Echr003523.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Epirrita christyi
Gene Symbol
-
Assembly
GCA_951392215.1
Location
OX595836.1:5523395-5532876[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 24 0.0056 0.38 12.0 1.5 3 23 676 697 675 697 0.96
2 24 5.9 4e+02 2.5 1.1 4 23 1068 1089 1066 1089 0.84
3 24 0.092 6.3 8.2 0.6 1 21 1094 1114 1094 1115 0.96
4 24 9.9 6.7e+02 1.8 0.4 1 23 1155 1178 1155 1178 0.90
5 24 0.00035 0.024 15.8 0.9 3 21 1189 1207 1189 1208 0.96
6 24 0.43 30 6.1 0.5 2 23 1216 1238 1215 1238 0.93
7 24 0.12 8.4 7.8 0.7 3 23 1257 1278 1255 1278 0.92
8 24 0.0024 0.16 13.2 2.1 1 23 1283 1306 1283 1306 0.93
9 24 0.18 12 7.3 0.0 1 23 1332 1355 1332 1355 0.90
10 24 0.1 6.9 8.1 3.0 1 23 1360 1382 1360 1382 0.97
11 24 0.019 1.3 10.4 0.8 1 23 1388 1411 1388 1411 0.96
12 24 0.011 0.76 11.1 0.9 1 23 1425 1447 1425 1447 0.97
13 24 0.00025 0.017 16.3 1.8 1 23 1499 1522 1499 1522 0.97
14 24 0.0049 0.33 12.2 0.9 1 23 1582 1605 1582 1605 0.95
15 24 0.0028 0.19 13.0 1.5 2 23 1634 1656 1633 1656 0.95
16 24 0.12 8.3 7.8 0.1 2 23 1662 1684 1661 1684 0.93
17 24 0.0092 0.62 11.4 0.3 1 21 1728 1748 1728 1749 0.95
18 24 0.0017 0.12 13.6 0.6 1 23 1759 1781 1759 1781 0.93
19 24 0.00015 0.01 17.0 0.4 2 23 1871 1893 1870 1893 0.93
20 24 4.7e-07 3.2e-05 24.9 1.4 3 23 1900 1920 1899 1920 0.98
21 24 0.0075 0.51 11.6 0.4 1 23 1940 1962 1940 1963 0.95
22 24 0.48 33 6.0 0.0 1 23 1984 2006 1984 2006 0.97
23 24 0.019 1.3 10.4 0.6 1 23 2012 2035 2012 2035 0.96
24 24 0.00052 0.035 15.3 0.4 1 23 2043 2066 2043 2066 0.96

Sequence Information

Coding Sequence
ATGACTGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTCCCTACCACCAGTTCGGATGACTTGGAACCTACCATCCTTGCTTCAAAAATAAAGGATTGTGTGTCTGTACAGATAAACGAAAATGACGACCTGCCGACGAATGTCTGCAGGAAATGCGTGGACAATGTCAACAACTGGCATTTATTCAAGACTGTATGTGCAAAGACACAAAACAAACTACTGTCTCTCATAAGAAAGGATGGAAGCCTACTAGAAGAGGTGCATATCAAAAGTGAACCCTATTCTGATGAGGCTTATGATGATGGAGTGGTTATTGACGGCTCATACCCTGAAGCTGAGAATGTGGGCTCATCGAGTAAGCTACAGCCTGAAGGGCCCCCGATCTTGGCGTCATTGGGACTCACTCCGCGGAGCGATAAGAAATGTGTGGATCCACGAATGGATTGGCACCGAGTCCATGCAATATTGGATATGGTTCAAGAGAGCAAAGTGATTGATTCACTCCAATCCGTTGAAGAGAGTGATGTTTTGCACCACTCCGACCATGAGTCTGACTCAGAGACGGAACTCCATCATGATCTAGATGATATTTTCATTGATTGTAAAAATGGCTATGCTTgtagaaacaaaaaaatcttAACCAACAATCCTCAAAGAGTCAGCTCAGGACCTAAAGATTCTGTAAAAGTGAAAAAACGAAAAGTCGATGTCTATAAACATTGTGGTAAACCCAAAAGTGCTTGGCAGCTACTGTTTACGGATGATCTACTCGATCTCATTGTCTCATCAACAAACGAAAACATACTCCGACATGGCAAAGACTTCAAAGGGTCCACCAATGTTGGTGAAGTCAAAACTCTAATTGGAATTTTGTATTTGAACGGAATAATGAGGCCAACTCATCAGAAATGCAGTGACCTCTGGGACAAAGACTGCGGCGTCCCGTCCGTTGTAAATGTAATGACAAACGAGCGTTTCAACTTTCTTATTCAAAACATCTGTTTCTATAGCCAAGAGGATGACGATAGCATAATGCAGTTCGATACGATGAAACGAATTCGCAAAGTGTTTGAAATCTTCGCCATGAACTGCAGAACAACCTTCGACGTCGAGAGTACCGCCGTCGTTGATGAGATCATTGTGCCAGTTTATGGACCTTGCCCGTTTCGATACGATATCGATAAGAAACCACTGAAACAAGGAGTTAAAATGGTATTGCTTGTTGATCCAAATAATTTCTATGTGAGCAATTTGGACGTGATTACCGATCCGTATTTCGGTGCTGAGGAGATTGTGAAAAAAATCACTCAACATTTGTATGGTACTGGGAAAACAATCATAATGGATAGCTGGTACTTTTCCTCCAAGTTGATGAATACGCTGAAGAATTACCAGCTCTATACGATTGCGGCGTTGCACCCAAAGAGCGATGACATACCTCCATTGTTTCTATCACAGTACAGAAAAAGCTGTACGTACATTTCTGGATTCGTAGACGGTGAAGTCTCGTTGACATCTCGCGTAAACTCACAGTCGAAAGCGACCAACGTCGTAACAAACGAGCCACAGTTTTATCGGAAAGGTCACACGAACCGTACAACATCGGTATCAGCATATAAAAAGAATCAATCAGCAGTGGAAGTTCTGGATGTCCTGATGCATTATTATACAACATTGCAAAATACGAACGATTGGACACTTTCATTGTTCTTTACATTGCTCAATATTGCTTCGGTCAATGCTCAAGTTATATGGAGCTCACGAAATTCTACAGTGACTCCACGGCGTTCATTTATCAGAGATTTGGGTTTGGGTCTGATGGAGGATGAGGGGCTGGAAAGTGAGAAAGATGAAGAAGATGATTACGAAGACGAGGTGAAAGCCCCTCAACCGGTAAAGGTCCCGCACATGCCTGAAGTCTCCATCACCGTGATGCGGCCCACCGGCGAGACGCTCCACTCCCGCCAAGGTATCCAACAGATAGCGTCCAAGGACTGCCTCATCTGCGGCCGCTCCTACAGATACTCGCACAACGCGAGGCGACACGAGCTCACATCACACAAATTCGACCGCTACACCAACAAattaaacagcaaaaaatcacACTCGCACATGCAACCCAAACTCAGACCCAACCCTTTCAATCCGAAATCGAGACTTATGCCCAATCCCATCAGCCATAAAATGCAATTACTGCCCAAAATCATGCCGAGACTGATGCCGCAACTCAACTCtcaaatcaacaaaaaaattataactccACCGAAACCGATACCCATTAAATCATCAAAGACACCACAGAACAATTTGCCGTATCCGTTACGCATCAAAGCCCTCAAAGATTTGCAAATAAAGAAGAAGGAACCGCAGATTTTGAAAAGGTTACTCACATCGAAACCTGAGGTTCTGGTATCGGAACCAGAGATAATGAACTCGGGGCCAGAAAGCCCTGAAACTCTGATATCTGAGCCTGAAATTGCGTCATTCCAAGTTGAGGCGATTCTTTCGGAGCCCAACGATTACGATGAACATCAAGAAGAGGATGACTCTGAAGTGCATACCAATCAGAGCCAAAATTATGACACCGTCGATATGGACTCTGAAAATGAAATAGAAATTGCACGACAGCAGGAGAACGTCGATGAGACTGAAGAAAATCATGATGAAGATGAAAATACTCCGCATGACGAGGAAAATAACTTTGAAGAAACCGACAAAGTAGGAGTCAATGCAAGTGAAAAAGAAATCATTCCCGAAGAAGCAGCTCTCGGTGAGGAAGGCAATGGAGATATGGATGTTGATGAAAATTACGAAGCCAAAGACGATGAACATactaatgaagaagaagaaggaaaTGAGGAAGGCGAGAATGAAGAACTACAGGCCAGTCAAGGGGCTGAAGAAAACGAAGAAGATGAAGACCATCAGCCGACCACACTAGCGCCGGATGTAGAGTTAAACGAAGATATGCACCACAACTCCAACACTTTCAATAGCGAGATGAACGACGAAGAAGAAGAACCGGACGAAAGCGCCGAGTTCAATGATACTGTTGACGGTGAAAGCACCGCCAAGGTACTTGATCCTGATAAAACGTACGTTACCAACTCTCAGAAAGACTTCATCAAAAGATACCGTGATATTATCCTTCAGATCAACACAAAGAGATGTCTGTGTTGCGATAAAGAATATCCGCGCAGAAAAGCTGTCATACAACATCTACAGAAAAATGGACACAAAGTTCCAAAACATACTTGCTACAATTGCGTCGTTACTTTTACCCATATTGGCGCTTTACTCAGTCACATGAGACAAAACTCTTGCACCGATCTGTGGAAGATAATCTACGACGAGAATGGTATCACGAGCGACATGATCATTGAGGAACCCAAGAGCAAAATCCAAGCCAAAGATATTTTCAATGCAAAATCTTATGCGTGTAGATTGTGCCCTGCAAAATTCCAGCTAAAGCAATCTATCATGAAGCATGTTTCTGAGTTCCACGAAGATGGTCAGTCGGCAGTTCCTCTTGGCTGCGTACACTGCGGAGCCTCCTTCAAAGATAAAACTTTGCTCAAGAAACATATCCGCAACGGCGATTGTACTGTTTATATTCATTGTGATTTATGCTCTGAACAATTCACCAACATGCAAGAATTTAACGATCATGCACTGTCCGCTCACACTGAGCACTTTGTCAAAACAGAAAATCAAAGCGTAGATGGACGACTCACAGACTGCTATCTTTGTGGGATGAAGACAAGCAGCTATACAAATTTGCTCAAACATTTCAAAGCGGTGCACGATGAAATACCGCATCACTGCCAGTTTTGTGGTGTCAAATTTGAACAACCTGTTGATTTAAACAAACACATGTACCTGGAACATCCTGGTCAAACTCCAGACATGCAGACCACTCAACCAGACATGTCACTCGTCAAAGAAGAAGCTGAGGAATACCACTACTCTTGCACGGAGTGCAATGCAATATTTGAAACTGTAGACGCATGGACTGATCACCAAGTAGCTGAACATAACCAAGTGGCGCACCACTGCGATCAATGTGCGAAGAAATTCTTGCGGCCCTCGGAGCTTGCAGAGCACAAGAACACTCACTTGAGAGTCAAATTCTATCCTTGCAGCATATGCTCTAATTCTTACAGCACTCCACAAAAGTTGGCTGACCACGTCCAAAACTGTCATCCTGGTGCTGGTGCGTCTCAGATCAACGCAGACAATGAATTTTTCTGCGATATTTGTATTCGAGGCTTTAAAAGTCGTCAGGCTTACTCGAATCATATGCGTATTCATGCAAAAGTGCCGACCACCAACAGAAAGCCCGGTGAACCTAAGGGATTCGACCCGCGCATCATCGGGAAACCCATCAAGCAATTCACTATGTCCAATGTGGTACAACCTggttttattaatttcaaaCCAAATGCGAATGTTCCTAATGCTCCTTATTCGTGTGATATTTGTGGCAAAGGCTTCATGCACAAGAAAAATATTTGGAAACACAAAAAAGTGTTGCATGCCGATATTATAAACGACAGAAACGACAGTGAAGAAAACACGATGCACGCCTCAACCGAAGAAGACGAATATAATGTTGATGAAAATGGCGTATTACTTTCAACGCCACAGTTTAACAGTTTTAATTTTACCAATTTTACTAATAATGTGGTGCAGCCTCCGCCAGATCCTATGCCTTTCGCTTGCGAGTTATGTTCCAAGCGATTCCCGCTTAGGACTAGTCTGTGGAAGCACAAACGCGCTAAGCATGGAATAACAAATGCAAATCCCAGCGGTAGTGGCGATGCGCAAACACAAGCAGCGCCTAGTGAAGGCCAAGGTGGTGGTCGATCTAGCTGTACCATTTGTAAAATTACATTCGCAGACAAAAAATCTTACTATCGTCATAGAAAGAACGTTCACAAATCAGCGACACAAATGTGTAAGATATGTGGCAAGCCACTGAATTCCACTCTGGAGCTGTACGAACATCTAAAAGCAGCGCACGCTAGAGAGTTGCTTGGGTACAATGCCAATCAAAGTACAAGTAAAGCTCAGGATGTATCACAAGATATGGACGGGGAATTTGAAAACGACCAAGATACTGTAGATCCTAGCGTTGACTATCAAGCACGGTATCCGTGCGATACTTGTGGCAAACAGTTTGTGGGACTACTCTCTTTGCAAAATCATCAGTGTATAAATCAAGTACCCTCGCAACCTCAGACTTTCGACTGCGAAAtctgtcacaaaagctacactTCCATCGCCGCATTAAAAAGTCATCGCGGTTGGCATCTTCGATCGCCCGATGGGAAGGCGGCTGCTAACAATAGTGGTCTATGGATGCCCCAGCACAAGGTCACCAGCAAAGTCAGCAAACATGAAGTTGTAGAACCTGCCACACCGACAGTCACCACTCGACTCCAACAATCGACCCCTGCAGCCGTGGCCAAAAGGAGATTGCCCCCCGAAGTGGAAGTGACTGTCGTAAATCCTAACAAAAAGATGCGCTCGGACGATTCCGTCGAGATGGACCAGCAAGGCGAAGCTATCGAAGGGAAATACTGTACGATATGTGACAAAGAGTTCACTAAACGAGCGGCGTATCAACGCCACATGGACGAGGTCCATCAGCCGAATTCTGTTTTTTGTCCAGTCTGCGATAAGAGTTTTACACGAAAATCGACTCTGCTAGTGCACATGAAAAAGCACTACGAAGGTGGCGGGGAGGGTAGTTCTTCGACAGCGCAGGTGGACGAAGATGAAGGCTTCTCGTGTGACCTCTGCGGCGCGCAGTACGACACTGAGAACGCTTTGAGGGCGCATCGGATCAGACATCACGGGGAGGAATCGGGGGATTCGGAGGATGATGGTCAAGTGCCTATCGCACAGCCTGGGGAGTTCACATGTGGCCAGTGTGGGGACGGTGTCGCTACCGCTCGCGATCTTATCACGCATCGCGCCATACATTCTACACCTACTAAATTCTACTGTAACATATGCAAAGTGTACTTCGTGAGGGCACTGGACCTGTCCTCGCACACGCGCGCGCGACACGCAGACAATGAGAAGGTGTTCTTTCCGTGTGCCATGTGTGATCGCTTCTATATGAACAAGAAGAGTTTACAACGACACATCGACATGGCCCACTGA
Protein Sequence
MTVNYDRVCRLCLSSRGELLPIFPTTSSDDLEPTILASKIKDCVSVQINENDDLPTNVCRKCVDNVNNWHLFKTVCAKTQNKLLSLIRKDGSLLEEVHIKSEPYSDEAYDDGVVIDGSYPEAENVGSSSKLQPEGPPILASLGLTPRSDKKCVDPRMDWHRVHAILDMVQESKVIDSLQSVEESDVLHHSDHESDSETELHHDLDDIFIDCKNGYACRNKKILTNNPQRVSSGPKDSVKVKKRKVDVYKHCGKPKSAWQLLFTDDLLDLIVSSTNENILRHGKDFKGSTNVGEVKTLIGILYLNGIMRPTHQKCSDLWDKDCGVPSVVNVMTNERFNFLIQNICFYSQEDDDSIMQFDTMKRIRKVFEIFAMNCRTTFDVESTAVVDEIIVPVYGPCPFRYDIDKKPLKQGVKMVLLVDPNNFYVSNLDVITDPYFGAEEIVKKITQHLYGTGKTIIMDSWYFSSKLMNTLKNYQLYTIAALHPKSDDIPPLFLSQYRKSCTYISGFVDGEVSLTSRVNSQSKATNVVTNEPQFYRKGHTNRTTSVSAYKKNQSAVEVLDVLMHYYTTLQNTNDWTLSLFFTLLNIASVNAQVIWSSRNSTVTPRRSFIRDLGLGLMEDEGLESEKDEEDDYEDEVKAPQPVKVPHMPEVSITVMRPTGETLHSRQGIQQIASKDCLICGRSYRYSHNARRHELTSHKFDRYTNKLNSKKSHSHMQPKLRPNPFNPKSRLMPNPISHKMQLLPKIMPRLMPQLNSQINKKIITPPKPIPIKSSKTPQNNLPYPLRIKALKDLQIKKKEPQILKRLLTSKPEVLVSEPEIMNSGPESPETLISEPEIASFQVEAILSEPNDYDEHQEEDDSEVHTNQSQNYDTVDMDSENEIEIARQQENVDETEENHDEDENTPHDEENNFEETDKVGVNASEKEIIPEEAALGEEGNGDMDVDENYEAKDDEHTNEEEEGNEEGENEELQASQGAEENEEDEDHQPTTLAPDVELNEDMHHNSNTFNSEMNDEEEEPDESAEFNDTVDGESTAKVLDPDKTYVTNSQKDFIKRYRDIILQINTKRCLCCDKEYPRRKAVIQHLQKNGHKVPKHTCYNCVVTFTHIGALLSHMRQNSCTDLWKIIYDENGITSDMIIEEPKSKIQAKDIFNAKSYACRLCPAKFQLKQSIMKHVSEFHEDGQSAVPLGCVHCGASFKDKTLLKKHIRNGDCTVYIHCDLCSEQFTNMQEFNDHALSAHTEHFVKTENQSVDGRLTDCYLCGMKTSSYTNLLKHFKAVHDEIPHHCQFCGVKFEQPVDLNKHMYLEHPGQTPDMQTTQPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCAKKFLRPSELAEHKNTHLRVKFYPCSICSNSYSTPQKLADHVQNCHPGAGASQINADNEFFCDICIRGFKSRQAYSNHMRIHAKVPTTNRKPGEPKGFDPRIIGKPIKQFTMSNVVQPGFINFKPNANVPNAPYSCDICGKGFMHKKNIWKHKKVLHADIINDRNDSEENTMHASTEEDEYNVDENGVLLSTPQFNSFNFTNFTNNVVQPPPDPMPFACELCSKRFPLRTSLWKHKRAKHGITNANPSGSGDAQTQAAPSEGQGGGRSSCTICKITFADKKSYYRHRKNVHKSATQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQSTSKAQDVSQDMDGEFENDQDTVDPSVDYQARYPCDTCGKQFVGLLSLQNHQCINQVPSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVEPATPTVTTRLQQSTPAAVAKRRLPPEVEVTVVNPNKKMRSDDSVEMDQQGEAIEGKYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYEGGGEGSSSTAQVDEDEGFSCDLCGAQYDTENALRAHRIRHHGEESGDSEDDGQVPIAQPGEFTCGQCGDGVATARDLITHRAIHSTPTKFYCNICKVYFVRALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIDMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01100003; iTF_01183137; iTF_00377314; iTF_01219974; iTF_00361842; iTF_00856885; iTF_00119800; iTF_01528507; iTF_00661539; iTF_01529391; iTF_00662420; iTF_01171653; iTF_01170784; iTF_00737682; iTF_00267412; iTF_00909877; iTF_00638839; iTF_00811255; iTF_01429244;
90% Identity
iTF_01100003;
80% Identity
-