Alep003428.1
Basic Information
- Insect
- Aleiodes leptofemur
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_963942555.1
- Location
- OZ012610.1:7969223-7972532[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.8e-115 5.8e-111 371.4 35.5 1 300 29 325 29 325 0.97 2 3 0.0052 1.7e+02 2.1 2.6 122 171 325 374 324 377 0.91 3 3 0.034 1.1e+03 -0.5 5.4 193 238 355 399 337 400 0.60
Sequence Information
- Coding Sequence
- ATGGAGTCTACTGTCGCGGGACGGAGGCGTACCGCCACTAGACACTCGGCCGAGGATCAAGCCCTCGATCAAATTGCCAAGGAGGCAGAGGCAAGGCTGGCTGCACGAAGGCAGGCAAGAGCAGAAGCTAGAGAAATTCGAATGAGAGAACTGGAGAGGCAACAGAAAGAAGCTGAGGAGAATGCCGATAGGGTTTACGATATGTGTACTTcTGATGGAAGAACAATCAGAGTTACGCCAGACCCTATTAGAACATCACGTCTTCTaacaaattcaaataattttcaatcaagTCGTAGGTCTTCCGAAGATTCGTTAGAGGATGCTGGTTTAAGCAGAGATATAAGATTAGAACtcaaagaatttgaagagaaattcaGAAAAGCAATGATTGCTAATGCCCAACtcgataatgaaaaatcatcgtatTCTTACCaagttgaattattgaaagatAAATTAGAAGAGTTGGAGGAATCATCGGCGACACTGCGACGTGAActcagggaaaaaaatagagaggcTGAACAACTCAAACGTGTTGGTCAACGGCTAAAAGAAGATTTAGAGCTGTGCAAGGCTCAATTGTTAGAAAGAGATACACTTATacaaGATAATGGACTGGTTATAGTTGAAGACGAAGGAagtgagaatgaagaaaatggtaCAGTTAATGGAATTGTTCACAGGAAGAGAGTACTAGTCAGTACAGAGGCTGCTGAGCTGTTGCAAAATGCTGGTGAAGGATCGTTAGATGttcgattgagaaaattcgCCTCAGAAAAGAAGGAATTGCAGGATGAAATAAGACATTTGAGATTAGAATTAGAGGAGGCAAAGAATCGAATGAGATCCGAGAGATCGTCAGGATCAGTATTagGCTTAGCAGATTCTGAAGATGTTCAACGTGAGGCGAATAAATTATTGGCAGATTACAAATTTAAATTACAAAAAGCTGAGCAGGATATGTCAACGTTGCAAGCAACAGTCGCTAGGTTAGAGAGTCAAGTTATACGTTATAAATCAGCAGCTGAAGCATCAGAAAAAGCTGAGGATGAGCTTAAAGTGGAGAAACGGAAATTACAGAGAGAGgtGAGAGAATCACAGGGTCGTGTTGAGGAGCTTGAGACGGCAAATTCCCATCTTCAACGACGTTTGGATAAACTTAAGAATGCAAAATCTGCACTATTGAAAGAACTCTGA
- Protein Sequence
- MESTVAGRRRTATRHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEAEENADRVYDMCTSDGRTIRVTPDPIRTSRLLTNSNNFQSSRRSSEDSLEDAGLSRDIRLELKEFEEKFRKAMIANAQLDNEKSSYSYQVELLKDKLEELEESSATLRRELREKNREAEQLKRVGQRLKEDLELCKAQLLERDTLIQDNGLVIVEDEGSENEENGTVNGIVHRKRVLVSTEAAELLQNAGEGSLDVRLRKFASEKKELQDEIRHLRLELEEAKNRMRSERSSGSVLGLADSEDVQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVRESQGRVEELETANSHLQRRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_00687172;
- 80% Identity
- -