Ates007745.1
Basic Information
- Insect
- Aleiodes testaceus
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_963565655.1
- Location
- OY751418.1:1645428-1647829[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.8e-115 3.6e-111 371.4 37.0 1 300 29 325 29 325 0.97 2 3 0.0054 1.1e+02 2.1 2.6 122 171 325 374 324 377 0.91 3 3 0.056 1.1e+03 -1.3 5.8 194 238 356 399 344 400 0.58
Sequence Information
- Coding Sequence
- ATGGAGTCTACTGTCGCGGGACGGAGGCGTACCGCCACTAGACACTCGGCCGAGGATCAGGCCCTCGATCAAATTGCCAAGGAGGCAGAAGCAAGGCTAGCTGCACGAAGACAGGCAAGAGCAGAAGCTAGAGAGATTCGAATGAGAGAACTGGAGAGACAACAGAAGGAGGCTGAGGAGAATGCTGATAGGGTTTACGATATGTGTACTTctgATGGGAGAACAATTAGAGTTACACCAGACCCTATTAGAACATCACGTCTTCTCacaaattcgaataattttcaatcaaGTCGTAGGTCTTCCGAAGATTCGTTAGAGGATGCTGGTTTAAGCAGAGATATGAGATTAGAACTCAAAGAATTCGAAGAGAAATTCAGAAAAGCAATGATTGCTAATGCCCAacttgataatgaaaaatcatcgtaCTCATATCaagttgaattattgaaagataAATTGGAGGAATTGGAGGAATCATCGGCGACACTGCGACGTGAActcagggaaaaaaatagagaggcTGAACAACTTAAACGTGTTAGTCAACGGCTGAAAGAGGATTTAGAGCTGTGCAAGGCTCAATTGTTAGAAAGAGACACACTTATACAAGATAATGGACTGGTTATAGTTGAAGACGAAGGaagtgagaatgaagaaaatggttCAGTTAATGGAATTGTTCACAGGAAGAGAGTACTAGTCAGTACAGAGGCTGCTGAGTTGTTGCAAAATGCTGGGGAGGGATCGTTAGatGTTCGATTGAGAAAATTCGCCTCAGAGAAGAAAGAACTGCAGGATGAAATAAGACATTTGAGATTAGAATTGGAAGAGGCAAAGAATCGAATGAGATCCGAGAGATCGTCAGGATCAGTATTagGATTAGCAGATTCTGAAGATGTTCAACGTGAGgcaaataaattattggcagattataaatttaaattacaaaaagCTGAGCAGGATATGTCAACGTTGCAAGCAACAGTCGCTAGGTTAGAGAGTCAAGTTATACGTTATAAATCAGCAGCTGAGGCATCAGAAAAAGCTGAGGATGAGCTTAAAGTGGAGAAACGAAAATTGCAGAGAGAGGTGAGAGAATCACAGGGTCGTGTTGAGGAGCTTGAAACTGCAAATTCTCATCTTCAACGACGTTTGGATAAACTTAAGAATGCAAAATCTGCACTATTGAAAGAACTCTGA
- Protein Sequence
- MESTVAGRRRTATRHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEAEENADRVYDMCTSDGRTIRVTPDPIRTSRLLTNSNNFQSSRRSSEDSLEDAGLSRDMRLELKEFEEKFRKAMIANAQLDNEKSSYSYQVELLKDKLEELEESSATLRRELREKNREAEQLKRVSQRLKEDLELCKAQLLERDTLIQDNGLVIVEDEGSENEENGSVNGIVHRKRVLVSTEAAELLQNAGEGSLDVRLRKFASEKKELQDEIRHLRLELEEAKNRMRSERSSGSVLGLADSEDVQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVRESQGRVEELETANSHLQRRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_00687172;
- 80% Identity
- -