATGAGGATAATGAACAGGGAATGCATACGATGATGATCACACCAGACATGATGGGAATGATGCCTGGTTCGGGTCCTCACGGACTGGATTCAAACTGTGGcgatttaaatatgaaaagcaATGGTCATTCAGAACATCCGGGATCTGGCAGACACGGAGGAGGACCTAAGACTTGGACCCAAGAAGACATGGACTTAGCACTAGATGCCTTAAAAAATCACAACATGAGTTTAACAAAGGCTTCCGCGACTTACGGCATACCTTCAACGACGTTATGGCAGAGAGCGCATAGACTAGGAATAGATACGCCCAAAAAAGAGGGACCTACAAAATCATGGACGGAGGAAAGTCTGAATTCCGCTCTTGAAGCGCTCAGAACAGGGACAATATCAGCCAATAAAGCAAGTAAAGCTTACGGTATACCCAGTAGTACTCTGTACAAAATTGCAAGGCGGGAAGGTATTAGACTCGCAGCACCGTTTAATGCAGCACCAACGACGTGGACTCCTGAAGATTTAGAAAAAGCCTTAGAATCTATCAGATCTGGACAAACGTCAGTACAAAAAGCTTCCACGGAATTTGGTATACCCACGGGAACACTTTATGGTAGATGTAAAAGAGAAGGCATAGAACTGTCCAGATCGAACCCTACTCCTTGGTCTGAAGATGCAATGGGCGAAGCCTTAGAAGCAGTCAGatTGGGTCACATGTCCATTAATCAAGCCGCAATACACTACAATTTGCCATACTCGTCCCTATACGGAAGATTTAAACGTGGCATAAAATACGAATCCGAAAATTTAGACGTAAATTCGGACAGCCAATCGCATTTAGACGCTCAGGTCCACATGATGGACTATTCCACAAATTCACACCAGCAAATTAATTATCAACAACATCCGTCGAACAGCTGA
- Protein Sequence
- MPDITEEYQSLLKTADQLKIKGLCESPEERDNSDQPPDFTFGGRGYSKVRKIASPKLFKSTENNRKHKYRKPERRRSPDHQEENKENKDAIPSNHPSDEENDMPVALDEESRKRKLSETISKPINMTSHGPLAEQTFSFSQFGVDNDDFPPEPPAPTAIPVGNIEMHEHSPTRTLLTNSSIHRTDLSDSHKFSVDIKKEIIDIKFETLRSYDGEQSILDMEATQMSGADHSMDSHEDNEQGMHTMMITPDMMGMMPGSGPHGLDSNCGDLNMKSNGHSEHPGSGRHGGGPKTWTQEDMDLALDALKNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEESLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRSGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGIKYESENLDVNSDSQSHLDAQVHMMDYSTNSHQQINYQQHPSNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00980857;
- 90% Identity
- iTF_00956226; iTF_01120967; iTF_01120787; iTF_00956411; iTF_01252616; iTF_01498999; iTF_01498797; iTF_00626975;
- 80% Identity
- -