Agif004038.1
Basic Information
- Insect
- Aphidius gifuensis
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_014905175.1
- Location
- CM026523.1:19814862-19816945[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-114 3.6e-110 367.3 33.4 1 300 29 325 29 325 0.96 2 2 0.025 2.9e+02 -0.1 5.8 122 172 325 375 324 392 0.80
Sequence Information
- Coding Sequence
- atggagTCAACAGTAGCAGGAAGAAGACGTAATGCAACAAGACATTCTGCTGAAGATCAGGCTCTTGATCAAATAGCAAAGGAGgCAGAAGCAAGATTAGCTGCAAAAAGACAAGCACGAGCTGAAGCTCGAGAAATACGAATGAGGGATTTGGAAAGACAACATAAAGAATCAGAAGAAAATGCTGATAGAGTTTACGATATGTGtacatcTGATGGACCAAGAACACTGAGGGTAACACCAGATCCAATAAGAACAGCTCgattattaacaaattcaaataattttcaatcaaGTCGTAGATCATCAGAAGATTCACTTGAAGATGCTGGTTTAAGCAGAGATTTACGattagaattaaaagaatttgaagaaaaatttcgTAAAGCAATGATTGCAAATGCCCaacttgataatgaaaaatcatcatatgcatatcaagttgatttattaaaagataaattagaAGAATTAGAAGAATCATCAGCAACATTAAGACGTGAACTCAgggaaaaaaatagagaagCTGATCAATTAAAACGTGTCAGTCAACGATTGAAAGAAGATTTAGATATATGCAAAGCACAATTATTAGAACGAGATACTCttattcaaGAAAATGGACTTGTTATTGTGGAAGATGAAGAAAGTGAAAATGAAGAAACAGGTCAAATGAATGGAACTCATAGAAAAAGAGTACTAGTCAGTACAGAAGCTGctgaattattacaaaatgctGGTGAAGGTTCATTGgatgTTCGGTTAAGAAAATTTgcctttgaaaaaaaagaacttcAAGATGAAATAGgacatttaaaattagaaCTTGATGAAGCTAAAAATCGAATGAGATCAGAAAGATCATCTGGTTCAGTATTAGGTCTAgcagataatgatgatattcaACGTGAAGCTAATAAATTACTTgctgattataaatttaaattacaaaaagcTGAACAAGATATGTTGACATTACAAGCAACAGTTGCAAGGCTAGAAAGTCAAGTAATACGTTATAAATCATCAGCTGAAGCATCTGAAAAAGCTGAAGATGAACTTAAAGTTGAAAAACGTAAATTACAACGTGAAgTCAGAGAATCACAGGGTCGTGTTGAAGAACTTGAAACAGCAAATTCACATTTACAAAAACGTCttgataaactaaaaaatgcaaaatcaGCATTATTAAAAGAACTTTGA
- Protein Sequence
- MESTVAGRRRNATRHSAEDQALDQIAKEAEARLAAKRQARAEAREIRMRDLERQHKESEENADRVYDMCTSDGPRTLRVTPDPIRTARLLTNSNNFQSSRRSSEDSLEDAGLSRDLRLELKEFEEKFRKAMIANAQLDNEKSSYAYQVDLLKDKLEELEESSATLRRELREKNREADQLKRVSQRLKEDLDICKAQLLERDTLIQENGLVIVEDEESENEETGQMNGTHRKRVLVSTEAAELLQNAGEGSLDVRLRKFAFEKKELQDEIGHLKLELDEAKNRMRSERSSGSVLGLADNDDIQREANKLLADYKFKLQKAEQDMLTLQATVARLESQVIRYKSSAEASEKAEDELKVEKRKLQREVRESQGRVEELETANSHLQKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_00687172;
- 80% Identity
- -