Ajap012175.1
Basic Information
- Insect
- Asobara japonica
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_017141405.1
- Location
- JADHZF010000100.1:877989-880832[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.6e-116 4.7e-112 374.9 34.4 1 300 29 325 29 325 0.97 2 3 0.0036 1.1e+02 2.6 2.7 122 172 325 375 323 381 0.91 3 3 0.061 1.8e+03 -1.4 5.9 195 238 357 399 345 400 0.58
Sequence Information
- Coding Sequence
- ATGGAGTCAACGGTAGCGGGACGAAGGCGTACCGCCACCAGACACTCTGCTGAGGACCAGGCCCTCGATCAAATAGCCAAGGAGGCGGAAGCAAGACTGGCGGCGAGAAGGCAAGCTAGGGCGGAGGCCCGGGAGATCCGAATGAGAGAATTGGAGAGGCAGCAGAAAGAGGCTGAGGAAAATGCGGACAGAGTATATGACATGTGTACATCCGATGGGCGTACAATGAGGGTAACACCAGATCCCATTCGAACCTCTCGACTCCTCACCAATTCCAATAATTTTCAATCGAGTCGAAGGTCCTCGGAGGACTCCCTGGAGGACGCAGGTCTGAGCAGGGACATGAGATTAGAACTTAAGGAATTTGAGGAGAAATTCAGGAAGGCGATGATCGCTAACGCTCAACTGGACAATGAAAAGTCTTCGTACTCGTATCAGGTGGAGTTGCTGAAGGATAAGCTTGAGGAGCTAGAGGAGTCATCGGCGACTCTGAGGCGCGAGCTCCGAGAGAAAAATAGAGAGTCCGAGCAACTGAAGCGAGCCAGTCAGCGGTTGAAGGAAGAGCTGGAAGTCTGTAAGGCACAGTTATTGGAGAGGGACACGCTTATACAGGATAATGGGCTTGTTATTGTCGAGGATGAGGGTAGTGAGGGCGAGGAGTTAGGCCCTATCAATGGTGGAGTCAACAGGAAGAGAGTGCTAGTCAGTACAGAGGCTGCTGAGCTCCTGCAAAATGCTGGGGAAGGCTCACTAGACGTTCGATTGAGAAAATTTGCCTCGGAGAAGAAGGAACTTCAGGACGAAATAAGGCATTTAAGATTAGATTTGGAGGAGGCTAAAAATCGAAGTAGATCCGAAAGATCGTCTGGATCAGTATTAGGTCTAGCGGATTCTGATGACGTTCAACGAGAGGCGAATAAATTACTTGCAGATTATAAATTTAAATTGCAAAAAGCCGAGCAGGATATGTCCACTCTACAGGCAACTGTTGCGAGGCTAGAGAGCCAAGTGATTCGTTATAAATCGGCGGCTGAGGCGTCAGAAAAAGCAGAAGATGAGCTCAAAGTAGAAAAACGGAAATTGCAGAGAGAAGTGAGAGAATCCCAGGGTCGCGTGGAGGAGCTCGAAACGGCGAATTCTCACCTCCAGCGGCGTCTCGACAAGCTAAAAAACGCCAAGTCTGCCTTATTGAAGGAACTTTGA
- Protein Sequence
- MESTVAGRRRTATRHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEAEENADRVYDMCTSDGRTMRVTPDPIRTSRLLTNSNNFQSSRRSSEDSLEDAGLSRDMRLELKEFEEKFRKAMIANAQLDNEKSSYSYQVELLKDKLEELEESSATLRRELREKNRESEQLKRASQRLKEELEVCKAQLLERDTLIQDNGLVIVEDEGSEGEELGPINGGVNRKRVLVSTEAAELLQNAGEGSLDVRLRKFASEKKELQDEIRHLRLDLEEAKNRSRSERSSGSVLGLADSDDVQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVRESQGRVEELETANSHLQRRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_00687172;
- 80% Identity
- -