Eame013602.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eumacrocentrus americanus
Gene Symbol
Lrrfip2
Assembly
GCA_018902335.1
Location
JABSMT010054329.1:15-2222[+]

Transcription Factor Domain

TF Family
LRRFIP
Domain
LRRFIP domain
PFAM
PF09738
TF Group
Unclassified Structure
Description
LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.7e-116 3.1e-112 374.8 35.2 1 300 29 326 29 326 0.98
2 3 0.0052 97 2.1 3.2 122 171 326 375 324 379 0.90
3 3 0.042 7.8e+02 -0.8 6.4 193 238 356 400 339 401 0.58

Sequence Information

Coding Sequence
ATGGAGTCAACAGTAGCGGGACGGAGACGTACCGCGACTAGACATTCAGCTGAGGATCAAGCTCTTGATCAAATAGCAAAAGAGGCAGAGGCGAGACTAGCAGCTCGACGACAGGCGAGAGCAGAGGCTAGAGAAATTCGAATGAGGGAATTAGAGAGACAGCAGAAGGAAGCTGAAGAGAATGCTGACAGGGTTTATGACATGTGTAATGTCGATGGAACCAGAACTATGAGGGTGACGCCAGACCCAGTGAGAACTTCTCGTCTCTTGACGAATTCTAATAATTTTCAATCAAGTCGTAGGTCTTCCGAAGATTCATTAGAGGATGCCGGCCTAAACCGGGATTTAAGATTAGAGCTCAAAGAGTTCGAGGAGAAATTTAGAAAAGCAATGATTGCTAACGCCCAACTTGACAATGAAAAATCATCGTACGCTTATCAAGTGGATTTATTGAAAGACAAATTAGAGGAGCTGGAAGAATCGTCAGCGACATTGCGACGTGAACTCAGGGAAAAAAATCGTGAGGCTGAACAGTTGAAACGTGAAAGTCTACGATTGAAGGAGGATTTGGAGTTGTGCAAGACGCAGTTGATAGAAAGAGACACACTTATTCAAGAAAATGGACTGGTTATAGTAGAAGATGAGGGAAGTGAGGGAGAAGAAACTGGAGCAGTTAATGGAATAGTTCACAGAAAGAGAGTACTAGTCAGTACGGAGGCTGCAGAATTGTTACAAAACGCTGGTGAAGGCTCGTTAGACGTTCGGTTGAGGAAGTTTGCTTCGGAGAAGAAAGAACTTCAAGACGAGATACGACACCTAAGATTAGAATTGGAGGAAGCAAAGAGTCGTATAAGATCCGAAAGGTCGTCAGGATCAGTATTAGGATTAGCAGACTCTGAAGATGTTCAAAGGGAAGCAAATAAACTGTTGGCCGATTACAAATTTAAATTACAAAAGGCCGAACAGGATATGTCGACGTTGCAAGCGACTGTCGCAAGATTAGAGAGTCAAGTTATACGTTATAAATCAGCTGCGGAAGCATCAGAGAAGGCGGAAGACGAGCTAAAAGTCGAAAAGCGAAAATTACAGAGAGAAGTCAGAGAATCACAAAGTCGTGTAGAAGAGCTTGAGACAGCGAATTCTCATCTTCAAAGACGACTGGACAAACTGAAAAATGCCAAGTCTGCCCTTTTAAAAGAACTCTGA
Protein Sequence
MESTVAGRRRTATRHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEAEENADRVYDMCNVDGTRTMRVTPDPVRTSRLLTNSNNFQSSRRSSEDSLEDAGLNRDLRLELKEFEEKFRKAMIANAQLDNEKSSYAYQVDLLKDKLEELEESSATLRRELREKNREAEQLKRESLRLKEDLELCKTQLIERDTLIQENGLVIVEDEGSEGEETGAVNGIVHRKRVLVSTEAAELLQNAGEGSLDVRLRKFASEKKELQDEIRHLRLELEEAKSRIRSERSSGSVLGLADSEDVQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVRESQSRVEELETANSHLQRRLDKLKNAKSALLKEL