Basic Information

Insect: Psyttalia lounsburyi
Gene Symbol: Lrrfip2
Assembly: GCA_030522865.1
Location: JAPYZN010005600.1:4689-7034[+]

Transcription Factor Domain

TF Family: LRRFIP
Domain: LRRFIP domain
PFAM: PF09738
TF Group: Unclassified Structure
Description: LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 1.8e-115 6.5e-111 371.4 36.0 1 300 29 324 29 324 0.97

2 3 0.0043 1.6e+02 2.4 2.9 122 171 324 373 322 379 0.91

3 3 0.062 2.3e+03 -1.4 6.1 194 238 355 398 340 399 0.59

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	1.8e-115	6.5e-111	371.4	36.0	1	300	29	324	29	324	0.97
2	3	0.0043	1.6e+02	2.4	2.9	122	171	324	373	322	379	0.91
3	3	0.062	2.3e+03	-1.4	6.1	194	238	355	398	340	399	0.59

Sequence Information

Coding Sequence: ATGGAGTCAACGGTTGCGGGACGGAGGCGTACCGCCACCAGACACTCAGCCGAGGATCAGGCCCTCGATCAAATAGCCAAGGAGGCAGAGGCAAGATTGGCAGCGCGAAGGCAGGCGCGAGCTGAAGCGAGAGAAATTCGGATGAGAGAATTGGAGAGACAGCAGAAAGAGGCTGAGGAGAATGCCGATAGGGTCTACGATATGTGCACCTCCGATGGGAGAACCATGAGGGTCACTCCAGATCCTATTAGAACATCGCGTCTCCTCacaaattcaaataattttcagtcgAGTCGAAGGTCCTCCGAGGACTCCCTGGAGGATGCCGGTCTCAATAGGGACATAAGATTAGAGTTAAAAGAGTATGAGGAAAAATTCCGAAAGGCTATGATTGCCAATGCTCAActtgacaatgaaaaatcctcGTACTCTTATCAAGTGGAGCTGTTGAAGGACAAGTTGGAGGAGTTGGAGGAGTCATCGGCGACTCTGCGACGCGAGCTCAGGGAAAAGAATAGGGAGTCTGAACAACTTAAGCGAGTTAATCAGCGGTTAAAGGAAGAGCTGGAGATTTGCAAAGCTCAATTGCTGGAGAGGGACACACTTATACAGGATAATGGGCTAGTTATAGTTGAGGATGAGGGAAGCGAGGGGGAGGAGACGGGTGGAATGAATGGAGTTAGTAGGAAGAGAGTGCTAGTCAGTACAGAGGCTGCTGAGTTGCTGCAAAATGCTGGGGAAGGCTCATTAGACGTTCGATTGAGAAAGTTTGCGTCGGAGAAGAAGGAATTGCAGGATGAAATAAGACATTTAAGATTAGATTTGGAGGAGGCGAAGAGTCGCAACAGGTCCGAGAGATCGTCGGGATCAATATTAGGTCTGGCCGATTCAGAGGATGTTCAACGAGAAGCCAATAAACTACTCGCAGATTATAAATTTAAACTACAAAAAGCAGAACAGGACATGTCCACACTGCAAGCAACAGTGGCAAGGCTAGAGAGTCAAGTGATTCGTTACAAATCAGCGGCTGAGGCTTCAGAGAAAGCAGAAGACGAGCTGAAGGTTGAAAAGCGTAAATTACAGAGAGAAGTGAGGGAGTCTCAGGGTCGAGTTGAGGAACTAGAGACGGCGAATTCCCACCTTCAGCGGCGCCTTGATAAactgaaaaatgccaagtctGCCCTTCTGAAAGAACTCTGA
Protein Sequence: MESTVAGRRRTATRHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEAEENADRVYDMCTSDGRTMRVTPDPIRTSRLLTNSNNFQSSRRSSEDSLEDAGLNRDIRLELKEYEEKFRKAMIANAQLDNEKSSYSYQVELLKDKLEELEESSATLRRELREKNRESEQLKRVNQRLKEELEICKAQLLERDTLIQDNGLVIVEDEGSEGEETGGMNGVSRKRVLVSTEAAELLQNAGEGSLDVRLRKFASEKKELQDEIRHLRLDLEEAKSRNRSERSSGSILGLADSEDVQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVRESQGRVEELETANSHLQRRLDKLKNAKSALLKEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00305050;
90% Identity: iTF_00687172;
80% Identity: -