Mcin003749.1
Basic Information
- Insect
- Meteorus cinctellus
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_030523045.1
- Location
- JAPYZF010000083.1:235564-237928[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.4e-115 2.4e-111 371.7 35.5 1 300 29 327 29 327 0.97 2 3 0.0065 1.1e+02 1.8 3.7 122 172 327 377 325 384 0.89 3 3 0.045 7.6e+02 -0.9 5.6 134 230 360 393 340 402 0.44
Sequence Information
- Coding Sequence
- atggagtCAACAGTAGCGGGGCGAAGACGTGCCGCAACAAGGCACTCAGCTGAGGATCAAGCTCTTGATCAAATAGCAAAAGAGGCGGAGGCGAGATTGGCTGCTCGACGACAAGCAAGAGCTGAGGCTAGAGAAATTCGAATGAGAGAATTGGAGAGACAACAAAAAGAAGCCGAGGAGAACGCCGACAGGGTTTAcgatatgtgtacatcCGATAGCACTAGAACTATGAGGGTGACACCAGATCCAGTGCGAACTTCGCGTCTTCTGAcgaattctaataattttcaatcaagtCGTAGGTCTTCCGAAGATTCATTAGAAGATGCTGGATTAAGCAGGGATATAAGAttAGAGCTCAAAGAATTAGAGGAGAAATTTAGAAAAGCAATGATAGCTAATGCTCAacttgacaatgaaaaatcatcataCGCTTATCAAGTGGATTTATTGAAAGACAAATTGGAAGAATTGGAGGAATCGTCAGCAACATTGCGGCGAgaattaagagaaaaaaatcgcgAGGCTGATCAACTGAAACGTATGAGTGATCGATTGAATGATGAGATGGAATTATACAAGGCACAATTGTTAGAGAGGGACACTCTCATACAAGAAAATGGACTAGTTATTGTTGAGGATGAAGGaagtgataatgatgaaacagGAGGGACGGCAAATGGAACTATTCATAGGAAGAGAGTACTAGTCAGTACAGAGGCTGcagaattattacaaaatgcTGGTGAAGGATCGTTAGATGTTCGATTGAGGAAATTTGCTtcggaaaagaaagaattgcaGGACGAAATACGACACTTAACATTAGAGCTGGCAGAAGCTAAGAGTCGCATAAGATCCGAAAGGTCGTCAGGATCAGTATTAGgATTAGCAGACTCTGAGGACGTTCAAAGGGAAGCAAATAAGTTATTGGctgattataaatttaaattacaaaaaGCGGAGCAGGACATGTCAACGCTGCAAGCGACTGTTGCGAGATTAGAGAGTCAAGTTATTCGTTATAAATCCGCAGCAGAGGCATCAGAAAAGGCAGAGGATGAAttaaaagtggaaaaacgtAAATTACAGAGAGAAgTAAGGGAATCGCAAAGTCGTGTTGAAGAATTGGAGACAGCGAATTCTCATCTCCAGAGACGAATGGATAAACTAAAGAATGCAAAGTCAGCTTTATTAAAAGAACTCTGA
- Protein Sequence
- MESTVAGRRRAATRHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEAEENADRVYDMCTSDSTRTMRVTPDPVRTSRLLTNSNNFQSSRRSSEDSLEDAGLSRDIRLELKELEEKFRKAMIANAQLDNEKSSYAYQVDLLKDKLEELEESSATLRRELREKNREADQLKRMSDRLNDEMELYKAQLLERDTLIQENGLVIVEDEGSDNDETGGTANGTIHRKRVLVSTEAAELLQNAGEGSLDVRLRKFASEKKELQDEIRHLTLELAEAKSRIRSERSSGSVLGLADSEDVQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVRESQSRVEELETANSHLQRRMDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_00687172;
- 80% Identity
- -