Mcol004527.1
Basic Information
- Insect
- Meteorus colon
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_030523125.1
- Location
- JAPYZG010000494.1:1974-4340[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.2e-115 2.1e-111 372.0 35.7 1 300 29 327 29 327 0.97 2 3 0.0063 1.1e+02 1.9 3.6 122 172 327 377 325 384 0.89 3 3 0.043 7.6e+02 -0.9 5.5 134 230 360 393 340 402 0.44
Sequence Information
- Coding Sequence
- atggagtCAACAGTAGCAGGGCGAAGACGTGCCGCAACAAGGCACTCAGCTGAGGATCAAGCTCTTGATCAAATAGCAAAAGAGGCGGAGGCGAGATTGGCTGCTCGACGACAAGCAAGAGCTGAGGCTAGAGAAATTCGAATGAGAGAATTGGAGAGACAACAAAAAGAAGCCGAGGAGAACGCCGACAGGGTTTACGATATGTGttcatCCGATAGCACTAGAACTATGAGGGTGACTCCAGATCCAGTGCGAACTTCGCGTCTTCTGAcgaattctaataattttcaatcaagtCGTAGGTCTTCCGAAGATTCATTAGAAGATGCGGGATTAAGCAGGGATATAAGAtTAGAGCTCAAAGAATTGGAGGAGAAATTTAGAAAAGCAATGATAGCTAATGCTCAacttgacaatgaaaaatcatcataCGCTTATCAAGTGGATTTATTAAAAGACAAATTGGAAGAACTGGAGGAATCGTCAGCAACATTGCGGCGAGAATTAAGGGAAAAAAACCGCGAGGCTGATCAACTGAAACGTATGAGTGATCGATTGAATGATGAGATGGAATTATACAAGGCACAATTGTTAGAAAGGGACACTCTCATACAAGAAAATGGATTAGTTATTGTTGAGGATGAAGGaagtgataatgatgaaacagGGGGGACGGCAAATGGAACCATTCATAGAAAGAGAGTACTAGTCAGTACAGAGGCTGcagaattattacaaaatgcTGGTGAAGGATCGTTAGATGTTCGATTGAGGAAATTTGCTtcggaaaagaaagaattgcAGGATGAAATACGACACTTAACGTTAGAGTTGGCAGAAGCTAAGAGTCGTATAAGATCCGAAAGATCGTCAGGATCAGTATTAggATTAGCAGACTCTGAGGACGTTCAAAGGGAAGCAAATAAGTTATTGGCTGATTacaaatttaaattacaaaaagCAGAGCAGGACATGTCAACGCTGCAAGCGACTGTTGCGAGATTAGAGAGTCAGGTTATCCGTTATAAATCCGCAGCAGAGGCATCGGAAAAGGCTGAGGATGaattgaaagttgaaaaaCGTAAATTACAGAGAGAAgTAAGAGAATCGCAAAGTCGTGTTGAAGAATTGGAGACAGCGAATTCTCATCTCCAGAGACGAATGGATAAACTAAAAAATGCAAAGTCAGCTTTATTGAAAGAACTCTGA
- Protein Sequence
- MESTVAGRRRAATRHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEAEENADRVYDMCSSDSTRTMRVTPDPVRTSRLLTNSNNFQSSRRSSEDSLEDAGLSRDIRLELKELEEKFRKAMIANAQLDNEKSSYAYQVDLLKDKLEELEESSATLRRELREKNREADQLKRMSDRLNDEMELYKAQLLERDTLIQENGLVIVEDEGSDNDETGGTANGTIHRKRVLVSTEAAELLQNAGEGSLDVRLRKFASEKKELQDEIRHLTLELAEAKSRIRSERSSGSVLGLADSEDVQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVRESQSRVEELETANSHLQRRMDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_00687172;
- 80% Identity
- -