Aalt017039.1
Basic Information
- Insect
- Aleiodes alternator
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_963921955.1
- Location
- OY998108.1:6848874-6852274[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.1e-115 3.2e-111 372.1 36.3 1 300 29 325 29 325 0.97 2 3 0.0043 1.2e+02 2.4 2.7 122 171 325 374 323 377 0.91 3 3 0.035 9.9e+02 -0.6 5.4 193 238 355 399 337 400 0.60
Sequence Information
- Coding Sequence
- ATGGAGTCTACTGTCGCGGGACGGAGGCGTACCGCCACTAGACACTCGGCCGAGGATCAGGCCCTCGATCAAATTGCCAAGGAGGCAGAGGCAAGGCTGGCTGCACGAAGGCAGGCAAGAGCAGAAGCTAGAGAAATTCGAATGAGAGAACTGGAGAGGCAACAGAAAGAAGCCGAGGAGAATGCCGATAGGGTTTACGATATGTGTACTTcTGATGGAAGAACAATCAGAGTTACACCAGACCCTATTAGAACATCACGTCTTCtcacaaattcaaataattttcaatcaagTCGTAGGTCTTCCGAAGATTCGTTAGAGGATGCTGGTTTAAGCAGAGATATAAGATTAGAACTcaaagaatttgaagagaaattcagaaaagcAATGATTGCTAATGCCCAacttgataatgaaaaatcatcgtaTTCTTACCaagttgaattattgaaagataAATTAGAAGAGTTGGAGGAATCATCAGCGACACTGCGACGTGAACtcagggaaaaaaatagagaggcTGAACAACTTAAACGTGTTAGTCAACGGCTAAAAGAAGATTTAGAGCTGTGTAAGGCTCAATTGTTAGAAAGAGACACACTTAtacaaGATAATGGACTGGTTATAGTTGAAGACGAAGGAAGTGAGAATGAAGAAACTGGTACAGTTAATGGAATTGTTCACAGGAAGAGAGTACTAGTCAGTACAGAGGCTGCTGAGCTGTTGCAAAATGCTGGTGAGGGATCGTTAGATGTTCGATTGAGGAAGTTCGCCTCAGAGAAGAAGGAATTGCAGGATGAAATAAGACATTTGAGATTAGAATTGGAAGAGGCGAAAAATCGAATGAGATCCGAGAGATCGTCAGGATCAGTATTAGGCTTAGCAGATTCTGAAGATGTTCAACGTGAGGCGAATAAATTATTGGCAGATTACAAATTTAAATTACAAAAAGCTGAGCAGGATATGTCAACGTTGCAAGCAACAGTCGCTAGGTTAGAGAGTCAAGTTATACGTTATAAATCAGCAGCTGAAGCATCGGAAAAAGCTGAGGATGAGCTTAAAGTAGAGAAACGGAAATTGCAGAGAGAGgTGAGAGAATCACAGGGTCGTGTTGAGGAGCTAGAGACGGCAAATTCCCATCTTCAACGACGTTTGGATAAACTTAAAAATGCAAAATCTGCACTATTGAAAGAACTCTGA
- Protein Sequence
- MESTVAGRRRTATRHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEAEENADRVYDMCTSDGRTIRVTPDPIRTSRLLTNSNNFQSSRRSSEDSLEDAGLSRDIRLELKEFEEKFRKAMIANAQLDNEKSSYSYQVELLKDKLEELEESSATLRRELREKNREAEQLKRVSQRLKEDLELCKAQLLERDTLIQDNGLVIVEDEGSENEETGTVNGIVHRKRVLVSTEAAELLQNAGEGSLDVRLRKFASEKKELQDEIRHLRLELEEAKNRMRSERSSGSVLGLADSEDVQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVRESQGRVEELETANSHLQRRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_00687172;
- 80% Identity
- -